BLASTX nr result

ID: Cnidium21_contig00002416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002416
         (1083 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568902.2| ubiquitin carrier protein 7 [Arabidopsis thalia...   178   2e-42
gb|AAL86003.1| putative E2, ubiquitin-conjugating enzyme UBC7 [A...   178   2e-42
sp|Q42540.1|UBC7_ARATH RecName: Full=Ubiquitin-conjugating enzym...   178   2e-42
ref|XP_002263503.1| PREDICTED: ubiquitin-conjugating enzyme E2 1...   177   4e-42
ref|XP_002284116.1| PREDICTED: ubiquitin-conjugating enzyme E2 7...   177   5e-42

>ref|NP_568902.2| ubiquitin carrier protein 7 [Arabidopsis thaliana]
            gi|28973769|gb|AAO64200.1| putative E2,
            ubiquitin-conjugating enzyme UBC7 [Arabidopsis thaliana]
            gi|332009785|gb|AED97168.1| ubiquitin carrier protein 7
            [Arabidopsis thaliana]
          Length = 203

 Score =  178 bits (452), Expect = 2e-42
 Identities = 81/115 (70%), Positives = 93/115 (80%)
 Frame = +3

Query: 690  GYFNAIMSFXXXXXXXXXXVRFTSEMWHPNVYSNGKVCISILHPPGEDPNGYELASERWT 869
            G+FNAIM+F          VRFTS+MWHPNVYS+G+VCISILHPPG+DP+GYELASERWT
Sbjct: 89   GFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWT 148

Query: 870  PVHTVEXXXXXXXXXXXXPNDESPANIDAAKQWRDKKDEFKKKVSRCVRRSQEMF 1034
            PVHTVE            PNDESPAN++AAK+WRDK+DEFKKKVSRCVR+SQEMF
Sbjct: 149  PVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVSRCVRKSQEMF 203


>gb|AAL86003.1| putative E2, ubiquitin-conjugating enzyme UBC7 [Arabidopsis thaliana]
          Length = 187

 Score =  178 bits (452), Expect = 2e-42
 Identities = 81/115 (70%), Positives = 93/115 (80%)
 Frame = +3

Query: 690  GYFNAIMSFXXXXXXXXXXVRFTSEMWHPNVYSNGKVCISILHPPGEDPNGYELASERWT 869
            G+FNAIM+F          VRFTS+MWHPNVYS+G+VCISILHPPG+DP+GYELASERWT
Sbjct: 73   GFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWT 132

Query: 870  PVHTVEXXXXXXXXXXXXPNDESPANIDAAKQWRDKKDEFKKKVSRCVRRSQEMF 1034
            PVHTVE            PNDESPAN++AAK+WRDK+DEFKKKVSRCVR+SQEMF
Sbjct: 133  PVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVSRCVRKSQEMF 187


>sp|Q42540.1|UBC7_ARATH RecName: Full=Ubiquitin-conjugating enzyme E2 7; AltName:
            Full=Ubiquitin carrier protein 7; AltName:
            Full=Ubiquitin-protein ligase 7 gi|992704|gb|AAC49321.1|
            UBC7 [Arabidopsis thaliana] gi|9759251|dbj|BAB09775.1|
            ubiquitin-conjugating enzyme UBC7 [Arabidopsis thaliana]
          Length = 166

 Score =  178 bits (452), Expect = 2e-42
 Identities = 81/115 (70%), Positives = 93/115 (80%)
 Frame = +3

Query: 690  GYFNAIMSFXXXXXXXXXXVRFTSEMWHPNVYSNGKVCISILHPPGEDPNGYELASERWT 869
            G+FNAIM+F          VRFTS+MWHPNVYS+G+VCISILHPPG+DP+GYELASERWT
Sbjct: 52   GFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWT 111

Query: 870  PVHTVEXXXXXXXXXXXXPNDESPANIDAAKQWRDKKDEFKKKVSRCVRRSQEMF 1034
            PVHTVE            PNDESPAN++AAK+WRDK+DEFKKKVSRCVR+SQEMF
Sbjct: 112  PVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVSRCVRKSQEMF 166


>ref|XP_002263503.1| PREDICTED: ubiquitin-conjugating enzyme E2 13 [Vitis vinifera]
            gi|297740393|emb|CBI30575.3| unnamed protein product
            [Vitis vinifera]
          Length = 168

 Score =  177 bits (449), Expect = 4e-42
 Identities = 82/114 (71%), Positives = 91/114 (79%)
 Frame = +3

Query: 690  GYFNAIMSFXXXXXXXXXXVRFTSEMWHPNVYSNGKVCISILHPPGEDPNGYELASERWT 869
            G+FNAIMSF          VRFTS+MWHPNVY +G+VCISILHPPGEDPNGYELASERWT
Sbjct: 54   GFFNAIMSFPPNYPNSPPSVRFTSDMWHPNVYPDGRVCISILHPPGEDPNGYELASERWT 113

Query: 870  PVHTVEXXXXXXXXXXXXPNDESPANIDAAKQWRDKKDEFKKKVSRCVRRSQEM 1031
            PVHTVE            PNDESPANI+AAK+WR+K+DEFKKKVSRCVR+SQEM
Sbjct: 114  PVHTVESIVLSIISMLSSPNDESPANIEAAKEWREKRDEFKKKVSRCVRKSQEM 167


>ref|XP_002284116.1| PREDICTED: ubiquitin-conjugating enzyme E2 7 isoform 1 [Vitis
            vinifera]
          Length = 170

 Score =  177 bits (448), Expect = 5e-42
 Identities = 81/115 (70%), Positives = 91/115 (79%)
 Frame = +3

Query: 690  GYFNAIMSFXXXXXXXXXXVRFTSEMWHPNVYSNGKVCISILHPPGEDPNGYELASERWT 869
            G+FNAIMSF          V+FTSE+WHPNVY +G+VCISILHPPGEDPNGYELASERW 
Sbjct: 56   GFFNAIMSFPPNYPNSPPTVKFTSEVWHPNVYPDGRVCISILHPPGEDPNGYELASERWM 115

Query: 870  PVHTVEXXXXXXXXXXXXPNDESPANIDAAKQWRDKKDEFKKKVSRCVRRSQEMF 1034
            P+HTVE            PNDESPANI+AAK+WRD++DEFKKKVSRCVRRSQEMF
Sbjct: 116  PIHTVESIVLSIISMLSSPNDESPANIEAAKEWRDRRDEFKKKVSRCVRRSQEMF 170


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