BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002408
         (1535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum]              751   0.0  
gb|ABB87120.1| ribosomal protein L3-like [Solanum tuberosum]          750   0.0  
ref|NP_001233997.1| ribosomal protein L3 [Solanum lycopersicum] ...   750   0.0  
emb|CBI18223.3| unnamed protein product [Vitis vinifera]              746   0.0  
ref|XP_002265125.1| PREDICTED: 60S ribosomal protein L3-like [Vi...   746   0.0  

>gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum]
          Length = 389

 Score =  751 bits (1938), Expect = 0.0
 Identities = 358/384 (93%), Positives = 375/384 (97%)
 Frame = -1

Query: 1442 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIVREVEKPG 1263
            KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP KPCKLTAFLGYKAGMTHIVR+VEKPG
Sbjct: 5    KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVRDVEKPG 64

Query: 1262 SKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEDIKRRFYKNWCK 1083
            SKLHKKETCEAVTI+ETPPMVIVGVV YVKTPRGLR LNTVWAQHLSE++KRRFYKNWCK
Sbjct: 65   SKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEELKRRFYKNWCK 124

Query: 1082 SKKKAFTKYSRKYESDEGKKDIQSQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHLMEI 903
            SKKKAF KYS+KYESDEGKKDIQ+QLEK+KKYA VIRVLAHTQIRKMKGLKQKKAHLMEI
Sbjct: 125  SKKKAFLKYSKKYESDEGKKDIQTQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAHLMEI 184

Query: 902  QVNGGSIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 723
            QVNGG+IAQKVDFAYGFFEKQVP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK
Sbjct: 185  QVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244

Query: 722  THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKLGKTGQENHTAITEFDR 543
            THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKK+YKLGK GQE+H A+T+FDR
Sbjct: 245  THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKLGKAGQESHAAVTDFDR 304

Query: 542  TEKDITPMGGFPHYGEVKDDYLLIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKIKFID 363
            TEKDITPMGGFPHYG VKDDYLLIKGCCVGPKKRVVTLRQSLL QTSR+ALEEIK+KFID
Sbjct: 305  TEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLNQTSRVALEEIKLKFID 364

Query: 362  TSSKFGHGRFQTSEEKQKFYGRLK 291
            TSSKFGHGRFQT++EKQKFYGRLK
Sbjct: 365  TSSKFGHGRFQTTQEKQKFYGRLK 388


>gb|ABB87120.1| ribosomal protein L3-like [Solanum tuberosum]
          Length = 389

 Score =  750 bits (1937), Expect = 0.0
 Identities = 360/384 (93%), Positives = 376/384 (97%)
 Frame = -1

Query: 1442 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIVREVEKPG 1263
            KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP+KPCKLTAFLGYKAGMTHIVREVEKPG
Sbjct: 5    KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREVEKPG 64

Query: 1262 SKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEDIKRRFYKNWCK 1083
            SKLHKKETCEAVTIVETPPMVIVGVV YVKTPRGLR LNTVWAQHLSEDIKRRFYKNWCK
Sbjct: 65   SKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEDIKRRFYKNWCK 124

Query: 1082 SKKKAFTKYSRKYESDEGKKDIQSQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHLMEI 903
            SKKKAF KYS+KYE+DEGKKDIQ+QLEK+KKYA VIRVLAHTQIRKMKGLKQKKAHLMEI
Sbjct: 125  SKKKAFLKYSKKYETDEGKKDIQAQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAHLMEI 184

Query: 902  QVNGGSIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 723
            QVNGGSIAQKVDFAYGFFEKQVP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK
Sbjct: 185  QVNGGSIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244

Query: 722  THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKLGKTGQENHTAITEFDR 543
            THRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YKLGK GQE+HTA+TEFDR
Sbjct: 245  THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKVGQESHTAVTEFDR 304

Query: 542  TEKDITPMGGFPHYGEVKDDYLLIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKIKFID 363
            TEK+ITP+GGF HYG VKDDYLLIKGCCVGPKKRVVTLRQSLL QTSR+ALEEIK+KFID
Sbjct: 305  TEKEITPIGGFAHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLNQTSRVALEEIKLKFID 364

Query: 362  TSSKFGHGRFQTSEEKQKFYGRLK 291
            TSSKFGHGRFQT++EKQKFYGRLK
Sbjct: 365  TSSKFGHGRFQTTQEKQKFYGRLK 388


>ref|NP_001233997.1| ribosomal protein L3 [Solanum lycopersicum]
            gi|38327504|gb|AAR17783.1| ribosomal protein L3 [Solanum
            lycopersicum]
          Length = 389

 Score =  750 bits (1936), Expect = 0.0
 Identities = 360/384 (93%), Positives = 376/384 (97%)
 Frame = -1

Query: 1442 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIVREVEKPG 1263
            KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP+KPCKLTAFLGYKAGMTHIVREVEKPG
Sbjct: 5    KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREVEKPG 64

Query: 1262 SKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEDIKRRFYKNWCK 1083
            SKLHKKETCEAVTIVETPPMVIVGVV YVKTPRGLR LNTVWAQHLSEDIKRRFYKNWCK
Sbjct: 65   SKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEDIKRRFYKNWCK 124

Query: 1082 SKKKAFTKYSRKYESDEGKKDIQSQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHLMEI 903
            SKKKAF KYS+KYE+DEGKKDIQ+QLEK+KKYA VIRVLAHTQIRKMKGLKQKKAHLMEI
Sbjct: 125  SKKKAFLKYSKKYETDEGKKDIQAQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAHLMEI 184

Query: 902  QVNGGSIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 723
            QVNGGSIAQKVDFAYGFFEKQVP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK
Sbjct: 185  QVNGGSIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244

Query: 722  THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKLGKTGQENHTAITEFDR 543
            THRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YKLGK GQE+HTA+TEFDR
Sbjct: 245  THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKVGQESHTALTEFDR 304

Query: 542  TEKDITPMGGFPHYGEVKDDYLLIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKIKFID 363
            TEKDITP+GGFPHYG VK+DYLLIKGCCVG KKRVVTLRQSLL QTSR+ALEEIK+KFID
Sbjct: 305  TEKDITPIGGFPHYGVVKEDYLLIKGCCVGTKKRVVTLRQSLLNQTSRVALEEIKLKFID 364

Query: 362  TSSKFGHGRFQTSEEKQKFYGRLK 291
            TSSKFGHGRFQT++EKQKFYGRLK
Sbjct: 365  TSSKFGHGRFQTTQEKQKFYGRLK 388


>emb|CBI18223.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  746 bits (1927), Expect = 0.0
 Identities = 355/384 (92%), Positives = 379/384 (98%)
 Frame = -1

Query: 1442 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIVREVEKPG 1263
            KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP+KPC+LTAFLGYKAGMTHIVREVEKPG
Sbjct: 65   KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVREVEKPG 124

Query: 1262 SKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEDIKRRFYKNWCK 1083
            SKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSE++KRRFYKNWCK
Sbjct: 125  SKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFYKNWCK 184

Query: 1082 SKKKAFTKYSRKYESDEGKKDIQSQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHLMEI 903
            SKKKAFTKYS++YE++EGKK IQ+QLEKMKKYA+VIRVLAHTQIRKMKGLKQKKAHLMEI
Sbjct: 185  SKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKAHLMEI 244

Query: 902  QVNGGSIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 723
            QVNGG+IAQKVD+AYGFFEKQVP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK
Sbjct: 245  QVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 304

Query: 722  THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKLGKTGQENHTAITEFDR 543
            THRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKIYKLGK  QE+HTA+TEFDR
Sbjct: 305  THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHTALTEFDR 364

Query: 542  TEKDITPMGGFPHYGEVKDDYLLIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKIKFID 363
            TEKDITPMGGFPHYG VKDDY++IKGCCVGPKKRVVTLRQSLL QTSR+ALEEIK+KFID
Sbjct: 365  TEKDITPMGGFPHYGVVKDDYVMIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKLKFID 424

Query: 362  TSSKFGHGRFQTSEEKQKFYGRLK 291
            TSSKFGHGRFQT++EKQKFYGR+K
Sbjct: 425  TSSKFGHGRFQTTQEKQKFYGRMK 448


>ref|XP_002265125.1| PREDICTED: 60S ribosomal protein L3-like [Vitis vinifera]
          Length = 397

 Score =  746 bits (1927), Expect = 0.0
 Identities = 355/384 (92%), Positives = 379/384 (98%)
 Frame = -1

Query: 1442 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIVREVEKPG 1263
            KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP+KPC+LTAFLGYKAGMTHIVREVEKPG
Sbjct: 13   KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVREVEKPG 72

Query: 1262 SKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEDIKRRFYKNWCK 1083
            SKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSE++KRRFYKNWCK
Sbjct: 73   SKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFYKNWCK 132

Query: 1082 SKKKAFTKYSRKYESDEGKKDIQSQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHLMEI 903
            SKKKAFTKYS++YE++EGKK IQ+QLEKMKKYA+VIRVLAHTQIRKMKGLKQKKAHLMEI
Sbjct: 133  SKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKAHLMEI 192

Query: 902  QVNGGSIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 723
            QVNGG+IAQKVD+AYGFFEKQVP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK
Sbjct: 193  QVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 252

Query: 722  THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKLGKTGQENHTAITEFDR 543
            THRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKIYKLGK  QE+HTA+TEFDR
Sbjct: 253  THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHTALTEFDR 312

Query: 542  TEKDITPMGGFPHYGEVKDDYLLIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKIKFID 363
            TEKDITPMGGFPHYG VKDDY++IKGCCVGPKKRVVTLRQSLL QTSR+ALEEIK+KFID
Sbjct: 313  TEKDITPMGGFPHYGVVKDDYVMIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKLKFID 372

Query: 362  TSSKFGHGRFQTSEEKQKFYGRLK 291
            TSSKFGHGRFQT++EKQKFYGR+K
Sbjct: 373  TSSKFGHGRFQTTQEKQKFYGRMK 396