BLASTX nr result

ID: Cnidium21_contig00002387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002387
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302129.1| predicted protein [Populus trichocarpa] gi|2...   229   7e-58
gb|ABK93056.1| unknown [Populus trichocarpa]                          229   7e-58
emb|CBI38929.3| unnamed protein product [Vitis vinifera]              224   1e-56
emb|CBI36518.3| unnamed protein product [Vitis vinifera]              224   1e-56
ref|XP_002272092.1| PREDICTED: 40S ribosomal protein S12-like is...   224   1e-56

>ref|XP_002302129.1| predicted protein [Populus trichocarpa] gi|222843855|gb|EEE81402.1|
           predicted protein [Populus trichocarpa]
          Length = 145

 Score =  229 bits (583), Expect = 7e-58
 Identities = 108/124 (87%), Positives = 119/124 (95%)
 Frame = +1

Query: 178 LGEPMDIMTALQLVLKKSLAHNGLARGLHEGAKVIEKHAAQLCVIAEDCNQPDYVKLVKA 357
           LGEPMD+MTALQLVL+KSLAH GL+RGLHEGAKVIEKHAAQLCV+AEDCNQPDYVKLVKA
Sbjct: 22  LGEPMDLMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKA 81

Query: 358 LCADNNVSLITVPSAKTLGEWAGLCKIDSEGNARKVVGCSCVVVKDYGEESEGLNTVQAH 537
           LCAD+NV+L+TVPSAKTLGEWAGLCKIDSEG ARKVVGCSCVVVKD+GE++E LN +Q H
Sbjct: 82  LCADHNVNLLTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEDTEALNVIQQH 141

Query: 538 VKAN 549
           VKAN
Sbjct: 142 VKAN 145


>gb|ABK93056.1| unknown [Populus trichocarpa]
          Length = 144

 Score =  229 bits (583), Expect = 7e-58
 Identities = 108/124 (87%), Positives = 119/124 (95%)
 Frame = +1

Query: 178 LGEPMDIMTALQLVLKKSLAHNGLARGLHEGAKVIEKHAAQLCVIAEDCNQPDYVKLVKA 357
           LGEPMD+MTALQLVL+KSLAH GL+RGLHEGAKVIEKHAAQLCV+AEDCNQPDYVKLVKA
Sbjct: 21  LGEPMDLMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKA 80

Query: 358 LCADNNVSLITVPSAKTLGEWAGLCKIDSEGNARKVVGCSCVVVKDYGEESEGLNTVQAH 537
           LCAD+NV+L+TVPSAKTLGEWAGLCKIDSEG ARKVVGCSCVVVKD+GE++E LN +Q H
Sbjct: 81  LCADHNVNLLTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEDTEALNVIQQH 140

Query: 538 VKAN 549
           VKAN
Sbjct: 141 VKAN 144


>emb|CBI38929.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score =  224 bits (572), Expect = 1e-56
 Identities = 108/124 (87%), Positives = 117/124 (94%)
 Frame = +1

Query: 178 LGEPMDIMTALQLVLKKSLAHNGLARGLHEGAKVIEKHAAQLCVIAEDCNQPDYVKLVKA 357
           LGEPMD+MTALQLVL+KSLAH GLARGLHEGAKVIEKHAA LCV+AEDCNQPDYVKLVKA
Sbjct: 105 LGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHLCVLAEDCNQPDYVKLVKA 164

Query: 358 LCADNNVSLITVPSAKTLGEWAGLCKIDSEGNARKVVGCSCVVVKDYGEESEGLNTVQAH 537
           LCAD+NVSLITVPSAKTLGEWAGLCKIDSEG ARKVVGCSCVVVKD+GEE+E +N VQ  
Sbjct: 165 LCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEETEAMNVVQQQ 224

Query: 538 VKAN 549
           VK++
Sbjct: 225 VKSH 228


>emb|CBI36518.3| unnamed protein product [Vitis vinifera]
          Length = 177

 Score =  224 bits (572), Expect = 1e-56
 Identities = 114/153 (74%), Positives = 128/153 (83%), Gaps = 2/153 (1%)
 Frame = +1

Query: 97  LLICKSS--NMSGEDXXXXXXXXXXXXXXLGEPMDIMTALQLVLKKSLAHNGLARGLHEG 270
           LLIC+ +   MSG++              LGE +D+MTALQLVL+KSLAH GL RGLHEG
Sbjct: 28  LLICELTLRKMSGDEAVVVEAAAAPP---LGETLDLMTALQLVLRKSLAHGGLVRGLHEG 84

Query: 271 AKVIEKHAAQLCVIAEDCNQPDYVKLVKALCADNNVSLITVPSAKTLGEWAGLCKIDSEG 450
           AKVIEKHAAQLCV+AEDCNQPDY+KLVKALCAD+NVSLI+VPSAKTLGEWAGLCKIDSEG
Sbjct: 85  AKVIEKHAAQLCVLAEDCNQPDYIKLVKALCADHNVSLISVPSAKTLGEWAGLCKIDSEG 144

Query: 451 NARKVVGCSCVVVKDYGEESEGLNTVQAHVKAN 549
            ARKVVGCSCVVVKDYGEE+ GL+ VQ HVK+N
Sbjct: 145 KARKVVGCSCVVVKDYGEETPGLHIVQEHVKSN 177


>ref|XP_002272092.1| PREDICTED: 40S ribosomal protein S12-like isoform 2 [Vitis
           vinifera] gi|225465504|ref|XP_002272051.1| PREDICTED:
           40S ribosomal protein S12-like isoform 1 [Vitis
           vinifera]
          Length = 142

 Score =  224 bits (572), Expect = 1e-56
 Identities = 108/124 (87%), Positives = 117/124 (94%)
 Frame = +1

Query: 178 LGEPMDIMTALQLVLKKSLAHNGLARGLHEGAKVIEKHAAQLCVIAEDCNQPDYVKLVKA 357
           LGEPMD+MTALQLVL+KSLAH GLARGLHEGAKVIEKHAA LCV+AEDCNQPDYVKLVKA
Sbjct: 19  LGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHLCVLAEDCNQPDYVKLVKA 78

Query: 358 LCADNNVSLITVPSAKTLGEWAGLCKIDSEGNARKVVGCSCVVVKDYGEESEGLNTVQAH 537
           LCAD+NVSLITVPSAKTLGEWAGLCKIDSEG ARKVVGCSCVVVKD+GEE+E +N VQ  
Sbjct: 79  LCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEETEAMNVVQQQ 138

Query: 538 VKAN 549
           VK++
Sbjct: 139 VKSH 142


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