BLASTX nr result

ID: Cnidium21_contig00002386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002386
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302129.1| predicted protein [Populus trichocarpa] gi|2...   233   3e-59
gb|ABK93056.1| unknown [Populus trichocarpa]                          233   3e-59
emb|CBI38929.3| unnamed protein product [Vitis vinifera]              232   6e-59
ref|XP_002272092.1| PREDICTED: 40S ribosomal protein S12-like is...   231   1e-58
emb|CBI36518.3| unnamed protein product [Vitis vinifera]              231   2e-58

>ref|XP_002302129.1| predicted protein [Populus trichocarpa] gi|222843855|gb|EEE81402.1|
           predicted protein [Populus trichocarpa]
          Length = 145

 Score =  233 bits (595), Expect = 3e-59
 Identities = 114/147 (77%), Positives = 128/147 (87%)
 Frame = +1

Query: 112 MSGEDAVVVETXXXXXXXXXXXXLGEPMDIMTALQLVLKKSLAHGGLARGLHEGAKVIEK 291
           MSGE+  V +T            LGEPMD+MTALQLVL+KSLAHGGL+RGLHEGAKVIEK
Sbjct: 1   MSGEEGAVAQTETPAVADVPP--LGEPMDLMTALQLVLRKSLAHGGLSRGLHEGAKVIEK 58

Query: 292 HAAQLCVVAEDCNQPDYVKLVKALCADNNVSLITVPAAKTLGEWAGLCKIDSEGNARKVV 471
           HAAQLCV+AEDCNQPDYVKLVKALCAD+NV+L+TVP+AKTLGEWAGLCKIDSEG ARKVV
Sbjct: 59  HAAQLCVLAEDCNQPDYVKLVKALCADHNVNLLTVPSAKTLGEWAGLCKIDSEGKARKVV 118

Query: 472 GCSCVVVKDFGEESEGLNTVQAHVKSN 552
           GCSCVVVKDFGE++E LN +Q HVK+N
Sbjct: 119 GCSCVVVKDFGEDTEALNVIQQHVKAN 145


>gb|ABK93056.1| unknown [Populus trichocarpa]
          Length = 144

 Score =  233 bits (595), Expect = 3e-59
 Identities = 114/147 (77%), Positives = 128/147 (87%)
 Frame = +1

Query: 112 MSGEDAVVVETXXXXXXXXXXXXLGEPMDIMTALQLVLKKSLAHGGLARGLHEGAKVIEK 291
           MSGE+  V +T            LGEPMD+MTALQLVL+KSLAHGGL+RGLHEGAKVIEK
Sbjct: 1   MSGEEGAVAQTETPAVADVP---LGEPMDLMTALQLVLRKSLAHGGLSRGLHEGAKVIEK 57

Query: 292 HAAQLCVVAEDCNQPDYVKLVKALCADNNVSLITVPAAKTLGEWAGLCKIDSEGNARKVV 471
           HAAQLCV+AEDCNQPDYVKLVKALCAD+NV+L+TVP+AKTLGEWAGLCKIDSEG ARKVV
Sbjct: 58  HAAQLCVLAEDCNQPDYVKLVKALCADHNVNLLTVPSAKTLGEWAGLCKIDSEGKARKVV 117

Query: 472 GCSCVVVKDFGEESEGLNTVQAHVKSN 552
           GCSCVVVKDFGE++E LN +Q HVK+N
Sbjct: 118 GCSCVVVKDFGEDTEALNVIQQHVKAN 144


>emb|CBI38929.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score =  232 bits (592), Expect = 6e-59
 Identities = 120/152 (78%), Positives = 129/152 (84%), Gaps = 1/152 (0%)
 Frame = +1

Query: 100 IQPNMSGEDAVV-VETXXXXXXXXXXXXLGEPMDIMTALQLVLKKSLAHGGLARGLHEGA 276
           I   MSGE+ VV VET            LGEPMD+MTALQLVL+KSLAHGGLARGLHEGA
Sbjct: 83  IHKKMSGEEVVVAVETSAPAPA------LGEPMDLMTALQLVLRKSLAHGGLARGLHEGA 136

Query: 277 KVIEKHAAQLCVVAEDCNQPDYVKLVKALCADNNVSLITVPAAKTLGEWAGLCKIDSEGN 456
           KVIEKHAA LCV+AEDCNQPDYVKLVKALCAD+NVSLITVP+AKTLGEWAGLCKIDSEG 
Sbjct: 137 KVIEKHAAHLCVLAEDCNQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGK 196

Query: 457 ARKVVGCSCVVVKDFGEESEGLNTVQAHVKSN 552
           ARKVVGCSCVVVKDFGEE+E +N VQ  VKS+
Sbjct: 197 ARKVVGCSCVVVKDFGEETEAMNVVQQQVKSH 228


>ref|XP_002272092.1| PREDICTED: 40S ribosomal protein S12-like isoform 2 [Vitis
           vinifera] gi|225465504|ref|XP_002272051.1| PREDICTED:
           40S ribosomal protein S12-like isoform 1 [Vitis
           vinifera]
          Length = 142

 Score =  231 bits (589), Expect = 1e-58
 Identities = 119/148 (80%), Positives = 128/148 (86%), Gaps = 1/148 (0%)
 Frame = +1

Query: 112 MSGEDAVV-VETXXXXXXXXXXXXLGEPMDIMTALQLVLKKSLAHGGLARGLHEGAKVIE 288
           MSGE+ VV VET            LGEPMD+MTALQLVL+KSLAHGGLARGLHEGAKVIE
Sbjct: 1   MSGEEVVVAVETSAPAPA------LGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIE 54

Query: 289 KHAAQLCVVAEDCNQPDYVKLVKALCADNNVSLITVPAAKTLGEWAGLCKIDSEGNARKV 468
           KHAA LCV+AEDCNQPDYVKLVKALCAD+NVSLITVP+AKTLGEWAGLCKIDSEG ARKV
Sbjct: 55  KHAAHLCVLAEDCNQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKV 114

Query: 469 VGCSCVVVKDFGEESEGLNTVQAHVKSN 552
           VGCSCVVVKDFGEE+E +N VQ  VKS+
Sbjct: 115 VGCSCVVVKDFGEETEAMNVVQQQVKSH 142


>emb|CBI36518.3| unnamed protein product [Vitis vinifera]
          Length = 177

 Score =  231 bits (588), Expect = 2e-58
 Identities = 115/147 (78%), Positives = 128/147 (87%)
 Frame = +1

Query: 112 MSGEDAVVVETXXXXXXXXXXXXLGEPMDIMTALQLVLKKSLAHGGLARGLHEGAKVIEK 291
           MSG++AVVVE             LGE +D+MTALQLVL+KSLAHGGL RGLHEGAKVIEK
Sbjct: 38  MSGDEAVVVEAAAAPP-------LGETLDLMTALQLVLRKSLAHGGLVRGLHEGAKVIEK 90

Query: 292 HAAQLCVVAEDCNQPDYVKLVKALCADNNVSLITVPAAKTLGEWAGLCKIDSEGNARKVV 471
           HAAQLCV+AEDCNQPDY+KLVKALCAD+NVSLI+VP+AKTLGEWAGLCKIDSEG ARKVV
Sbjct: 91  HAAQLCVLAEDCNQPDYIKLVKALCADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVV 150

Query: 472 GCSCVVVKDFGEESEGLNTVQAHVKSN 552
           GCSCVVVKD+GEE+ GL+ VQ HVKSN
Sbjct: 151 GCSCVVVKDYGEETPGLHIVQEHVKSN 177


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