BLASTX nr result

ID: Cnidium21_contig00002376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002376
         (1315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 7...   344   3e-92
ref|XP_002311694.1| predicted protein [Populus trichocarpa] gi|2...   335   1e-89
ref|XP_004134043.1| PREDICTED: U-box domain-containing protein 7...   330   4e-88
ref|XP_002314503.1| predicted protein [Populus trichocarpa] gi|2...   330   6e-88
ref|XP_002528359.1| Pre-mRNA-splicing factor, putative [Ricinus ...   326   7e-87

>ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 72 [Vitis vinifera]
            gi|296083725|emb|CBI23714.3| unnamed protein product
            [Vitis vinifera]
          Length = 524

 Score =  344 bits (882), Expect = 3e-92
 Identities = 191/382 (50%), Positives = 246/382 (64%), Gaps = 9/382 (2%)
 Frame = +3

Query: 102  VPNSKSAAPVLNGSSLSNGKTSKAADE-----QSACPKFPDCITKQITCTRRNLSQHRRR 266
            +P S S A  +N S+LSNGK +   +E     +   P     I  ++T     LSQ R++
Sbjct: 136  IPMSMSTATAVNASALSNGKRAAEDEELGPNGKKLRPGISASIITELTDCNAALSQQRKK 195

Query: 267  YRKISPSLATVDALRGYIFNKAYTLHQTIVPGVLSLDIDNSEEIIATGGADTNAIVFDLL 446
             R+I  SLA +DA+  Y    +Y LH+T  PG+LS DI  S++IIATGG D NA++FD  
Sbjct: 196  -RQIPTSLAPIDAVERYTQLSSYPLHKTNKPGILSADIYYSKDIIATGGVDANAVLFDRQ 254

Query: 447  SRKTVSTLIGHSEKVTSVKFVNKGELVVTGSSDKTVRVWRRSEKGSYECKDILHHHTAEV 626
            S + +STL GHS+KVTSVKFV + +L +T S+DKTVRVW+ S+  +Y C+ IL  HTAEV
Sbjct: 255  SGQILSTLSGHSKKVTSVKFVTQDDLFLTASADKTVRVWQGSDNENYNCRHILKDHTAEV 314

Query: 627  RAVTIHPSQKYLVTASLDCSWNFYDLSSESCVARVARGTGSESFSSAVFHPDGHIFGTCA 806
            +AVT+H +  Y VTASLD +W FYDLSS  C+ +VA  +GSE ++SA FHPDG I GT  
Sbjct: 315  QAVTVHATNNYFVTASLDNTWCFYDLSSGLCLTQVADASGSEGYTSAAFHPDGLILGTGT 374

Query: 807  S-GLVRFWDVAKQDDILEIDAHTGPVTSIAFSENGYTLATAAAADGVKLWDLRFLRTMKT 983
            S  LV+ WDV  Q ++   D H G VT+I+FSENGY LAT AA DGVKLWDLR LR  +T
Sbjct: 375  SEALVKIWDVKSQANVARFDGHVGAVTAISFSENGYFLAT-AAHDGVKLWDLRKLRNFRT 433

Query: 984  FPSDDICTQTRSVDFDHSGKYLATGGEHISIYEIDAGRDP---ITTFSDMPAIGDVSCVK 1154
            F   D  T T SV+FDHSG YLA  G  I +Y++   +     I TF D+   G  +CVK
Sbjct: 434  FTPYDSNTATNSVEFDHSGNYLAIAGSDIRVYQVANVKSEWNCIKTFPDLSGTGKATCVK 493

Query: 1155 FGKDAKYVVAAGRSDSKLLLFG 1220
            FG DAKY +A G  D  L +FG
Sbjct: 494  FGPDAKY-LAVGSMDRNLRIFG 514


>ref|XP_002311694.1| predicted protein [Populus trichocarpa] gi|222851514|gb|EEE89061.1|
            predicted protein [Populus trichocarpa]
          Length = 524

 Score =  335 bits (860), Expect = 1e-89
 Identities = 185/382 (48%), Positives = 245/382 (64%), Gaps = 9/382 (2%)
 Frame = +3

Query: 102  VPNSKSAAPVLNGSSLSNGKTSKAADE-----QSACPKFPDCITKQITCTRRNLSQHRRR 266
            +P S S A   N S LSNGK +   D+     +   P     I  ++T     LSQ R++
Sbjct: 136  IPMSASEAVTENASVLSNGKRAAEDDDLGQPGKRVRPGISASIITELTDCNATLSQQRKK 195

Query: 267  YRKISPSLATVDALRGYIFNKAYTLHQTIVPGVLSLDIDNSEEIIATGGADTNAIVFDLL 446
             R+I P+LA + AL  Y    ++ LH+T  PG+LS+DI  S++IIATGG D  A+VFD L
Sbjct: 196  -RQIPPTLAPIGALERYTQLSSHPLHKTSKPGILSIDIQYSKDIIATGGVDATAVVFDRL 254

Query: 447  SRKTVSTLIGHSEKVTSVKFVNKGELVVTGSSDKTVRVWRRSEKGSYECKDILHHHTAEV 626
            S + VSTL GHS+KVTSVKFV +GE  +TGS+DKT+RVW+ SE G+Y+C+ IL  HTAEV
Sbjct: 255  SGQIVSTLSGHSKKVTSVKFVAEGEFFLTGSADKTIRVWQGSEDGNYDCRHILKDHTAEV 314

Query: 627  RAVTIHPSQKYLVTASLDCSWNFYDLSSESCVARVARGTGSESFSSAVFHPDGHIFGTCA 806
            +AVT+H +  Y VTASLD +W FYDLSS  C+ +VA  + ++ ++SA FHPDG I GT  
Sbjct: 315  QAVTVHATNNYFVTASLDNTWCFYDLSSGLCMTQVADTSKTDGYTSAAFHPDGLILGTGT 374

Query: 807  S-GLVRFWDVAKQDDILEIDAHTGPVTSIAFSENGYTLATAAAADGVKLWDLRFLRTMKT 983
            S  +V+ WDV  Q ++ + + H GPVT+I+FSENGY LAT AA D VKLWDLR L+  +T
Sbjct: 375  SEAVVKIWDVKSQANVAKFEGHVGPVTAISFSENGYFLAT-AAHDSVKLWDLRKLKNFRT 433

Query: 984  FPSDDICTQTRSVDFDHSGKYLATGGEHISIYE---IDAGRDPITTFSDMPAIGDVSCVK 1154
                D  T T SV+FDHSG YL   G  I +Y+   + A  + I T  D+   G  +C+K
Sbjct: 434  LNLYDSDTPTNSVEFDHSGSYLGIAGSDIRVYQVGSVKADWNCIKTLPDLSGTGRATCLK 493

Query: 1155 FGKDAKYVVAAGRSDSKLLLFG 1220
            FG DA Y +A G  D  L +FG
Sbjct: 494  FGPDANY-IAVGSMDRNLRVFG 514


>ref|XP_004134043.1| PREDICTED: U-box domain-containing protein 72-like [Cucumis sativus]
          Length = 522

 Score =  330 bits (847), Expect = 4e-88
 Identities = 178/375 (47%), Positives = 244/375 (65%), Gaps = 4/375 (1%)
 Frame = +3

Query: 108  NSKSAAPVLNGSSLSNGKTSKAADEQSACPKFPDCITKQITCTRRNLSQHRRRYRKISPS 287
            +S +AA  +NG  + N       D +   P   D +  ++T     LSQ R+R R+I  +
Sbjct: 142  SSNAAAVNVNGKRV-NEDEELGPDGKKIRPGISDAVISELTECNAALSQQRKR-RQIPAT 199

Query: 288  LATVDALRGYIFNKAYTLHQTIVPGVLSLDIDNSEEIIATGGADTNAIVFDLLSRKTVST 467
            L  V+AL  Y    ++ LH+T  PG++SLDI + +++IATGG DTNA++F   S + +ST
Sbjct: 200  LVPVEALENYTQISSHPLHKTSKPGIMSLDIHHEKDVIATGGLDTNAVLFGRSSGEILST 259

Query: 468  LIGHSEKVTSVKFVNKGELVVTGSSDKTVRVWRRSEKGSYECKDILHHHTAEVRAVTIHP 647
            L GHS+KVTSVKFV + +L +TGS+DKTVRVW++S+ G+Y C+ IL  HTAEV+AVT+H 
Sbjct: 260  LSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHA 319

Query: 648  SQKYLVTASLDCSWNFYDLSSESCVARVARGTGSESFSSAVFHPDGHIFGTCAS-GLVRF 824
            +  + VTASLD +W FY+L+S  C+ +VA  + +E ++SA FHPDG I GT  S  LV+ 
Sbjct: 320  TNDFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAAFHPDGLILGTGTSEALVKI 379

Query: 825  WDVAKQDDILEIDAHTGPVTSIAFSENGYTLATAAAADGVKLWDLRFLRTMKTFPSDDIC 1004
            WDV  Q ++ + D H G VT+I+FSENGY LAT AA DGVKLWDLR L+  +TF   D  
Sbjct: 380  WDVKSQKNVAKFDGHVGAVTAISFSENGYFLAT-AAHDGVKLWDLRKLKNFRTFAPYDSD 438

Query: 1005 TQTRSVDFDHSGKYLATGGEHISIYEIDAGRDP---ITTFSDMPAIGDVSCVKFGKDAKY 1175
            T T SVDFDHSG YLA  G  I +Y++ + +     I T  D+   G  +C+KFG DAKY
Sbjct: 439  TPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTLPDLSGTGKATCLKFGPDAKY 498

Query: 1176 VVAAGRSDSKLLLFG 1220
             +A G  D  L +FG
Sbjct: 499  -LAVGSMDRNLRIFG 512


>ref|XP_002314503.1| predicted protein [Populus trichocarpa] gi|222863543|gb|EEF00674.1|
            predicted protein [Populus trichocarpa]
          Length = 524

 Score =  330 bits (845), Expect = 6e-88
 Identities = 182/382 (47%), Positives = 242/382 (63%), Gaps = 9/382 (2%)
 Frame = +3

Query: 102  VPNSKSAAPVLNGSSLSNGKTSKAADE-----QSACPKFPDCITKQITCTRRNLSQHRRR 266
            VP   S A   N S LSNGK +   D+     +   P     I  ++T     LSQ R++
Sbjct: 136  VPMFTSEAVTANASVLSNGKRAAKDDDLGQPGKRIRPGISASIITELTECNAALSQQRKK 195

Query: 267  YRKISPSLATVDALRGYIFNKAYTLHQTIVPGVLSLDIDNSEEIIATGGADTNAIVFDLL 446
             R++ P+LA +DAL  Y    ++ LH+T  PG+LS+DI  S++IIATGGAD  A++FD  
Sbjct: 196  -RQVPPTLAPIDALERYTQLSSHPLHRTSKPGILSIDIQYSKDIIATGGADATAVIFDRP 254

Query: 447  SRKTVSTLIGHSEKVTSVKFVNKGELVVTGSSDKTVRVWRRSEKGSYECKDILHHHTAEV 626
            S +  S L GHS+KVTSVKFV +GE  +TGS+DKTVRVW+ SE G+Y+C+ IL  HTAEV
Sbjct: 255  SGQIASALSGHSKKVTSVKFVGEGEFFLTGSADKTVRVWQGSEDGNYDCRHILKDHTAEV 314

Query: 627  RAVTIHPSQKYLVTASLDCSWNFYDLSSESCVARVARGTGSESFSSAVFHPDGHIFGTCA 806
            +AVT+H +  Y VTASLD +W FYDLSS  C+ +VA  + ++ ++SA FHPDG I GT  
Sbjct: 315  QAVTVHATNNYFVTASLDNTWCFYDLSSGLCLTQVADTSKTDGYTSAAFHPDGLILGTGT 374

Query: 807  S-GLVRFWDVAKQDDILEIDAHTGPVTSIAFSENGYTLATAAAADGVKLWDLRFLRTMKT 983
            S  +V+ WDV  Q ++ + + H GPVT+I FSENGY LAT AA D VKLWDLR L+  +T
Sbjct: 375  SEAVVKIWDVKSQANVAKFEGHVGPVTAITFSENGYFLAT-AAHDSVKLWDLRKLKNFRT 433

Query: 984  FPSDDICTQTRSVDFDHSGKYLATGGEHISIYE---IDAGRDPITTFSDMPAIGDVSCVK 1154
                D  T T SV+FDHSG YL   G  I +Y+   + A  + I T  D+   G  +CVK
Sbjct: 434  LNLYDSDTPTNSVEFDHSGSYLGISGSDIRVYQVGSVKADWNCIKTLPDLSGTGRATCVK 493

Query: 1155 FGKDAKYVVAAGRSDSKLLLFG 1220
            FG ++ Y +A G  D  L +FG
Sbjct: 494  FGPESNY-IAVGSMDHNLRIFG 514


>ref|XP_002528359.1| Pre-mRNA-splicing factor, putative [Ricinus communis]
            gi|223532227|gb|EEF34031.1| Pre-mRNA-splicing factor,
            putative [Ricinus communis]
          Length = 531

 Score =  326 bits (836), Expect = 7e-87
 Identities = 183/389 (47%), Positives = 249/389 (64%), Gaps = 16/389 (4%)
 Frame = +3

Query: 102  VPNSKSAAPVLNGSSLSNGKTSKAADE-----QSACPKFPDCITKQITCTRRNLSQHRRR 266
            +P S +AA   N  + SNGK + A D+     +   P     I  ++T     LSQ R+R
Sbjct: 136  IPLSVTAAATENAYAASNGKRAAADDDLGPPGKKLRPGISATIITELTDCNAALSQQRKR 195

Query: 267  YRKISPSLATVDALRGYIFNKAYTLHQTIVPGVLSLDIDNSEEIIATGGADTNAIVFDLL 446
             R+I  +LA VDA+  Y    ++ LH+T  PG++S+DI  S++IIATGG D+ A++FD  
Sbjct: 196  -RQIPSTLAPVDAVERYTQLSSHPLHKTNKPGIVSMDIQYSKDIIATGGVDSTAVLFDRP 254

Query: 447  SRKTVSTLIGHSEKVTSVKFVNKGELVVTGSSDKTVRVWRRSEKGSYECKDILHHHTAEV 626
            S + +STL GHS+KVTSV+FV +G+L +TGS+DKTVRVW+ SE G+Y+C+ IL  HTAEV
Sbjct: 255  SGQILSTLSGHSKKVTSVRFVAEGDLFLTGSADKTVRVWQGSEDGNYDCRHILKDHTAEV 314

Query: 627  RAVTIHPSQKYLVTASLDCSWNFYDLSSESCVARVARGTGS-------ESFSSAVFHPDG 785
            +AVT+H +  Y VTASLD +W FYD+SS  C+A+VA  + S       E ++SA FHPDG
Sbjct: 315  QAVTVHATNNYFVTASLDSTWCFYDISSGLCLAQVADSSKSDTDSSSPEGYTSAAFHPDG 374

Query: 786  HIFGTCAS-GLVRFWDVAKQDDILEIDAHTGPVTSIAFSENGYTLATAAAADGVKLWDLR 962
             I GT  S  +V+ WDV  Q ++ + + H GPVT+I+FSENGY LAT AA D VKLWDLR
Sbjct: 375  LILGTGTSDAVVKIWDVKSQANVAKFEGHVGPVTAISFSENGYFLAT-AAYDSVKLWDLR 433

Query: 963  FLRTMKTFPSDDICTQTRSVDFDHSGKYLATGGEHISIYE---IDAGRDPITTFSDMPAI 1133
             L+  +T    D  T T SV+FDHSG YL   G  I +++   + A  + + T  D+   
Sbjct: 434  KLKNFRTLNLYDSDTPTNSVEFDHSGCYLGVAGSDIRVFQVASVKADWNCVKTLPDLSGT 493

Query: 1134 GDVSCVKFGKDAKYVVAAGRSDSKLLLFG 1220
            G  +CVKFG DAKY +A G  D  L +FG
Sbjct: 494  GKATCVKFGPDAKY-IAVGSMDRNLRIFG 521


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