BLASTX nr result

ID: Cnidium21_contig00002366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002366
         (802 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521377.1| conserved hypothetical protein [Ricinus comm...   132   1e-28
ref|XP_002277637.1| PREDICTED: uncharacterized protein LOC100267...   129   1e-27
ref|XP_002329032.1| predicted protein [Populus trichocarpa] gi|1...   123   5e-26
ref|XP_004141806.1| PREDICTED: uncharacterized protein LOC101209...   121   2e-25
ref|NP_001236849.1| uncharacterized protein LOC100306567 [Glycin...   117   4e-24

>ref|XP_002521377.1| conserved hypothetical protein [Ricinus communis]
           gi|223539455|gb|EEF41045.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 119

 Score =  132 bits (331), Expect = 1e-28
 Identities = 70/119 (58%), Positives = 85/119 (71%), Gaps = 6/119 (5%)
 Frame = +3

Query: 234 KSCKD--VKDSYSYGDRDIVGAPSGMNNMRSYSTNFASSVNPAPPSYMMGNGKELQIKKV 407
           KSC+D  ++ +  YGD+    AP+ M ++RSYS  +A S    P  +    GKEL+IKK 
Sbjct: 8   KSCRDGRMRIADYYGDKT---APTSMQDLRSYSVGYAGSTTVQPSQF----GKELKIKKG 60

Query: 408 KNNQGSIGKSWSFNDPELQRKKRVAGYKVYTVEGKMKGSLRKSFRWIKD----IVYGWR 572
           K+N GS  K+WSFNDPELQRKKRVA YKVY +EGKMKGSLRKSFRWIKD    +VYGWR
Sbjct: 61  KSNLGSSSKNWSFNDPELQRKKRVASYKVYAMEGKMKGSLRKSFRWIKDTYTQVVYGWR 119


>ref|XP_002277637.1| PREDICTED: uncharacterized protein LOC100267009 [Vitis vinifera]
          Length = 117

 Score =  129 bits (323), Expect = 1e-27
 Identities = 73/119 (61%), Positives = 88/119 (73%), Gaps = 7/119 (5%)
 Frame = +3

Query: 234 KSCKDVK---DSYSYGDRDIVGAPSGMNNMRSYSTNFASSVNPAPPSYMMGNGKELQIKK 404
           KSC++ +   +SY YG R    APSGM+++RSYS ++ASS  P  P+ M   GKE++IKK
Sbjct: 7   KSCREGRMQIESY-YGGRP---APSGMHDLRSYSVSYASSSQP--PTQM---GKEVKIKK 57

Query: 405 VKNNQGSIGKSWSFNDPELQRKKRVAGYKVYTVEGKMKGSLRKSFRWIKD----IVYGW 569
            K++ G   KSWSFNDPELQRKKRVA YKVY VEGKMKGS RKSFRWIKD    +VYGW
Sbjct: 58  GKSSFGPSSKSWSFNDPELQRKKRVASYKVYAVEGKMKGSFRKSFRWIKDTYTQVVYGW 116


>ref|XP_002329032.1| predicted protein [Populus trichocarpa] gi|118487856|gb|ABK95751.1|
           unknown [Populus trichocarpa]
           gi|118488711|gb|ABK96166.1| unknown [Populus
           trichocarpa] gi|222839703|gb|EEE78026.1| predicted
           protein [Populus trichocarpa]
          Length = 116

 Score =  123 bits (308), Expect = 5e-26
 Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 4/117 (3%)
 Frame = +3

Query: 234 KSCKDVKDSYSYGDRDIVGAPSGMNNMRSYSTNFASSVNPAPPSYMMGNGKELQIKKVKN 413
           KSC++ +      D D   AP+ M ++RSYS ++A SV P        +GKE ++KK K+
Sbjct: 7   KSCREGRIEMEGYDED-KAAPTNMQDLRSYSVSYAVSVQPNQ------SGKEGKMKKGKS 59

Query: 414 NQGSIGKSWSFNDPELQRKKRVAGYKVYTVEGKMKGSLRKSFRWIKD----IVYGWR 572
           N  S  KSWSFNDPELQRK+RVA YKVY +EGKMKGSLRKSFRWIKD    +VYGWR
Sbjct: 60  NLESSSKSWSFNDPELQRKRRVANYKVYAIEGKMKGSLRKSFRWIKDTCTQVVYGWR 116


>ref|XP_004141806.1| PREDICTED: uncharacterized protein LOC101209615 [Cucumis sativus]
           gi|449480704|ref|XP_004155972.1| PREDICTED:
           uncharacterized LOC101209615 [Cucumis sativus]
          Length = 116

 Score =  121 bits (304), Expect = 2e-25
 Identities = 66/118 (55%), Positives = 82/118 (69%), Gaps = 5/118 (4%)
 Frame = +3

Query: 234 KSCKDVKDSYS-YGDRDIVGAPSGMNNMRSYSTNFASSVNPAPPSYMMGNGKELQIKKVK 410
           KSC++ +     Y +  I  AP+ M ++RSYS ++ASSV          + KE+++KK K
Sbjct: 7   KSCREERMQIERYNENRI--APTNMQDLRSYSVSYASSVQQNQ------SNKEVKMKKGK 58

Query: 411 NNQGSIGKSWSFNDPELQRKKRVAGYKVYTVEGKMKGSLRKSFRWIKD----IVYGWR 572
           +N GS  KSWSF DPELQRK RVAGYKVY VEGKMKGSLRKSFRWIK+    +VYGWR
Sbjct: 59  SNMGSTSKSWSFKDPELQRKTRVAGYKVYAVEGKMKGSLRKSFRWIKNTYTQVVYGWR 116


>ref|NP_001236849.1| uncharacterized protein LOC100306567 [Glycine max]
           gi|255628905|gb|ACU14797.1| unknown [Glycine max]
          Length = 116

 Score =  117 bits (292), Expect = 4e-24
 Identities = 62/111 (55%), Positives = 75/111 (67%), Gaps = 7/111 (6%)
 Frame = +3

Query: 258 SYSYGD-RDIVGAPSGMN--NMRSYSTNFASSVNPAPPSYMMGNGKELQIKKVKNNQGSI 428
           S SYGD R  +GA  G N  ++R YS ++ASSV+P           + + KK K+  GS 
Sbjct: 6   SKSYGDGRMQIGAYRGTNMQDLRCYSASYASSVHPTTTQQTQMGNSDAKFKKGKSTNGST 65

Query: 429 GKSWSFNDPELQRKKRVAGYKVYTVEGKMKGSLRKSFRWIKD----IVYGW 569
            KSWSF+DPELQRKKRVA YKVY VEGK+KGSLRKSF+W KD    +VYGW
Sbjct: 66  SKSWSFSDPELQRKKRVASYKVYAVEGKLKGSLRKSFKWFKDRCNRVVYGW 116


Top