BLASTX nr result
ID: Cnidium21_contig00002347
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00002347
(345 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285355.1| PREDICTED: pollen-specific protein SF3 [Viti... 107 1e-45
dbj|BAM05591.1| LIM transcription factor [Eucalyptus pyrocarpa] ... 109 5e-45
dbj|BAB84581.1| transcription factor LIM [Populus kitakamiensis] 106 7e-45
ref|XP_002320687.1| predicted protein [Populus trichocarpa] gi|1... 106 7e-45
dbj|BAD91878.1| transcription factor lim1 [Eucalyptus globulus] ... 109 7e-45
>ref|XP_002285355.1| PREDICTED: pollen-specific protein SF3 [Vitis vinifera]
gi|147785329|emb|CAN72849.1| hypothetical protein
VITISV_013939 [Vitis vinifera]
gi|302142193|emb|CBI19396.3| unnamed protein product
[Vitis vinifera]
Length = 197
Score = 107 bits (268), Expect(2) = 1e-45
Identities = 46/48 (95%), Positives = 48/48 (100%)
Frame = -3
Query: 343 AGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNS 200
AGTTQKCMAC+KTVYLVDKLTADNR+YHKACFRCHHCKGTLKLGNYNS
Sbjct: 4 AGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLGNYNS 51
Score = 100 bits (249), Expect(2) = 1e-45
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = -1
Query: 141 LGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIVKPDKPIDNE 1
LGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIVKP+KPID+E
Sbjct: 46 LGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIVKPEKPIDSE 92
Score = 53.1 bits (126), Expect(2) = 1e-08
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = -3
Query: 343 AGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNY 206
AGT KC+ C+ TVY +K+T + YHK+CF+C H T+ NY
Sbjct: 104 AGTRDKCVGCKNTVYPTEKVTVNGTAYHKSCFKCTHGGCTISPSNY 149
Score = 31.2 bits (69), Expect(2) = 1e-08
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 135 NYNSFEGVLYCRPHFDQLFKRTGSLDK 55
NY + EG LYC+ H QL K G+L +
Sbjct: 148 NYIAHEGRLYCKHHHTQLIKEKGNLSQ 174
>dbj|BAM05591.1| LIM transcription factor [Eucalyptus pyrocarpa]
gi|383081879|dbj|BAM05592.1| LIM transcription factor
[Eucalyptus globulus subsp. globulus]
Length = 188
Score = 109 bits (272), Expect(2) = 5e-45
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -3
Query: 343 AGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNS 200
AGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNS
Sbjct: 4 AGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNS 51
Score = 97.1 bits (240), Expect(2) = 5e-45
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = -1
Query: 141 LGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIVKPDKPIDNE 1
LGNYNSFEGVLYCRPHFDQLFKRTGSL+KSFEGTPKI KP+KPID E
Sbjct: 46 LGNYNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKIAKPEKPIDGE 92
Score = 48.9 bits (115), Expect(2) = 6e-08
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = -3
Query: 340 GTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNY 206
GT KC+ C+ TVY +K+T + YHK+CF+C H + NY
Sbjct: 105 GTRDKCVGCKSTVYPTEKVTVNGTPYHKSCFKCTHGGCVISPSNY 149
Score = 32.7 bits (73), Expect(2) = 6e-08
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 135 NYNSFEGVLYCRPHFDQLFKRTGSLDK 55
NY + EG LYCR H QL K G+L +
Sbjct: 148 NYVAHEGKLYCRHHHTQLIKEKGNLSQ 174
>dbj|BAB84581.1| transcription factor LIM [Populus kitakamiensis]
Length = 197
Score = 106 bits (264), Expect(2) = 7e-45
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = -3
Query: 343 AGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNS 200
AGTTQKCMAC+KTVYLVDKLTADNR YHKACFRCHHCKGTLKLGNYNS
Sbjct: 4 AGTTQKCMACDKTVYLVDKLTADNRAYHKACFRCHHCKGTLKLGNYNS 51
Score = 99.8 bits (247), Expect(2) = 7e-45
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = -1
Query: 141 LGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIVKPDKPIDNE 1
LGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIVKP+KP+D E
Sbjct: 46 LGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIVKPEKPVDGE 92
Score = 50.8 bits (120), Expect(2) = 3e-08
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = -3
Query: 343 AGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNY 206
AGT +KC C+ TVY +K++ + YHK+CF+C H T+ NY
Sbjct: 104 AGTREKCFGCKNTVYPTEKVSVNGTPYHKSCFKCIHGGCTISPSNY 149
Score = 32.0 bits (71), Expect(2) = 3e-08
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 135 NYNSFEGVLYCRPHFDQLFKRTGSLDK 55
NY + EG LYC+ H +QL K G+L +
Sbjct: 148 NYIAHEGRLYCKHHHNQLIKEKGNLSQ 174
>ref|XP_002320687.1| predicted protein [Populus trichocarpa] gi|18565116|dbj|BAB84582.1|
transcription factor LIM [Populus kitakamiensis]
gi|222861460|gb|EEE99002.1| predicted protein [Populus
trichocarpa] gi|225626277|gb|ACN97188.1| LIM
transcription factor [Populus trichocarpa]
gi|254047524|gb|ACT64134.1| transcription factor Lim1
[Populus deltoides] gi|254047526|gb|ACT64135.1|
transcription factor Lim1 [Populus deltoides]
Length = 197
Score = 106 bits (264), Expect(2) = 7e-45
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = -3
Query: 343 AGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNS 200
AGTTQKCMAC+KTVYLVDKLTADNR YHKACFRCHHCKGTLKLGNYNS
Sbjct: 4 AGTTQKCMACDKTVYLVDKLTADNRAYHKACFRCHHCKGTLKLGNYNS 51
Score = 99.8 bits (247), Expect(2) = 7e-45
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = -1
Query: 141 LGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIVKPDKPIDNE 1
LGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIVKP+KP+D E
Sbjct: 46 LGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIVKPEKPVDGE 92
Score = 50.8 bits (120), Expect(2) = 3e-08
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = -3
Query: 343 AGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNY 206
AGT +KC C+ TVY +K++ + YHK+CF+C H T+ NY
Sbjct: 104 AGTREKCFGCKNTVYPTEKVSVNGTPYHKSCFKCIHGGCTISPSNY 149
Score = 32.0 bits (71), Expect(2) = 3e-08
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 135 NYNSFEGVLYCRPHFDQLFKRTGSLDK 55
NY + EG LYC+ H +QL K G+L +
Sbjct: 148 NYIAHEGRLYCKHHHNQLIKEKGNLSQ 174
>dbj|BAD91878.1| transcription factor lim1 [Eucalyptus globulus]
gi|62087117|dbj|BAD91879.1| transcription factor lim1
[Eucalyptus globulus] gi|62087119|dbj|BAD91880.1|
transcription factor lim1 [Eucalyptus camaldulensis]
gi|62087121|dbj|BAD91881.1| transcription factor lim1
[Eucalyptus camaldulensis] gi|383081875|dbj|BAM05590.1|
LIM transcription factor [Eucalyptus pilularis]
Length = 188
Score = 109 bits (272), Expect(2) = 7e-45
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -3
Query: 343 AGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNS 200
AGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNS
Sbjct: 4 AGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNS 51
Score = 96.7 bits (239), Expect(2) = 7e-45
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = -1
Query: 141 LGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIVKPDKPIDNE 1
LGNYNSFEGVLYCRPHFDQLFKRTGSL+KSFEGTPKI KP+KP+D E
Sbjct: 46 LGNYNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKIAKPEKPVDGE 92
Score = 48.9 bits (115), Expect(2) = 6e-08
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = -3
Query: 340 GTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLGNY 206
GT KC+ C+ TVY +K+T + YHK+CF+C H + NY
Sbjct: 105 GTRDKCVGCKSTVYPTEKVTVNGTPYHKSCFKCTHGGCVISPSNY 149
Score = 32.7 bits (73), Expect(2) = 6e-08
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 135 NYNSFEGVLYCRPHFDQLFKRTGSLDK 55
NY + EG LYCR H QL K G+L +
Sbjct: 148 NYVAHEGKLYCRHHHTQLIKEKGNLSQ 174