BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002297
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P46486.1|PSAF_FLATR RecName: Full=Photosystem I reaction cent...   176   2e-42
gb|AAP03872.1| putative photosystem I subunit III precursor [Nic...   170   1e-40
sp|P12355.1|PSAF_SPIOL RecName: Full=Photosystem I reaction cent...   169   2e-40
pdb|2O01|F Chain F, The Structure Of A Plant Photosystem I Super...   169   2e-40
gb|AFW90599.1| photosystem I subunit III precursor (chloroplast)...   167   6e-40

>sp|P46486.1|PSAF_FLATR RecName: Full=Photosystem I reaction center subunit III,
           chloroplastic; AltName: Full=Light-harvesting complex I
           17 kDa protein; AltName: Full=PSI-F; Flags: Precursor
           gi|168173|gb|AAA33344.1| photosystem I subunit III
           [Flaveria trinervia] gi|298482|gb|AAB25669.1|
           photosystem I reaction center subunit III, PSI-RC PsaF
           [Flaveria trinervia, Peptide, 232 aa]
          Length = 232

 Score =  176 bits (446), Expect = 2e-42
 Identities = 82/85 (96%), Positives = 84/85 (98%)
 Frame = +3

Query: 3   LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAS 182
           LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLA+
Sbjct: 146 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAT 205

Query: 183 KLLFRGFSWPVAAYRAYLNGDLIDP 257
           KLLFRGFSWPVAAYR YLNG+LIDP
Sbjct: 206 KLLFRGFSWPVAAYREYLNGELIDP 230


>gb|AAP03872.1| putative photosystem I subunit III precursor [Nicotiana tabacum]
          Length = 222

 Score =  170 bits (430), Expect = 1e-40
 Identities = 77/85 (90%), Positives = 83/85 (97%)
 Frame = +3

Query: 3   LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAS 182
           LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIA+RD+KKPT KEIIIDVPLA+
Sbjct: 136 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAVRDDKKPTMKEIIIDVPLAN 195

Query: 183 KLLFRGFSWPVAAYRAYLNGDLIDP 257
           KL++RGFSWPVAAYR YLNG+LIDP
Sbjct: 196 KLIWRGFSWPVAAYREYLNGELIDP 220


>sp|P12355.1|PSAF_SPIOL RecName: Full=Photosystem I reaction center subunit III,
           chloroplastic; AltName: Full=Light-harvesting complex I
           17 kDa protein; AltName: Full=PSI-F; Flags: Precursor
           gi|268612149|pdb|2WSC|F Chain F, Improved Model Of Plant
           Photosystem I gi|268612167|pdb|2WSE|F Chain F, Improved
           Model Of Plant Photosystem I gi|268612185|pdb|2WSF|F
           Chain F, Improved Model Of Plant Photosystem I
           gi|21303|emb|CAA31523.1| PSI subunit IV preprotein (AA
           -77 to 154) [Spinacia oleracea] gi|226166|prf||1413236A
           photosystem I reaction center IV
          Length = 231

 Score =  169 bits (428), Expect = 2e-40
 Identities = 79/84 (94%), Positives = 81/84 (96%)
 Frame = +3

Query: 3   LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAS 182
           LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAS
Sbjct: 145 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAS 204

Query: 183 KLLFRGFSWPVAAYRAYLNGDLID 254
            LLFRGFSWPVAAYR  LNG+L+D
Sbjct: 205 SLLFRGFSWPVAAYRELLNGELVD 228


>pdb|2O01|F Chain F, The Structure Of A Plant Photosystem I Supercomplex At 3.4
           Angstrom Resolution gi|303324969|pdb|3LW5|F Chain F,
           Improved Model Of Plant Photosystem I
          Length = 154

 Score =  169 bits (428), Expect = 2e-40
 Identities = 79/84 (94%), Positives = 81/84 (96%)
 Frame = +3

Query: 3   LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAS 182
           LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAS
Sbjct: 68  LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAS 127

Query: 183 KLLFRGFSWPVAAYRAYLNGDLID 254
            LLFRGFSWPVAAYR  LNG+L+D
Sbjct: 128 SLLFRGFSWPVAAYRELLNGELVD 151


>gb|AFW90599.1| photosystem I subunit III precursor (chloroplast) [Solanum
           tuberosum]
          Length = 228

 Score =  167 bits (424), Expect = 6e-40
 Identities = 76/85 (89%), Positives = 82/85 (96%)
 Frame = +3

Query: 3   LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAS 182
           LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIA+RD+KKPT KEIIIDVPLA+
Sbjct: 142 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAVRDDKKPTMKEIIIDVPLAN 201

Query: 183 KLLFRGFSWPVAAYRAYLNGDLIDP 257
           +L++RGF WPVAAYR YLNGDLIDP
Sbjct: 202 RLVWRGFIWPVAAYREYLNGDLIDP 226