BLASTX nr result
ID: Cnidium21_contig00002297
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00002297 (349 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P46486.1|PSAF_FLATR RecName: Full=Photosystem I reaction cent... 176 2e-42 gb|AAP03872.1| putative photosystem I subunit III precursor [Nic... 170 1e-40 sp|P12355.1|PSAF_SPIOL RecName: Full=Photosystem I reaction cent... 169 2e-40 pdb|2O01|F Chain F, The Structure Of A Plant Photosystem I Super... 169 2e-40 gb|AFW90599.1| photosystem I subunit III precursor (chloroplast)... 167 6e-40 >sp|P46486.1|PSAF_FLATR RecName: Full=Photosystem I reaction center subunit III, chloroplastic; AltName: Full=Light-harvesting complex I 17 kDa protein; AltName: Full=PSI-F; Flags: Precursor gi|168173|gb|AAA33344.1| photosystem I subunit III [Flaveria trinervia] gi|298482|gb|AAB25669.1| photosystem I reaction center subunit III, PSI-RC PsaF [Flaveria trinervia, Peptide, 232 aa] Length = 232 Score = 176 bits (446), Expect = 2e-42 Identities = 82/85 (96%), Positives = 84/85 (98%) Frame = +3 Query: 3 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAS 182 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLA+ Sbjct: 146 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAT 205 Query: 183 KLLFRGFSWPVAAYRAYLNGDLIDP 257 KLLFRGFSWPVAAYR YLNG+LIDP Sbjct: 206 KLLFRGFSWPVAAYREYLNGELIDP 230 >gb|AAP03872.1| putative photosystem I subunit III precursor [Nicotiana tabacum] Length = 222 Score = 170 bits (430), Expect = 1e-40 Identities = 77/85 (90%), Positives = 83/85 (97%) Frame = +3 Query: 3 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAS 182 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIA+RD+KKPT KEIIIDVPLA+ Sbjct: 136 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAVRDDKKPTMKEIIIDVPLAN 195 Query: 183 KLLFRGFSWPVAAYRAYLNGDLIDP 257 KL++RGFSWPVAAYR YLNG+LIDP Sbjct: 196 KLIWRGFSWPVAAYREYLNGELIDP 220 >sp|P12355.1|PSAF_SPIOL RecName: Full=Photosystem I reaction center subunit III, chloroplastic; AltName: Full=Light-harvesting complex I 17 kDa protein; AltName: Full=PSI-F; Flags: Precursor gi|268612149|pdb|2WSC|F Chain F, Improved Model Of Plant Photosystem I gi|268612167|pdb|2WSE|F Chain F, Improved Model Of Plant Photosystem I gi|268612185|pdb|2WSF|F Chain F, Improved Model Of Plant Photosystem I gi|21303|emb|CAA31523.1| PSI subunit IV preprotein (AA -77 to 154) [Spinacia oleracea] gi|226166|prf||1413236A photosystem I reaction center IV Length = 231 Score = 169 bits (428), Expect = 2e-40 Identities = 79/84 (94%), Positives = 81/84 (96%) Frame = +3 Query: 3 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAS 182 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAS Sbjct: 145 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAS 204 Query: 183 KLLFRGFSWPVAAYRAYLNGDLID 254 LLFRGFSWPVAAYR LNG+L+D Sbjct: 205 SLLFRGFSWPVAAYRELLNGELVD 228 >pdb|2O01|F Chain F, The Structure Of A Plant Photosystem I Supercomplex At 3.4 Angstrom Resolution gi|303324969|pdb|3LW5|F Chain F, Improved Model Of Plant Photosystem I Length = 154 Score = 169 bits (428), Expect = 2e-40 Identities = 79/84 (94%), Positives = 81/84 (96%) Frame = +3 Query: 3 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAS 182 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAS Sbjct: 68 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAS 127 Query: 183 KLLFRGFSWPVAAYRAYLNGDLID 254 LLFRGFSWPVAAYR LNG+L+D Sbjct: 128 SLLFRGFSWPVAAYRELLNGELVD 151 >gb|AFW90599.1| photosystem I subunit III precursor (chloroplast) [Solanum tuberosum] Length = 228 Score = 167 bits (424), Expect = 6e-40 Identities = 76/85 (89%), Positives = 82/85 (96%) Frame = +3 Query: 3 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLAS 182 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIA+RD+KKPT KEIIIDVPLA+ Sbjct: 142 LPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAVRDDKKPTMKEIIIDVPLAN 201 Query: 183 KLLFRGFSWPVAAYRAYLNGDLIDP 257 +L++RGF WPVAAYR YLNGDLIDP Sbjct: 202 RLVWRGFIWPVAAYREYLNGDLIDP 226