BLASTX nr result

ID: Cnidium21_contig00002281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002281
         (1372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266909.1| PREDICTED: eukaryotic translation initiation...   605   e-171
ref|XP_004152102.1| PREDICTED: eukaryotic translation initiation...   590   e-166
ref|XP_002320437.1| predicted protein [Populus trichocarpa] gi|2...   589   e-166
gb|ABK92468.1| unknown [Populus trichocarpa]                          589   e-166
ref|XP_003552657.1| PREDICTED: eukaryotic translation initiation...   577   e-162

>ref|XP_002266909.1| PREDICTED: eukaryotic translation initiation factor 3 subunit H
            [Vitis vinifera] gi|296089621|emb|CBI39440.3| unnamed
            protein product [Vitis vinifera]
          Length = 337

 Score =  605 bits (1560), Expect = e-171
 Identities = 299/337 (88%), Positives = 312/337 (92%)
 Frame = +2

Query: 62   MAQPAVRSFLQVAVTEEVASPLRVVQIEGLAMLKIIKHCKEFSPALVTGQLLGLDVGSVL 241
            MA    RSFLQVA TEEVASPLRVVQIEGL +LKIIKHCKEFSPALVTGQLLGLDVGSVL
Sbjct: 1    MANTMARSFLQVAATEEVASPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVL 60

Query: 242  EVTNCFPFPIRXXXXXXXXXGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIE 421
            EVTNCFPFPIR         GANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIE
Sbjct: 61   EVTNCFPFPIREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIE 120

Query: 422  TFMNYQENIKRCVCIIYDPSKSNQGVLALKALKLSDSFMELYRNNNLTGEKLREKNLSWV 601
            TFMNYQENI+RCVCIIYDPS+SNQGVLALKALKLSDSFMELYRNNN TGEKLREKNLSWV
Sbjct: 121  TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRNNNFTGEKLREKNLSWV 180

Query: 602  DIFEEIPIKVSNSALISAFMTELEADTPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 781
            DIFEEIPIKVSNSALISAFMTELEADTPVTQCDYDRLQLSTNP+MERN+EFLIECMDDLS
Sbjct: 181  DIFEEIPIKVSNSALISAFMTELEADTPVTQCDYDRLQLSTNPYMERNLEFLIECMDDLS 240

Query: 782  MEQQKFQYYYRNLSRXXXXXXSWLQKRRSENVTRKAAGEEPLPEEDPSNPIFKPIPEPPR 961
            MEQQKFQ+YYRNLSR      +WLQKRR+EN+ RK AGE+PLPEEDP+NPIFKPIPEP R
Sbjct: 241  MEQQKFQFYYRNLSRQQGQQQAWLQKRRAENMARKTAGEDPLPEEDPANPIFKPIPEPSR 300

Query: 962  LDSFLITNQISNYCNQINGVAGQSFSKLFLMKALHEN 1072
            LDSFLITNQISNYCNQINGVAGQSFS+L+LMKALHEN
Sbjct: 301  LDSFLITNQISNYCNQINGVAGQSFSRLYLMKALHEN 337


>ref|XP_004152102.1| PREDICTED: eukaryotic translation initiation factor 3 subunit H-like
            [Cucumis sativus] gi|449521699|ref|XP_004167867.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit H-like [Cucumis sativus]
          Length = 337

 Score =  590 bits (1521), Expect = e-166
 Identities = 290/337 (86%), Positives = 310/337 (91%)
 Frame = +2

Query: 62   MAQPAVRSFLQVAVTEEVASPLRVVQIEGLAMLKIIKHCKEFSPALVTGQLLGLDVGSVL 241
            MA    RSFLQVA TEEVASPLRVVQIEGL +LKIIKHCKEFSPALVTGQLLGLDVGSVL
Sbjct: 1    MANSMARSFLQVAATEEVASPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVL 60

Query: 242  EVTNCFPFPIRXXXXXXXXXGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIE 421
            EVTNCFPFP R         GANYQLEMMRCLREVNVDNNTVGWYQST LGS+QTVELIE
Sbjct: 61   EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 422  TFMNYQENIKRCVCIIYDPSKSNQGVLALKALKLSDSFMELYRNNNLTGEKLREKNLSWV 601
            TFMNYQENI+RCVCIIYDPS+SNQGVLALKALKLSDSFMELYR N+ TGEKLREKNLSWV
Sbjct: 121  TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRTNSFTGEKLREKNLSWV 180

Query: 602  DIFEEIPIKVSNSALISAFMTELEADTPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 781
            DIFEEIPIKVSNSALISAFMTELE+D+PVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181  DIFEEIPIKVSNSALISAFMTELESDSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 782  MEQQKFQYYYRNLSRXXXXXXSWLQKRRSENVTRKAAGEEPLPEEDPSNPIFKPIPEPPR 961
            +EQQKFQ+YYR+L+R      SWLQKRR+EN+TRKAAGEEPLPEEDP+NPIFKP+PEP R
Sbjct: 241  VEQQKFQFYYRSLTRQQAQQQSWLQKRRAENMTRKAAGEEPLPEEDPTNPIFKPLPEPSR 300

Query: 962  LDSFLITNQISNYCNQINGVAGQSFSKLFLMKALHEN 1072
            LDS+LITNQI+NYCNQINGVAGQSF++L LMKALH+N
Sbjct: 301  LDSYLITNQIANYCNQINGVAGQSFNRLHLMKALHDN 337


>ref|XP_002320437.1| predicted protein [Populus trichocarpa] gi|222861210|gb|EEE98752.1|
            predicted protein [Populus trichocarpa]
          Length = 333

 Score =  589 bits (1519), Expect = e-166
 Identities = 290/331 (87%), Positives = 306/331 (92%)
 Frame = +2

Query: 80   RSFLQVAVTEEVASPLRVVQIEGLAMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCF 259
            RSFLQVA TEEVA PLR VQIEGLA+LKIIKHCKEFSP+LVTGQLLGLDVGSVLEVTNCF
Sbjct: 3    RSFLQVAATEEVAPPLRAVQIEGLAVLKIIKHCKEFSPSLVTGQLLGLDVGSVLEVTNCF 62

Query: 260  PFPIRXXXXXXXXXGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFMNYQ 439
            PFPIR         GANYQLEMMRCLREVNVDNNTVGWYQS L G FQTVELIETFMNYQ
Sbjct: 63   PFPIREEDEEIEAEGANYQLEMMRCLREVNVDNNTVGWYQSMLFGCFQTVELIETFMNYQ 122

Query: 440  ENIKRCVCIIYDPSKSNQGVLALKALKLSDSFMELYRNNNLTGEKLREKNLSWVDIFEEI 619
            ENI+RCVCIIYDPS++NQGVLALKALKLSDSFM+LYRNNN TGEKLREKNLSWVDIFEEI
Sbjct: 123  ENIRRCVCIIYDPSRANQGVLALKALKLSDSFMDLYRNNNFTGEKLREKNLSWVDIFEEI 182

Query: 620  PIKVSNSALISAFMTELEADTPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSMEQQKF 799
            PIKVSNSALISAFMTELE DTPVTQCDYDRLQLST+P++ERNVEFLIECMDDLSMEQQKF
Sbjct: 183  PIKVSNSALISAFMTELEDDTPVTQCDYDRLQLSTSPYLERNVEFLIECMDDLSMEQQKF 242

Query: 800  QYYYRNLSRXXXXXXSWLQKRRSENVTRKAAGEEPLPEEDPSNPIFKPIPEPPRLDSFLI 979
            QYYYRNLSR      +WLQKRRSEN++RKAAGEEPLPEEDP NPIFKPIPEP RLDSFLI
Sbjct: 243  QYYYRNLSRQQAQQQAWLQKRRSENMSRKAAGEEPLPEEDPLNPIFKPIPEPSRLDSFLI 302

Query: 980  TNQISNYCNQINGVAGQSFSKLFLMKALHEN 1072
            TNQI+NYCNQINGV+GQSFS+L+LMKALHEN
Sbjct: 303  TNQIANYCNQINGVSGQSFSRLYLMKALHEN 333


>gb|ABK92468.1| unknown [Populus trichocarpa]
          Length = 341

 Score =  589 bits (1519), Expect = e-166
 Identities = 290/331 (87%), Positives = 306/331 (92%)
 Frame = +2

Query: 80   RSFLQVAVTEEVASPLRVVQIEGLAMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCF 259
            RSFLQVA TEEVA PLR VQIEGLA+LKIIKHCKEFSP+LVTGQLLGLDVGSVLEVTNCF
Sbjct: 11   RSFLQVAATEEVAPPLRAVQIEGLAVLKIIKHCKEFSPSLVTGQLLGLDVGSVLEVTNCF 70

Query: 260  PFPIRXXXXXXXXXGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFMNYQ 439
            PFPIR         GANYQLEMMRCLREVNVDNNTVGWYQS L G FQTVELIETFMNYQ
Sbjct: 71   PFPIREEDEEIEAEGANYQLEMMRCLREVNVDNNTVGWYQSMLFGCFQTVELIETFMNYQ 130

Query: 440  ENIKRCVCIIYDPSKSNQGVLALKALKLSDSFMELYRNNNLTGEKLREKNLSWVDIFEEI 619
            ENI+RCVCIIYDPS++NQGVLALKALKLSDSFM+LYRNNN TGEKLREKNLSWVDIFEEI
Sbjct: 131  ENIRRCVCIIYDPSRANQGVLALKALKLSDSFMDLYRNNNFTGEKLREKNLSWVDIFEEI 190

Query: 620  PIKVSNSALISAFMTELEADTPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSMEQQKF 799
            PIKVSNSALISAFMTELE DTPVTQCDYDRLQLST+P++ERNVEFLIECMDDLSMEQQKF
Sbjct: 191  PIKVSNSALISAFMTELEDDTPVTQCDYDRLQLSTSPYLERNVEFLIECMDDLSMEQQKF 250

Query: 800  QYYYRNLSRXXXXXXSWLQKRRSENVTRKAAGEEPLPEEDPSNPIFKPIPEPPRLDSFLI 979
            QYYYRNLSR      +WLQKRRSEN++RKAAGEEPLPEEDP NPIFKPIPEP RLDSFLI
Sbjct: 251  QYYYRNLSRQQAQQQAWLQKRRSENMSRKAAGEEPLPEEDPLNPIFKPIPEPSRLDSFLI 310

Query: 980  TNQISNYCNQINGVAGQSFSKLFLMKALHEN 1072
            TNQI+NYCNQINGV+GQSFS+L+LMKALHEN
Sbjct: 311  TNQIANYCNQINGVSGQSFSRLYLMKALHEN 341


>ref|XP_003552657.1| PREDICTED: eukaryotic translation initiation factor 3 subunit H-like
            [Glycine max]
          Length = 337

 Score =  577 bits (1487), Expect = e-162
 Identities = 284/337 (84%), Positives = 306/337 (90%)
 Frame = +2

Query: 62   MAQPAVRSFLQVAVTEEVASPLRVVQIEGLAMLKIIKHCKEFSPALVTGQLLGLDVGSVL 241
            MA    RSFLQVA TEE A PLRVVQIEGL +LKIIKHCK+ SP+LVTGQLLGLDVGSVL
Sbjct: 1    MATTPARSFLQVAATEEAAPPLRVVQIEGLVILKIIKHCKDHSPSLVTGQLLGLDVGSVL 60

Query: 242  EVTNCFPFPIRXXXXXXXXXGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIE 421
            EVTNCFPFP+R         GANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIE
Sbjct: 61   EVTNCFPFPMREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIE 120

Query: 422  TFMNYQENIKRCVCIIYDPSKSNQGVLALKALKLSDSFMELYRNNNLTGEKLREKNLSWV 601
            TFMNYQENI+RCVCIIYDPS+S+QGVLALKALKLSDSFMELYR+NN TGEKLREKNLSWV
Sbjct: 121  TFMNYQENIRRCVCIIYDPSRSDQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSWV 180

Query: 602  DIFEEIPIKVSNSALISAFMTELEADTPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 781
            DIFEEIPIKVSNSALISAFMTELE DTPVTQCDYDRLQLST+  MERN EFLIECMDDLS
Sbjct: 181  DIFEEIPIKVSNSALISAFMTELEPDTPVTQCDYDRLQLSTSSLMERNTEFLIECMDDLS 240

Query: 782  MEQQKFQYYYRNLSRXXXXXXSWLQKRRSENVTRKAAGEEPLPEEDPSNPIFKPIPEPPR 961
            +EQQKFQ+YYR+LSR      +WLQKRR+EN+ RKAAGEEPLPEEDPSNPIFKP+PEP R
Sbjct: 241  LEQQKFQFYYRSLSRQQAQQQAWLQKRRTENMARKAAGEEPLPEEDPSNPIFKPLPEPSR 300

Query: 962  LDSFLITNQISNYCNQINGVAGQSFSKLFLMKALHEN 1072
            L+SFLITNQISNYCNQINGV+GQSF++L+LMKALHE+
Sbjct: 301  LESFLITNQISNYCNQINGVSGQSFNRLYLMKALHED 337


Top