BLASTX nr result

ID: Cnidium21_contig00002265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002265
         (3563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF98996.1| nucleoporin 98 [Daucus carota]                        724   0.0  
ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup9...   602   0.0  
ref|XP_003539631.1| PREDICTED: uncharacterized protein LOC100789...   529   0.0  
ref|XP_003543180.1| PREDICTED: nuclear pore complex protein Nup9...   533   0.0  
ref|XP_003543179.1| PREDICTED: nuclear pore complex protein Nup9...   525   0.0  

>dbj|BAF98996.1| nucleoporin 98 [Daucus carota]
          Length = 1005

 Score =  724 bits (1869), Expect(2) = 0.0
 Identities = 353/373 (94%), Positives = 360/373 (96%)
 Frame = +3

Query: 2136 YGQSSVAQNTAVVQQAPVLNPFGTLPAMPSMSIGRAGTSPSIQYGISSLPVVDKPAPARI 2315
            YGQSS   NTAVVQQAPVLNPFGTLPAMP MSIGRAGTSPSIQYGISSLPVVDKPAPARI
Sbjct: 633  YGQSSATPNTAVVQQAPVLNPFGTLPAMPLMSIGRAGTSPSIQYGISSLPVVDKPAPARI 692

Query: 2316 SSLLTSRHLSQRRVRLPARKYHPKNNGLKVPFFSDDEETPTTPKADTLFIPRENPRALVI 2495
            SSLLTSRHLSQRRVRLPARKYHPKNNGLKVPFFSDDEE PTTPKADTLFIPRENPRALVI
Sbjct: 693  SSLLTSRHLSQRRVRLPARKYHPKNNGLKVPFFSDDEEAPTTPKADTLFIPRENPRALVI 752

Query: 2496 RPLEQWPGRTNGEKRSLSKEHTPIQENDEDIVKNGSTDEQSDHVKSGQKPNGVHDEHFGQ 2675
            RPLEQWPGRTNG+KRSLSKEHTP+Q++DEDI  NG TDEQSDHVK GQKPNGVHDEH  Q
Sbjct: 753  RPLEQWPGRTNGDKRSLSKEHTPVQKSDEDIANNGPTDEQSDHVKLGQKPNGVHDEHLVQ 812

Query: 2676 KEDAYITLTGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPRIQELAAKERAEPGFCRR 2855
            K+DAYITLTGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPRIQELAAKERAEPGFCRR
Sbjct: 813  KDDAYITLTGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPRIQELAAKERAEPGFCRR 872

Query: 2856 VKDFVVGRHGYGNIKFLGETDVRRLDLESLVQFNLREVIVYMDESKKPPVGQGLNKPAVV 3035
            VKDFVVGRHGYG+IKFLGETDVRRLDLESLVQFN REVIVYMDESKKPPVGQGLNKPAVV
Sbjct: 873  VKDFVVGRHGYGSIKFLGETDVRRLDLESLVQFNHREVIVYMDESKKPPVGQGLNKPAVV 932

Query: 3036 TLLNVKCFDKKTNRHYTEGPRIDKYKEMLRKKAEDQGAEFVSYDPIEGEWAFKVSHFSRY 3215
            TLLNVKCFDKKT RH+TEGPRIDKYKEMLRKKAEDQGAEFVSYDPIEGEWAFKVSHFSRY
Sbjct: 933  TLLNVKCFDKKTGRHFTEGPRIDKYKEMLRKKAEDQGAEFVSYDPIEGEWAFKVSHFSRY 992

Query: 3216 ELRDEDLGLDDWE 3254
            ELRDEDLGLDDWE
Sbjct: 993  ELRDEDLGLDDWE 1005



 Score =  408 bits (1048), Expect(2) = 0.0
 Identities = 223/354 (62%), Positives = 231/354 (65%), Gaps = 4/354 (1%)
 Frame = +1

Query: 1000 GTSPSPFGAQSSAFGAQTTXXXXXXXXXXXXXXXXQRGGSRVAAYTPTAEADGGTGTQPA 1179
            G SPSPFGA SS FGAQT+                QRGGSRVAAYTPTAEAD GTGTQPA
Sbjct: 283  GASPSPFGAPSSTFGAQTSSPAFGSPGFGSSTFGGQRGGSRVAAYTPTAEADAGTGTQPA 342

Query: 1180 GKLESISAMPVYKDKSHEELRWEDYQLGDKXXXXXXXXXXXXXXXXXNTQSNPFSSSSTF 1359
            GKLESISAMPVYKDKSHEELRWEDYQLGDK                 NTQ NPFSSSSTF
Sbjct: 343  GKLESISAMPVYKDKSHEELRWEDYQLGDKGGPNSAAQPAGAAGFGTNTQPNPFSSSSTF 402

Query: 1360 GQTSA--NPFSSTTPTNPFGQKSAPFSTPXXXXXXXXXXXXXXXXXXNANXXXXXXXXXX 1533
            GQ SA  NPFSS   TNPFGQKSAPFSTP                  NAN          
Sbjct: 403  GQASAPANPFSSNNATNPFGQKSAPFSTPGFAASTSAFGSSAFGSTTNANPFGSTSSAAP 462

Query: 1534 XXXXXXXXXXXXXXXXXXXXXXXXXXXGNSTSIFGSAPTQGTTST-FNTGLNFGNTQQSP 1710
                                       G STSIFGS   QGTTS+ FN+GLNFGNTQQSP
Sbjct: 463  SLFGSTTSTFGGTPASPFGSAATTSAFGTSTSIFGSTSAQGTTSSPFNSGLNFGNTQQSP 522

Query: 1711 LFQSSTPAIGQSGSAFGQAPSFGQTTPGFGQTNMFNTSSTGFG-NMFXXXXXXXXXXXXM 1887
            LFQS+TP+IGQS SAFGQ PSFGQTTPGFGQ NMFNT STGFG NMF            M
Sbjct: 523  LFQSNTPSIGQSSSAFGQTPSFGQTTPGFGQANMFNTPSTGFGANMFSTTPSLLTTSSQM 582

Query: 1888 GFGQTMPSQSSPFQLAQPSQNAGAFGNFGQTQAAGLSGLGGTPGFYGQSNYGQS 2049
            GFGQTMPSQSSPFQL+QPSQNAGAFGNFGQTQAAGLSG GGTPG +GQS+YGQS
Sbjct: 583  GFGQTMPSQSSPFQLSQPSQNAGAFGNFGQTQAAGLSGFGGTPGIFGQSSYGQS 636



 Score =  239 bits (610), Expect = 4e-60
 Identities = 129/215 (60%), Positives = 134/215 (62%)
 Frame = +1

Query: 169 MFGSTNPFGQSSTSPFGTQSAFGQTNSGNSNPFAPNPFGSTTPFGTQTGSSLFGGTATGV 348
           MFGSTNPFGQSSTSPFGTQS FGQ +SG+SNPFAPNPFGSTTPFGTQTG SLFGG+ATGV
Sbjct: 1   MFGSTNPFGQSSTSPFGTQSTFGQASSGSSNPFAPNPFGSTTPFGTQTGGSLFGGSATGV 60

Query: 349 FGSNQASSPLPSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKPSFG 528
           FGSNQASSPLPSTP                                        QKPSFG
Sbjct: 61  FGSNQASSPLPSTPVFGASSSPAFGSSVPAFGASSTSGFGNTSSSSFGGSSVFGQKPSFG 120

Query: 529 GFGSSTAQTSPFGSTFQQSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGAT 708
           GFGSST QTSPFGSTFQQSQ                                    +GAT
Sbjct: 121 GFGSSTTQTSPFGSTFQQSQPAFGSNLFGSTPFGGSSQSAFSAPSTPTFGSSSTPAFGAT 180

Query: 709 NPPAFGATSSPAFGSVSTPTFGSTGNAFGVSSAPV 813
           N PAFGATSSPAFGSVSTPTFGSTGNAFGVS+APV
Sbjct: 181 NTPAFGATSSPAFGSVSTPTFGSTGNAFGVSNAPV 215


>ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
            [Vitis vinifera]
          Length = 1013

 Score =  602 bits (1551), Expect(2) = 0.0
 Identities = 295/374 (78%), Positives = 330/374 (88%), Gaps = 1/374 (0%)
 Frame = +3

Query: 2136 YGQSSVAQNTAVVQQAPVLNPFGTLPAMPSMSIGRAGTSPSIQYGISSLPVVDKPAPARI 2315
            +GQSS AQN+ VVQ AP  NPFGTLPAMP MSIGR GT+PSIQYGISS+PVVDKPAP RI
Sbjct: 636  FGQSSAAQNSVVVQPAPAANPFGTLPAMPQMSIGRTGTAPSIQYGISSMPVVDKPAPVRI 695

Query: 2316 SSLLTSRHLSQRRVRLPARKYHPKNNGLKVPFFSDDEETPTTPKADTLFIPRENPRALVI 2495
            SSLLTSRHLSQRR+RLPARKYHPKN+  KVPFFSDDEETP+TPKAD LF+PRENPR+LVI
Sbjct: 696  SSLLTSRHLSQRRIRLPARKYHPKNDAPKVPFFSDDEETPSTPKADALFVPRENPRSLVI 755

Query: 2496 RPLEQWPGRTNGEKRSLSKEHT-PIQENDEDIVKNGSTDEQSDHVKSGQKPNGVHDEHFG 2672
            RP+EQW  R+N EK S  KE + P+ EN  ++V+NG   E+   +K  QKPNGVHD+H  
Sbjct: 756  RPMEQWSLRSNAEKTSPLKEASKPVHEN-ANLVENGLAKERIHTMKPNQKPNGVHDDHSI 814

Query: 2673 QKEDAYITLTGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPRIQELAAKERAEPGFCR 2852
            QK D+YITLTGHRAGEAAIVYEHGADIEALMPKLR SDYYTEPRIQELAAKERAEPGFCR
Sbjct: 815  QKGDSYITLTGHRAGEAAIVYEHGADIEALMPKLRRSDYYTEPRIQELAAKERAEPGFCR 874

Query: 2853 RVKDFVVGRHGYGNIKFLGETDVRRLDLESLVQFNLREVIVYMDESKKPPVGQGLNKPAV 3032
            RVKDFVVGRHGYG+IKF+GETDVRRLDLESLVQFN REVIVYMD+SKKPPVGQGLNKPA 
Sbjct: 875  RVKDFVVGRHGYGSIKFMGETDVRRLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAE 934

Query: 3033 VTLLNVKCFDKKTNRHYTEGPRIDKYKEMLRKKAEDQGAEFVSYDPIEGEWAFKVSHFSR 3212
            VTLLN+KCFDKKT   YTEGP+I KYKEML++KAEDQGAEFVSYDP++GEW F+V+HFS+
Sbjct: 935  VTLLNIKCFDKKTGVQYTEGPKIGKYKEMLKRKAEDQGAEFVSYDPMKGEWKFRVNHFSK 994

Query: 3213 YELRDEDLGLDDWE 3254
            YEL DE+  +DDW+
Sbjct: 995  YELGDEE--IDDWD 1006



 Score =  474 bits (1221), Expect(2) = 0.0
 Identities = 287/640 (44%), Positives = 330/640 (51%), Gaps = 13/640 (2%)
 Frame = +1

Query: 169  MFGSTNPFGQSSTSPFGTQSAFGQTNSGNSNPFAPNPFGSTTPFGTQTGSSLFGGTATGV 348
            MFGS+NPFGQSS+SPFG+QS FGQTN+  +NPFAP PFGSTTPFG QTG S+FGGT+TGV
Sbjct: 1    MFGSSNPFGQSSSSPFGSQSVFGQTNNATTNPFAPKPFGSTTPFGAQTGGSIFGGTSTGV 60

Query: 349  FGSNQASSPLPSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKPSFG 528
            FG+ Q+SSPLPST                                         QKP FG
Sbjct: 61   FGATQSSSPLPST-ATFGASSSPAFGSSVPAFGASSTPAFGSSSSSFGGSSVFGQKPGFG 119

Query: 529  GFGSSTAQTSPFGSTFQQSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGAT 708
            GFGS+  QTSPFGS FQQSQ                                    +GAT
Sbjct: 120  GFGSTPTQTSPFGSAFQQSQPAFGSSLFGSSTPFGASQAAFGASSTPAFAATSTPAFGAT 179

Query: 709  NPPAFGATSSPAFGSVSTPTFGSTGNAFGVSSAPVXXXXXXXXXXXXXXXXXXXXXXXXX 888
            + PAFGATS+ AFGS  +PTFGSTG+AFG S APV                         
Sbjct: 180  STPAFGATSTSAFGSTPSPTFGSTGSAFGGSGAPVFASSGAFGASSTPVFGSSTTSAFGT 239

Query: 889  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSP-----SPFGAQSSAFGAQT 1053
                                                 G+SP     SPFGAQSS FGAQ 
Sbjct: 240  SSTPAFGASSTPAFGASSTPSFSFGSTPAFGQSTAAFGSSPFGTATSPFGAQSSPFGAQA 299

Query: 1054 TXXXXXXXXXXXXXXXXQRGGSRVAAYTPTAEADGGTGTQPAGKLESISAMPVYKDKSHE 1233
            T                QRGGSRVAAYTPT E D G+GTQP GKLESISAMPVYKDKSHE
Sbjct: 300  TTPTFGGTGFGQSAFGGQRGGSRVAAYTPTTEVDSGSGTQPVGKLESISAMPVYKDKSHE 359

Query: 1234 ELRWEDYQLGDK-XXXXXXXXXXXXXXXXXNTQSNPFSSSSTFGQTSANPFSSTTPTNPF 1410
            ELRWEDYQLGDK                  NTQSNPF++S  FGQ+SANPFSS+T +NPF
Sbjct: 360  ELRWEDYQLGDKGGPAPASQSTGGVGFGASNTQSNPFAASPAFGQSSANPFSSSTSSNPF 419

Query: 1411 GQKSAPFSTPXXXXXXXXXXXXXXXXXXNANXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1590
              ++  F +                   + +                             
Sbjct: 420  APRTPAFGSSGFGGSSTPAFSSSPFGASSTSNPFGSTSSATPSIFGASSTPPFGASSSPS 479

Query: 1591 XXXXXXXXG--NSTSIFGSAPTQGTTSTFNTGLNFGNTQQSPLFQSSTPAIGQSGSAFGQ 1764
                    G  +S SIFGS P QGT   F +GLNFGNTQ SPLFQSSTP++GQ+ SAFGQ
Sbjct: 480  LFGASSSSGFGSSPSIFGSTPAQGTAPAFGSGLNFGNTQSSPLFQSSTPSLGQTASAFGQ 539

Query: 1765 APS-FGQ-TTPGFGQTNMFNTSSTGF-GNMFXXXXXXXXXXXXMGFGQTMPSQSSPFQLA 1935
            + S FGQ TTP FGQ+++FNT STGF GN+F            +GFGQT PS S+PFQ A
Sbjct: 540  STSAFGQSTTPSFGQSSIFNTPSTGFGGNLFSSAPPLLSTSNPVGFGQTTPSLSTPFQPA 599

Query: 1936 QPSQNAGAFG--NFGQTQAAGLSGLGGTPGFYGQSNYGQS 2049
            QP+Q  GAFG  NFGQTQAAG SG GG    +G + +GQS
Sbjct: 600  QPAQTIGAFGFSNFGQTQAAGASGFGGGSNIFGSNAFGQS 639


>ref|XP_003539631.1| PREDICTED: uncharacterized protein LOC100789177 [Glycine max]
          Length = 1007

 Score =  529 bits (1363), Expect(2) = 0.0
 Identities = 258/369 (69%), Positives = 298/369 (80%), Gaps = 1/369 (0%)
 Frame = +3

Query: 2145 SSVAQNTAVVQQAPVLNPFGTLPAMPSMSIGRAGTSPSIQYGISSLPVVDKPAPARISSL 2324
            SS   ++  VQ  P  NPFGTLPA+P MSIGR GT+PSIQYGISS+P +DKPAP RISSL
Sbjct: 638  SSTPLSSVAVQAVPNTNPFGTLPALPQMSIGRVGTTPSIQYGISSMPALDKPAPVRISSL 697

Query: 2325 LTSRHLSQRRVRLPARKYHPKNNGLKVPFFSDDEETPTTPKADTLFIPRENPRALVIRPL 2504
            LTSRHLSQRR+RLP RKYH KN+G KV FFSDDE+TPTTPKAD LFIPRENPRAL+I P+
Sbjct: 698  LTSRHLSQRRIRLPVRKYHSKNDGPKVAFFSDDEDTPTTPKADALFIPRENPRALIICPV 757

Query: 2505 EQWPGRTNGEKRSLSKEHTPIQENDEDIVKNGSTDEQSDHVKSGQKPNGVHDEHFGQKED 2684
            EQWPG+ + +  +      P+ EN E  V+NG   EQ+  + +    NG +++H  QK D
Sbjct: 758  EQWPGKASEKASTFKDRSIPVNEN-ESAVENGFVKEQAQPISTKPTSNGSNEDHSPQKAD 816

Query: 2685 AYITLTGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPRIQELAAKERAEPGFCRRVKD 2864
             Y TL GHRAGEAAIVYEHGAD+EALMPKLR SDYYT PRI ELAAKERAEPGFC  VKD
Sbjct: 817  VYKTLRGHRAGEAAIVYEHGADVEALMPKLRRSDYYTLPRIHELAAKERAEPGFCSHVKD 876

Query: 2865 FVVGRHGYGNIKFLGETDVRRLDLESLVQFNLREVIVYMDESKKPPVGQGLNKPAVVTLL 3044
            FVVGR GYG+I+FLGETD+R LDLESL+QFN REVIVYMD+SKKPPVGQGLNKPA VTLL
Sbjct: 877  FVVGRQGYGSIRFLGETDIRGLDLESLIQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLL 936

Query: 3045 NVKCFDKKTNRHYTEGPRIDKYKEMLRKKAEDQGAEFVSYDPIEGEWAFKVSHFSRYEL- 3221
            N+KCFDKKT   YTEGP+I+KYKEML++K EDQGAEFVSYDP +GEW  +VSHFS Y+L 
Sbjct: 937  NIKCFDKKTGHQYTEGPKIEKYKEMLKRKTEDQGAEFVSYDPTKGEWKIRVSHFSIYKLV 996

Query: 3222 RDEDLGLDD 3248
             DE+  ++D
Sbjct: 997  EDENSRIND 1005



 Score =  379 bits (974), Expect(2) = 0.0
 Identities = 262/662 (39%), Positives = 308/662 (46%), Gaps = 37/662 (5%)
 Frame = +1

Query: 169  MFGSTNPFGQSSTSPFGTQSAFGQTNSGNSNPFAPNPFGSTTPFGTQTGSSLFGGTATGV 348
            MFGS NPFGQSS+SPFG+QS FGQTNS +SNPFAP PFGST PFG+QTG S+FGGT+TGV
Sbjct: 1    MFGS-NPFGQSSSSPFGSQSVFGQTNS-SSNPFAPKPFGSTAPFGSQTGGSIFGGTSTGV 58

Query: 349  FGSNQASSPLPSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKPSFG 528
            FG+ Q +SP  ++                                         QKP+FG
Sbjct: 59   FGTAQPASPFGAS-------SSPAFGSSQPAFGSSSTPAFGSSSSSFGGSSVFGQKPAFG 111

Query: 529  GFGSSTAQTSPFGSTFQQSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGAT 708
            GFGS+  QTSPFG+                                          +GAT
Sbjct: 112  GFGSTPTQTSPFGAAQPSQPAFGSSIFGSSTPFGASSQPAFGATSTPAFGATSTPAFGAT 171

Query: 709  NPPAFGATSSPAFGSVST------------------------PTFGSTGNAFGVSSAPVX 816
            + PAFGATS+PAFG+ ST                        PTFGSTG+AFGVSS PV 
Sbjct: 172  STPAFGATSTPAFGATSTPAFGATSSPAFGATSTPAFGSTSSPTFGSTGSAFGVSSTPVF 231

Query: 817  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 996
                                                                        
Sbjct: 232  GSGGAFGASSNPMFGSSSTSAFGTSSSPFGASSTPAFGASSTPAFSFGSTPQAFGQSSSA 291

Query: 997  XGTSPSPFGA-------QSSAFGAQTTXXXXXXXXXXXXXXXXQRGGSRVAAYTPTAEAD 1155
             G S SPFG+       QSSAFG+QT                 QRGGSRVA+YT T EAD
Sbjct: 292  FGNS-SPFGSTASPFGGQSSAFGSQTPTSTFGNTGGQSGFGGQQRGGSRVASYTATTEAD 350

Query: 1156 GGTGTQPAGKLESISAMPVYKDKSHEELRWEDYQLGDKXXXXXXXXXXXXXXXXXN-TQS 1332
             GT  Q A KLESISAMP+YKDKSHEELRWEDYQLGDK                 + T +
Sbjct: 351  SGTSGQTA-KLESISAMPIYKDKSHEELRWEDYQLGDKGGPLPSALSTGLTGFGSSTTPT 409

Query: 1333 NPFSSSSTFGQTSANPFSSTTP-TNPFGQKSAPFSTPXXXXXXXXXXXXXXXXXXNANXX 1509
            N FS S  FGQ+SANPFSSTTP +NPF  KS+PFS+                   +A   
Sbjct: 410  NAFSPSPVFGQSSANPFSSTTPNSNPFAPKSSPFSS---------------GFGTSATPA 454

Query: 1510 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSTSIFGSAPTQGTTSTFNTGLNF 1689
                                               G S S+F +APTQ T+S F   + F
Sbjct: 455  FSSSAFGSSTSAAAPSLFGSTPSPFGANSSSTPSFGQSPSLFNTAPTQATSSPFGNSI-F 513

Query: 1690 GNTQQSPLFQSSTPAIGQSGSAFGQAPS-FGQ-TTPGFGQTNMFNTSSTGFGNMFXXXXX 1863
            GNT  SPLF S+ P  GQ+ SAFGQ  S FGQ TTP F Q ++FN+ S+G          
Sbjct: 514  GNTLSSPLFSSAAPTGGQTASAFGQNTSPFGQTTTPSFSQPSLFNSPSSGLVGSIFSSSA 573

Query: 1864 XXXXXXXMGFGQTMPSQSSPFQLAQPSQNAGA--FGNFGQTQAAGLSGLGGTPGFYGQSN 2037
                    GFGQT  S S+PFQ AQP+Q++GA  FGNFGQTQ  G S  GGTPG +GQ+N
Sbjct: 574  PLTSNNLTGFGQTALSISTPFQSAQPAQSSGAFGFGNFGQTQPVGASSFGGTPGMFGQNN 633

Query: 2038 YG 2043
            +G
Sbjct: 634  FG 635


>ref|XP_003543180.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 2
            [Glycine max]
          Length = 1010

 Score =  533 bits (1373), Expect(2) = 0.0
 Identities = 260/369 (70%), Positives = 301/369 (81%), Gaps = 1/369 (0%)
 Frame = +3

Query: 2145 SSVAQNTAVVQQAPVLNPFGTLPAMPSMSIGRAGTSPSIQYGISSLPVVDKPAPARISSL 2324
            SS  Q++  VQ  P  NPFGTLPA+P MSIGR GT+PSIQYGISS+P +DKPAP RISSL
Sbjct: 641  SSTPQSSVAVQAVPNTNPFGTLPALPQMSIGRVGTTPSIQYGISSMPALDKPAPVRISSL 700

Query: 2325 LTSRHLSQRRVRLPARKYHPKNNGLKVPFFSDDEETPTTPKADTLFIPRENPRALVIRPL 2504
            LTSRHLSQRR+RLP RKYH KN+G KV FFSDDE+TPTTPKAD LFIPRENPRAL+I P+
Sbjct: 701  LTSRHLSQRRIRLPVRKYHSKNDGPKVAFFSDDEDTPTTPKADALFIPRENPRALIICPM 760

Query: 2505 EQWPGRTNGEKRSLSKEHTPIQENDEDIVKNGSTDEQSDHVKSGQKPNGVHDEHFGQKED 2684
            EQWPG+ + +  +      P+ EN E  V+NG   EQ+  + +    NG +++H  QK D
Sbjct: 761  EQWPGKVSEKPSTFKDRSIPVNEN-ESAVENGVVKEQAQPITTKPTSNGSNEDHSLQKAD 819

Query: 2685 AYITLTGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEPRIQELAAKERAEPGFCRRVKD 2864
             Y TL+GHRAGEAAIVYEHGAD+EALMPKLR SDYYT PRI ELAAKERAEPGFC  VKD
Sbjct: 820  VYKTLSGHRAGEAAIVYEHGADVEALMPKLRRSDYYTLPRIHELAAKERAEPGFCSHVKD 879

Query: 2865 FVVGRHGYGNIKFLGETDVRRLDLESLVQFNLREVIVYMDESKKPPVGQGLNKPAVVTLL 3044
            FVVGR GYG+I+FLGETDVRRLDLESL+QFN REVIVYMD+ KKPPVGQGLNKPA VTLL
Sbjct: 880  FVVGRQGYGSIRFLGETDVRRLDLESLIQFNNREVIVYMDDLKKPPVGQGLNKPAEVTLL 939

Query: 3045 NVKCFDKKTNRHYTEGPRIDKYKEMLRKKAEDQGAEFVSYDPIEGEWAFKVSHFSRYEL- 3221
            N+KCFDKKT   YTEGP+I+KYKEML++KAEDQGAEF+SYDP +GEW  +VSHFS Y+L 
Sbjct: 940  NIKCFDKKTGHQYTEGPKIEKYKEMLKRKAEDQGAEFLSYDPTKGEWKIRVSHFSIYKLV 999

Query: 3222 RDEDLGLDD 3248
             DE+  ++D
Sbjct: 1000 EDENSWIND 1008



 Score =  369 bits (946), Expect(2) = 0.0
 Identities = 261/658 (39%), Positives = 309/658 (46%), Gaps = 33/658 (5%)
 Frame = +1

Query: 169  MFGSTNPFGQSSTSPFGTQSAFGQTNSGNSNPFAPNPFGSTTPFGTQTGSSLFGGTATGV 348
            MFGS NPFGQSS+SPFG+QS FGQTNS ++NPFAP PFGST PFG+QTG S+FGGT+TGV
Sbjct: 1    MFGS-NPFGQSSSSPFGSQSVFGQTNSSSNNPFAPKPFGSTAPFGSQTGGSIFGGTSTGV 59

Query: 349  -----------------FGSNQASSPLPSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 477
                             FGS+Q +    STP                             
Sbjct: 60   FGTAQPSSPFGASSSPAFGSSQPAFVSSSTPAFGSSSSSFGGSSVFGQKPAFGGFGSTPT 119

Query: 478  XXXXXXXXXXXQKPSFGG--FGSST---AQTSP-FGSTFQQS---QXXXXXXXXXXXXXX 630
                       Q P+FG   FGSST   A + P FG+T   +                  
Sbjct: 120  QTTPFGAAQPSQ-PAFGSSIFGSSTPFGASSQPAFGATSNPAFGATSTPAFGATSTPAFG 178

Query: 631  XXXXXXXXXXXXXXXXXXXXXXYGATNPPAFGATSSPAFGSVSTPTFGSTGNAFGVSSAP 810
                                  +GAT+ PAFGATS+PAFGS STP FGSTG+AFGVSS P
Sbjct: 179  ATSTPAFGATSTPSFGATSTPAFGATSSPAFGATSAPAFGSTSTPAFGSTGSAFGVSSTP 238

Query: 811  VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 990
            V                                                           
Sbjct: 239  VFGSGGAFGASSNPMFGSSSTSAFGTSSSPFGATSTPAFGASSTPAFSFGSTPQAFGQSS 298

Query: 991  XXXGTSPSPFGAQSSAFG-AQTTXXXXXXXXXXXXXXXXQRGGSRVAAYTPTAEADGGTG 1167
               G S SPFG+ +S FG +QT                 QRGGSRVA+YT T EAD GT 
Sbjct: 299  SAFGNS-SPFGSTASPFGGSQTPTSTFGNTGGQSGFGGQQRGGSRVASYTATTEADSGTS 357

Query: 1168 TQPAGKLESISAMPVYKDKSHEELRWEDYQLGDKXXXXXXXXXXXXXXXXXNT-QSNPFS 1344
             Q A KLESISAMP+YKDKSHEELRWEDYQLGDK                 +T Q+N FS
Sbjct: 358  GQTA-KLESISAMPIYKDKSHEELRWEDYQLGDKGGSLPSTQSTGLTGFGSSTTQTNAFS 416

Query: 1345 SSSTFGQTSANPFSSTTP-TNPFGQKSAPFSTPXXXXXXXXXXXXXXXXXXNANXXXXXX 1521
             S  FGQ+SANPFSST P +NPF QKS+PFS+                   +A       
Sbjct: 417  PSPVFGQSSANPFSSTAPNSNPFAQKSSPFSSGFGTSAAPAFSSSAFGSSTSA------- 469

Query: 1522 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSTSIFGSAPTQGTTSTFNTGLNFGNTQ 1701
                                           G S S+F +AP Q T+S F   + FGNTQ
Sbjct: 470  --------AAPSLFGSSPSPFGANSSSTPGFGQSPSLFNTAPAQATSSPFGNSI-FGNTQ 520

Query: 1702 QSPLFQSSTPAIGQSGSAFGQAPS-FGQTT-PGFGQTNMFNTSSTGFGNMFXXXXXXXXX 1875
             SPLF S+ P  GQ+GSAFGQ  S FGQTT P F Q+++F++ S+G              
Sbjct: 521  SSPLFSSAAPTGGQTGSAFGQNTSPFGQTTTPSFSQSSLFSSPSSGLVGSIFSSSAPLTS 580

Query: 1876 XXXMGFGQTMPSQSSPFQLAQPSQNAGAFG--NFGQTQAAGLSGLGGTPGFYGQSNYG 2043
                GFGQT PS S+PFQ AQP+Q++GAFG  NFGQTQ  G S  GGTPG +GQ+N+G
Sbjct: 581  NNLTGFGQTAPSISTPFQPAQPAQSSGAFGFSNFGQTQPVGASSFGGTPGIFGQNNFG 638


>ref|XP_003543179.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
            [Glycine max]
          Length = 1038

 Score =  525 bits (1351), Expect(2) = 0.0
 Identities = 259/390 (66%), Positives = 302/390 (77%), Gaps = 22/390 (5%)
 Frame = +3

Query: 2145 SSVAQNTAVVQQAPVLNPFGTLPAMPSMSIGRAGTSPSIQYGISSLPVVDKPAPARISSL 2324
            SS  Q++  VQ  P  NPFGTLPA+P MSIGR GT+PSIQYGISS+P +DKPAP RISSL
Sbjct: 647  SSTPQSSVAVQAVPNTNPFGTLPALPQMSIGRVGTTPSIQYGISSMPALDKPAPVRISSL 706

Query: 2325 LTSRHLSQRRVRLPARKYHPKNNGLKVPFFSDDEETPTTPKADTLFIPRENPRALVIRPL 2504
            LTSRHLSQRR+RLP RKYH KN+G KV FFSDDE+TPTTPKAD LFIPRENPRAL+I P+
Sbjct: 707  LTSRHLSQRRIRLPVRKYHSKNDGPKVAFFSDDEDTPTTPKADALFIPRENPRALIICPM 766

Query: 2505 EQWPGRTNGEKRSLSKEHTPIQEN---------------------DEDIVKNGSTDEQSD 2621
            EQWPG+ + +  +      P+ EN                     ++  V+NG   EQ+ 
Sbjct: 767  EQWPGKVSEKPSTFKDRSIPVNENGNISKDASVTPDRTTSQDKDKEKSAVENGVVKEQAQ 826

Query: 2622 HVKSGQKPNGVHDEHFGQKEDAYITLTGHRAGEAAIVYEHGADIEALMPKLRHSDYYTEP 2801
             + +    NG +++H  QK D Y TL+GHRAGEAAIVYEHGAD+EALMPKLR SDYYT P
Sbjct: 827  PITTKPTSNGSNEDHSLQKADVYKTLSGHRAGEAAIVYEHGADVEALMPKLRRSDYYTLP 886

Query: 2802 RIQELAAKERAEPGFCRRVKDFVVGRHGYGNIKFLGETDVRRLDLESLVQFNLREVIVYM 2981
            RI ELAAKERAEPGFC  VKDFVVGR GYG+I+FLGETDVRRLDLESL+QFN REVIVYM
Sbjct: 887  RIHELAAKERAEPGFCSHVKDFVVGRQGYGSIRFLGETDVRRLDLESLIQFNNREVIVYM 946

Query: 2982 DESKKPPVGQGLNKPAVVTLLNVKCFDKKTNRHYTEGPRIDKYKEMLRKKAEDQGAEFVS 3161
            D+ KKPPVGQGLNKPA VTLLN+KCFDKKT   YTEGP+I+KYKEML++KAEDQGAEF+S
Sbjct: 947  DDLKKPPVGQGLNKPAEVTLLNIKCFDKKTGHQYTEGPKIEKYKEMLKRKAEDQGAEFLS 1006

Query: 3162 YDPIEGEWAFKVSHFSRYEL-RDEDLGLDD 3248
            YDP +GEW  +VSHFS Y+L  DE+  ++D
Sbjct: 1007 YDPTKGEWKIRVSHFSIYKLVEDENSWIND 1036



 Score =  372 bits (954), Expect(2) = 0.0
 Identities = 264/664 (39%), Positives = 311/664 (46%), Gaps = 39/664 (5%)
 Frame = +1

Query: 169  MFGSTNPFGQSSTSPFGTQSAFGQTNSGNSNPFAPNPFGSTTPFGTQTGSSLFGGTATGV 348
            MFGS NPFGQSS+SPFG+QS FGQTNS ++NPFAP PFGST PFG+QTG S+FGGT+TGV
Sbjct: 1    MFGS-NPFGQSSSSPFGSQSVFGQTNSSSNNPFAPKPFGSTAPFGSQTGGSIFGGTSTGV 59

Query: 349  -----------------FGSNQASSPLPSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 477
                             FGS+Q +    STP                             
Sbjct: 60   FGTAQPSSPFGASSSPAFGSSQPAFVSSSTPAFGSSSSSFGGSSVFGQKPAFGGFGSTPT 119

Query: 478  XXXXXXXXXXXQKPSFGG--FGSST---AQTSP-FGSTFQQS---QXXXXXXXXXXXXXX 630
                       Q P+FG   FGSST   A + P FG+T   +                  
Sbjct: 120  QTTPFGAAQPSQ-PAFGSSIFGSSTPFGASSQPAFGATSNPAFGATSTPAFGATSTPAFG 178

Query: 631  XXXXXXXXXXXXXXXXXXXXXXYGATNPPAFGATSSPAFGSVSTPTFGSTGNAFGVSSAP 810
                                  +GAT+ PAFGATS+PAFGS STP FGSTG+AFGVSS P
Sbjct: 179  ATSTPAFGATSTPSFGATSTPAFGATSSPAFGATSAPAFGSTSTPAFGSTGSAFGVSSTP 238

Query: 811  VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 990
            V                                                           
Sbjct: 239  VFGSGGAFGASSNPMFGSSSTSAFGTSSSPFGATSTPAFGASSTPAFSFGSTPQAFGQSS 298

Query: 991  XXXGTSPSPFGA-------QSSAFGAQTTXXXXXXXXXXXXXXXXQRGGSRVAAYTPTAE 1149
               G S SPFG+       QSSAFG+QT                 QRGGSRVA+YT T E
Sbjct: 299  SAFGNS-SPFGSTASPFGGQSSAFGSQTPTSTFGNTGGQSGFGGQQRGGSRVASYTATTE 357

Query: 1150 ADGGTGTQPAGKLESISAMPVYKDKSHEELRWEDYQLGDKXXXXXXXXXXXXXXXXXN-T 1326
            AD GT  Q A KLESISAMP+YKDKSHEELRWEDYQLGDK                 + T
Sbjct: 358  ADSGTSGQTA-KLESISAMPIYKDKSHEELRWEDYQLGDKGGSLPSTQSTGLTGFGSSTT 416

Query: 1327 QSNPFSSSSTFGQTSANPFSSTTP-TNPFGQKSAPFSTPXXXXXXXXXXXXXXXXXXNAN 1503
            Q+N FS S  FGQ+SANPFSST P +NPF QKS+PFS+                   +A 
Sbjct: 417  QTNAFSPSPVFGQSSANPFSSTAPNSNPFAQKSSPFSS---------------GFGTSAA 461

Query: 1504 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSTSIFGSAPTQGTTSTFNTGL 1683
                                                 G S S+F +AP Q T+S F   +
Sbjct: 462  PAFSSSAFGSSTSAAAPSLFGSSPSPFGANSSSTPGFGQSPSLFNTAPAQATSSPFGNSI 521

Query: 1684 NFGNTQQSPLFQSSTPAIGQSGSAFGQAPS-FGQ-TTPGFGQTNMFNTSSTGFGNMFXXX 1857
             FGNTQ SPLF S+ P  GQ+GSAFGQ  S FGQ TTP F Q+++F++ S+G        
Sbjct: 522  -FGNTQSSPLFSSAAPTGGQTGSAFGQNTSPFGQTTTPSFSQSSLFSSPSSGLVGSIFSS 580

Query: 1858 XXXXXXXXXMGFGQTMPSQSSPFQLAQPSQNAGAFG--NFGQTQAAGLSGLGGTPGFYGQ 2031
                      GFGQT PS S+PFQ AQP+Q++GAFG  NFGQTQ  G S  GGTPG +GQ
Sbjct: 581  SAPLTSNNLTGFGQTAPSISTPFQPAQPAQSSGAFGFSNFGQTQPVGASSFGGTPGIFGQ 640

Query: 2032 SNYG 2043
            +N+G
Sbjct: 641  NNFG 644


Top