BLASTX nr result

ID: Cnidium21_contig00002257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002257
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262985.1| PREDICTED: bet1-like SNARE 1-1 [Vitis vinife...   214   8e-54
ref|XP_002300787.1| predicted protein [Populus trichocarpa] gi|2...   209   3e-52
ref|XP_002307637.1| predicted protein [Populus trichocarpa] gi|2...   209   3e-52
gb|AFK36257.1| unknown [Medicago truncatula]                          201   7e-50
gb|ACD62528.1| bet1-like snare 1-1 [Malus x domestica]                201   7e-50

>ref|XP_002262985.1| PREDICTED: bet1-like SNARE 1-1 [Vitis vinifera]
           gi|297744115|emb|CBI37085.3| unnamed protein product
           [Vitis vinifera]
          Length = 123

 Score =  214 bits (546), Expect = 8e-54
 Identities = 101/123 (82%), Positives = 118/123 (95%)
 Frame = -2

Query: 548 MSSRRDYRGNRAALFDDVEEGGIRAASSYSSHEIDEHENDRAIEGLSDRVLMLKRLTGDI 369
           M+SRRDYRGNR ALFD +EEGGIRA+SSYSSHEIDEH+N+RA++GL DRV +LKRLTGDI
Sbjct: 1   MNSRRDYRGNRIALFDGIEEGGIRASSSYSSHEIDEHDNERAVDGLQDRVNLLKRLTGDI 60

Query: 368 HEEVDSHNRMLDRMGNDMDSSRGVLSGTMDKFKMVFETKSSRKMLTLVASFVVLFLIVYY 189
           HEEV+SHNRMLDR+GNDMD+SRG+LSGTMD+FKMVFET+SSR+M TLVASFVV+FLI+YY
Sbjct: 61  HEEVESHNRMLDRVGNDMDASRGILSGTMDRFKMVFETRSSRRMFTLVASFVVIFLIIYY 120

Query: 188 LTR 180
           LTR
Sbjct: 121 LTR 123


>ref|XP_002300787.1| predicted protein [Populus trichocarpa] gi|222842513|gb|EEE80060.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score =  209 bits (533), Expect = 3e-52
 Identities = 103/123 (83%), Positives = 116/123 (94%)
 Frame = -2

Query: 548 MSSRRDYRGNRAALFDDVEEGGIRAASSYSSHEIDEHENDRAIEGLSDRVLMLKRLTGDI 369
           M+SRRD R NRAALFD +EEGGIRA+SSYSSHEIDE +N+RA+EGL DRV +LKRL+GDI
Sbjct: 1   MNSRRDVRNNRAALFDGIEEGGIRASSSYSSHEIDEQDNERALEGLEDRVSLLKRLSGDI 60

Query: 368 HEEVDSHNRMLDRMGNDMDSSRGVLSGTMDKFKMVFETKSSRKMLTLVASFVVLFLIVYY 189
           +EEVDSHN MLDRMGNDMDSSRGVLSGTMD+FKMVFETKSSR+MLTLVASFVV+FLI+YY
Sbjct: 61  NEEVDSHNLMLDRMGNDMDSSRGVLSGTMDRFKMVFETKSSRRMLTLVASFVVIFLIIYY 120

Query: 188 LTR 180
           LTR
Sbjct: 121 LTR 123


>ref|XP_002307637.1| predicted protein [Populus trichocarpa] gi|222857086|gb|EEE94633.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score =  209 bits (532), Expect = 3e-52
 Identities = 102/123 (82%), Positives = 116/123 (94%)
 Frame = -2

Query: 548 MSSRRDYRGNRAALFDDVEEGGIRAASSYSSHEIDEHENDRAIEGLSDRVLMLKRLTGDI 369
           M+SRRD R NRAALFD +EEGGIRA+SSYSSHEIDE +N+RA+EGL DRV++LKRL+GDI
Sbjct: 1   MNSRRDIRNNRAALFDGIEEGGIRASSSYSSHEIDEQDNERALEGLQDRVILLKRLSGDI 60

Query: 368 HEEVDSHNRMLDRMGNDMDSSRGVLSGTMDKFKMVFETKSSRKMLTLVASFVVLFLIVYY 189
           +EEVD+HN MLDRMGNDMDSSRGVLSGTMD+FKMVFETKSSR+M TLVASFVVLFLI+YY
Sbjct: 61  NEEVDNHNLMLDRMGNDMDSSRGVLSGTMDRFKMVFETKSSRRMFTLVASFVVLFLIIYY 120

Query: 188 LTR 180
           LTR
Sbjct: 121 LTR 123


>gb|AFK36257.1| unknown [Medicago truncatula]
          Length = 127

 Score =  201 bits (512), Expect = 7e-50
 Identities = 100/126 (79%), Positives = 114/126 (90%), Gaps = 3/126 (2%)
 Frame = -2

Query: 548 MSSRRDYRGNRAALFDDVEEGGIRAASSYSS---HEIDEHENDRAIEGLSDRVLMLKRLT 378
           M+SRRD R NR ALFD +EEGGIRA+S YSS   HEIDEH+N++A++GL DRV +LKRL+
Sbjct: 2   MNSRRDTRNNRVALFDGIEEGGIRASSMYSSGSSHEIDEHDNEQAMDGLQDRVNLLKRLS 61

Query: 377 GDIHEEVDSHNRMLDRMGNDMDSSRGVLSGTMDKFKMVFETKSSRKMLTLVASFVVLFLI 198
           GDIHEEVDSHNRMLD MGNDMDSSRGVLSGTMDKFKMVFETKSSR+M +LVASFVV+FLI
Sbjct: 62  GDIHEEVDSHNRMLDHMGNDMDSSRGVLSGTMDKFKMVFETKSSRRMFSLVASFVVIFLI 121

Query: 197 VYYLTR 180
           +YYLTR
Sbjct: 122 IYYLTR 127


>gb|ACD62528.1| bet1-like snare 1-1 [Malus x domestica]
          Length = 122

 Score =  201 bits (512), Expect = 7e-50
 Identities = 95/123 (77%), Positives = 116/123 (94%)
 Frame = -2

Query: 548 MSSRRDYRGNRAALFDDVEEGGIRAASSYSSHEIDEHENDRAIEGLSDRVLMLKRLTGDI 369
           M++RRD+RGN+ ALFD +EEGGIR+++SYS HEIDEH+N+RA++GL DRV +LKRL+GDI
Sbjct: 1   MNARRDFRGNKVALFDGIEEGGIRSSASYS-HEIDEHDNERAVDGLQDRVNLLKRLSGDI 59

Query: 368 HEEVDSHNRMLDRMGNDMDSSRGVLSGTMDKFKMVFETKSSRKMLTLVASFVVLFLIVYY 189
           HEEV++HN MLDRMGNDMDSSRGVLSGTMDKFKMVFETKSS++M TLVASFVV+FL++YY
Sbjct: 60  HEEVETHNHMLDRMGNDMDSSRGVLSGTMDKFKMVFETKSSQRMFTLVASFVVIFLVIYY 119

Query: 188 LTR 180
           LTR
Sbjct: 120 LTR 122


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