BLASTX nr result

ID: Cnidium21_contig00002241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002241
         (1081 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284876.1| PREDICTED: transmembrane protein 19 [Vitis v...   355   1e-95
ref|XP_004149856.1| PREDICTED: transmembrane protein 19-like [Cu...   352   1e-94
ref|XP_002324403.1| predicted protein [Populus trichocarpa] gi|2...   350   5e-94
ref|NP_568386.1| uncharacterized protein [Arabidopsis thaliana] ...   343   4e-92
gb|AAM61603.1| unknown [Arabidopsis thaliana]                         341   2e-91

>ref|XP_002284876.1| PREDICTED: transmembrane protein 19 [Vitis vinifera]
           gi|297738884|emb|CBI28129.3| unnamed protein product
           [Vitis vinifera]
          Length = 287

 Score =  355 bits (910), Expect = 1e-95
 Identities = 169/234 (72%), Positives = 200/234 (85%)
 Frame = -2

Query: 969 DLSGAFMGFVVMTIHFAVNYRFGAMLLVFFFTSSKLTKFGDEKKRKIDPEYKEGGQRNWL 790
           DLSGAF GF V+TIHF V YR+GAMLL FF TSSKLTKFG+EKKR +D ++KEGGQRNW 
Sbjct: 29  DLSGAFAGFAVLTIHFGVGYRYGAMLLAFFLTSSKLTKFGEEKKRLVDADFKEGGQRNWK 88

Query: 789 QVLSNAGIASLLVILFWLMSGSEDKCLDSTESKFATALIGSIIGHYSCSNGDTWSSELGI 610
           QVL N+GI+++L ++ W ++G +DKCLDS ES   T+LIG IIGHYSC NGDTWSSELGI
Sbjct: 89  QVLFNSGISAVLALILWRLTGWQDKCLDSKESSLITSLIGGIIGHYSCCNGDTWSSELGI 148

Query: 609 LSDAQPRLITTFKPVRRGTNGGVTKAGLIXXXXAGSIVGLTFVLMGFFTTNCMFNKSLNQ 430
           LSD+QPRLITTFKPVR+GTNGGVTK GL+    AG ++GLTFVL+GFFTT C  + +L Q
Sbjct: 149 LSDSQPRLITTFKPVRKGTNGGVTKTGLLAATAAGGVIGLTFVLIGFFTTKCASDVALKQ 208

Query: 429 LLVIPLSTLAGLSGSVIDSLLGATLQFTGFCSVRNKIVGKPGPTVKKISGLKIL 268
           LLVIPLS +AGL GS+IDSLLGATLQ++GFCSVRNK+VGKPGPTV+KISG+ IL
Sbjct: 209 LLVIPLSAVAGLCGSLIDSLLGATLQYSGFCSVRNKVVGKPGPTVRKISGISIL 262


>ref|XP_004149856.1| PREDICTED: transmembrane protein 19-like [Cucumis sativus]
            gi|449508273|ref|XP_004163269.1| PREDICTED: transmembrane
            protein 19-like [Cucumis sativus]
          Length = 287

 Score =  352 bits (902), Expect = 1e-94
 Identities = 170/262 (64%), Positives = 208/262 (79%)
 Frame = -2

Query: 1053 MENPMKQPXXXXXXXXXXXXXXXXXXXLDLSGAFMGFVVMTIHFAVNYRFGAMLLVFFFT 874
            M+N + QP                   L+LSGA  GF+VM+ HFA+NYR+GA+LLVFFFT
Sbjct: 1    MDNILIQPSVAVIIASIIAFRAYRRKSLNLSGALAGFIVMSTHFAINYRYGAVLLVFFFT 60

Query: 873  SSKLTKFGDEKKRKIDPEYKEGGQRNWLQVLSNAGIASLLVILFWLMSGSEDKCLDSTES 694
            SSKLTK G+EKKR +D ++KEGGQRNW+QV+ N+GIA++L ++ W ++G +DKCLDS +S
Sbjct: 61   SSKLTKVGEEKKRVVDADFKEGGQRNWIQVVFNSGIATVLAVIIWKITGGQDKCLDSKDS 120

Query: 693  KFATALIGSIIGHYSCSNGDTWSSELGILSDAQPRLITTFKPVRRGTNGGVTKAGLIXXX 514
               TALIG I+GHYSC NGDTWSSELGILSDA PRLIT FKPVR+GTNG VT AGL+   
Sbjct: 121  ALVTALIGGILGHYSCCNGDTWSSELGILSDATPRLITNFKPVRKGTNGAVTNAGLLAAT 180

Query: 513  XAGSIVGLTFVLMGFFTTNCMFNKSLNQLLVIPLSTLAGLSGSVIDSLLGATLQFTGFCS 334
             AG+++GLTFVL+GFFTT C +  +L QLLVIPL+ +AGL GSVIDSLLGAT+QF+GFC+
Sbjct: 181  AAGAVIGLTFVLLGFFTTKCDYGTTLKQLLVIPLAAVAGLCGSVIDSLLGATVQFSGFCT 240

Query: 333  VRNKIVGKPGPTVKKISGLKIL 268
            VRNK+VGKPGPTVKKISGL IL
Sbjct: 241  VRNKVVGKPGPTVKKISGLNIL 262


>ref|XP_002324403.1| predicted protein [Populus trichocarpa] gi|222865837|gb|EEF02968.1|
            predicted protein [Populus trichocarpa]
          Length = 287

 Score =  350 bits (897), Expect = 5e-94
 Identities = 173/262 (66%), Positives = 209/262 (79%)
 Frame = -2

Query: 1053 MENPMKQPXXXXXXXXXXXXXXXXXXXLDLSGAFMGFVVMTIHFAVNYRFGAMLLVFFFT 874
            MEN + QP                   LD++GA  GF+VMT+HFA++YRFGA+LLVFFF+
Sbjct: 1    MENVVIQPSVAVLISFVIAIKAYRRKSLDVTGAVAGFIVMTLHFAISYRFGAILLVFFFS 60

Query: 873  SSKLTKFGDEKKRKIDPEYKEGGQRNWLQVLSNAGIASLLVILFWLMSGSEDKCLDSTES 694
            SSKLTK G++KKR+ D E+KEGGQRNW+QVL+N+GIAS+LV+    ++G EDKCLD  ES
Sbjct: 61   SSKLTKVGEDKKRRFDAEFKEGGQRNWIQVLANSGIASVLVLAVGRLAGWEDKCLDGKES 120

Query: 693  KFATALIGSIIGHYSCSNGDTWSSELGILSDAQPRLITTFKPVRRGTNGGVTKAGLIXXX 514
               T+LIG IIG YSC NGDTWSSELG+LSDAQPRLITTFKPVRRG NGGVT AGL+   
Sbjct: 121  AVITSLIGGIIGQYSCCNGDTWSSELGVLSDAQPRLITTFKPVRRGANGGVTLAGLLAAA 180

Query: 513  XAGSIVGLTFVLMGFFTTNCMFNKSLNQLLVIPLSTLAGLSGSVIDSLLGATLQFTGFCS 334
             AG ++GL FVL+GFFTT C+F+ +L QLLVIP++ LAGL GS+IDSLLGATLQF+GFC+
Sbjct: 181  AAGGVIGLAFVLIGFFTTKCVFDVALKQLLVIPVAALAGLCGSLIDSLLGATLQFSGFCT 240

Query: 333  VRNKIVGKPGPTVKKISGLKIL 268
            VRNK+VGKPGPTV+KISGL IL
Sbjct: 241  VRNKVVGKPGPTVRKISGLDIL 262


>ref|NP_568386.1| uncharacterized protein [Arabidopsis thaliana]
           gi|334187781|ref|NP_001190343.1| uncharacterized protein
           [Arabidopsis thaliana] gi|110738248|dbj|BAF01053.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332005384|gb|AED92767.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332005385|gb|AED92768.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 288

 Score =  343 bits (880), Expect = 4e-92
 Identities = 164/234 (70%), Positives = 200/234 (85%)
 Frame = -2

Query: 969 DLSGAFMGFVVMTIHFAVNYRFGAMLLVFFFTSSKLTKFGDEKKRKIDPEYKEGGQRNWL 790
           DLSG   GF+VMTIHF   +R+GA+LLVFF TSSKLTK G++KKR++D E+KEGGQRNW+
Sbjct: 30  DLSGGIAGFLVMTIHFTAGFRYGALLLVFFLTSSKLTKVGEDKKRRVDVEFKEGGQRNWV 89

Query: 789 QVLSNAGIASLLVILFWLMSGSEDKCLDSTESKFATALIGSIIGHYSCSNGDTWSSELGI 610
           QVL N+GIAS+LV++   ++G +DKCLDS +S+  TALIG IIGHY+C NGDTWSSELG+
Sbjct: 90  QVLCNSGIASVLVVIACTLTGWKDKCLDSKQSEIVTALIGGIIGHYACCNGDTWSSELGV 149

Query: 609 LSDAQPRLITTFKPVRRGTNGGVTKAGLIXXXXAGSIVGLTFVLMGFFTTNCMFNKSLNQ 430
           LSDAQPRLITTFKPV++GTNGGVTKAGL+    AG+ VGLTF++ G FT +C  + +L Q
Sbjct: 150 LSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAAGTTVGLTFLIFGLFTASCASDVALKQ 209

Query: 429 LLVIPLSTLAGLSGSVIDSLLGATLQFTGFCSVRNKIVGKPGPTVKKISGLKIL 268
           LLVIPLS LAGL GS+IDS+LGAT+QF+GFCSVRNK+VGKPGPTVKKISG+ IL
Sbjct: 210 LLVIPLSALAGLCGSLIDSILGATIQFSGFCSVRNKVVGKPGPTVKKISGVDIL 263


>gb|AAM61603.1| unknown [Arabidopsis thaliana]
          Length = 288

 Score =  341 bits (874), Expect = 2e-91
 Identities = 163/234 (69%), Positives = 199/234 (85%)
 Frame = -2

Query: 969 DLSGAFMGFVVMTIHFAVNYRFGAMLLVFFFTSSKLTKFGDEKKRKIDPEYKEGGQRNWL 790
           DLSG   GF+VMTIHF   +R+GA+LLVFF TSSKLTK G++KKR++D E+KEGGQRNW+
Sbjct: 30  DLSGGIAGFLVMTIHFTAGFRYGALLLVFFLTSSKLTKVGEDKKRRVDVEFKEGGQRNWV 89

Query: 789 QVLSNAGIASLLVILFWLMSGSEDKCLDSTESKFATALIGSIIGHYSCSNGDTWSSELGI 610
           QVL N+GIAS+LV++   ++G +DKCLDS +S+  TALIG IIGHY+C NGDTWSSELG+
Sbjct: 90  QVLCNSGIASVLVVIACTLTGWKDKCLDSKQSEIVTALIGGIIGHYACCNGDTWSSELGV 149

Query: 609 LSDAQPRLITTFKPVRRGTNGGVTKAGLIXXXXAGSIVGLTFVLMGFFTTNCMFNKSLNQ 430
           LSDAQPRLITTFKPV++GTNGGVTKAGL+    AG+ VGLTF++ G FT +C  + +L Q
Sbjct: 150 LSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAAGTTVGLTFLIFGLFTASCASDVALKQ 209

Query: 429 LLVIPLSTLAGLSGSVIDSLLGATLQFTGFCSVRNKIVGKPGPTVKKISGLKIL 268
           LLVIPL  LAGL GS+IDS+LGAT+QF+GFCSVRNK+VGKPGPTVKKISG+ IL
Sbjct: 210 LLVIPLFALAGLCGSLIDSILGATIQFSGFCSVRNKVVGKPGPTVKKISGVDIL 263


Top