BLASTX nr result

ID: Cnidium21_contig00002232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002232
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328735.1| predicted protein [Populus trichocarpa] gi|2...   126   4e-27
ref|XP_003633414.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   122   5e-26
emb|CAN60615.1| hypothetical protein VITISV_003254 [Vitis vinifera]   122   5e-26
ref|XP_003564800.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   120   3e-25
ref|XP_004133736.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   119   6e-25

>ref|XP_002328735.1| predicted protein [Populus trichocarpa] gi|222839033|gb|EEE77384.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score =  126 bits (316), Expect = 4e-27
 Identities = 65/107 (60%), Positives = 76/107 (71%), Gaps = 1/107 (0%)
 Frame = -3

Query: 632 VITYNPSKGNIYALFKDQAKPDDILKATFHANVLLHIIXXXXXXXXXXXXXXS-DPSVLL 456
           ++TYNPSK  +YAL KDQAKPDDI+KA FHA+VL+H I                  S  +
Sbjct: 288 IVTYNPSKDKVYALLKDQAKPDDIVKAAFHAHVLMHFIHSSNNNCSSPSKQQEYGHSNFI 347

Query: 455 PSSTNLEAHIADSYKMVSALYAPFKSKAKEQGWVMSESHLNPGRARL 315
            S+ +LE+HIA+S KMVS LYAPFKSKA EQGW MSESHLNPGRARL
Sbjct: 348 LSAADLESHIAESCKMVSTLYAPFKSKAAEQGWRMSESHLNPGRARL 394


>ref|XP_003633414.1| PREDICTED: UPF0420 protein C16orf58 homolog [Vitis vinifera]
           gi|297739449|emb|CBI29631.3| unnamed protein product
           [Vitis vinifera]
          Length = 504

 Score =  122 bits (306), Expect = 5e-26
 Identities = 64/107 (59%), Positives = 75/107 (70%), Gaps = 1/107 (0%)
 Frame = -3

Query: 632 VITYNPSKGNIYALFKDQAKPDDILKATFHANVLLH-IIXXXXXXXXXXXXXXSDPSVLL 456
           ++TYNPSKG +YAL KDQAK DDILKA FHA++LLH I+               D + L+
Sbjct: 394 LVTYNPSKGKVYALLKDQAKSDDILKAAFHAHMLLHFIVSSNGSESFPTKQQDYDSTHLM 453

Query: 455 PSSTNLEAHIADSYKMVSALYAPFKSKAKEQGWVMSESHLNPGRARL 315
           PS+ +L AHIA+S KMVS  Y  FKSKA EQGW MSES LNPGRARL
Sbjct: 454 PSTADLAAHIAESCKMVSTSYGLFKSKAAEQGWTMSESLLNPGRARL 500


>emb|CAN60615.1| hypothetical protein VITISV_003254 [Vitis vinifera]
          Length = 470

 Score =  122 bits (306), Expect = 5e-26
 Identities = 64/107 (59%), Positives = 75/107 (70%), Gaps = 1/107 (0%)
 Frame = -3

Query: 632 VITYNPSKGNIYALFKDQAKPDDILKATFHANVLLH-IIXXXXXXXXXXXXXXSDPSVLL 456
           ++TYNPSKG +YAL KDQAK DDILKA FHA++LLH I+               D + L+
Sbjct: 360 LVTYNPSKGKVYALLKDQAKSDDILKAAFHAHMLLHFIVSSNGSESFPTKQQDYDSTHLM 419

Query: 455 PSSTNLEAHIADSYKMVSALYAPFKSKAKEQGWVMSESHLNPGRARL 315
           PS+ +L AHIA+S KMVS  Y  FKSKA EQGW MSES LNPGRARL
Sbjct: 420 PSTADLAAHIAESCKMVSTSYGLFKSKAAEQGWTMSESLLNPGRARL 466


>ref|XP_003564800.1| PREDICTED: UPF0420 protein C16orf58 homolog [Brachypodium
           distachyon]
          Length = 506

 Score =  120 bits (300), Expect = 3e-25
 Identities = 59/107 (55%), Positives = 73/107 (68%)
 Frame = -3

Query: 632 VITYNPSKGNIYALFKDQAKPDDILKATFHANVLLHIIXXXXXXXXXXXXXXSDPSVLLP 453
           ++TYNP+K  +YAL KDQAKPDD+LKA FHA+VLLH I                 + L P
Sbjct: 395 MVTYNPTKDKVYALLKDQAKPDDVLKAAFHAHVLLHFINASHARKRMNTNRSDHYANLHP 454

Query: 452 SSTNLEAHIADSYKMVSALYAPFKSKAKEQGWVMSESHLNPGRARLC 312
            + +  AHIA+S K+VSA Y  FK KA+EQGW+MSES LNPG+ARLC
Sbjct: 455 RNMDFLAHIAESCKLVSASYGTFKKKAREQGWIMSESLLNPGKARLC 501


>ref|XP_004133736.1| PREDICTED: UPF0420 protein C16orf58 homolog [Cucumis sativus]
           gi|449478104|ref|XP_004155224.1| PREDICTED: UPF0420
           protein C16orf58 homolog [Cucumis sativus]
          Length = 507

 Score =  119 bits (297), Expect = 6e-25
 Identities = 62/107 (57%), Positives = 73/107 (68%)
 Frame = -3

Query: 632 VITYNPSKGNIYALFKDQAKPDDILKATFHANVLLHIIXXXXXXXXXXXXXXSDPSVLLP 453
           ++TYN +KG +YAL KDQAK DDI+KA FHA+VLLH I                 S  +P
Sbjct: 399 LVTYNQTKGKVYALLKDQAKSDDIIKAAFHAHVLLHFIRSSSGAQNSNQKQVDAFSSSVP 458

Query: 452 SSTNLEAHIADSYKMVSALYAPFKSKAKEQGWVMSESHLNPGRARLC 312
           ++TNLEA IA S KMVS  Y  FKSKA EQGWVM+ES LNPG+ARLC
Sbjct: 459 TTTNLEAEIAASCKMVSNSYEIFKSKASEQGWVMAESLLNPGKARLC 505


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