BLASTX nr result

ID: Cnidium21_contig00002202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002202
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297652.1| predicted protein [Populus trichocarpa] gi|2...   234   1e-59
gb|AFK40782.1| unknown [Lotus japonicus]                              223   1e-56
ref|XP_002531639.1| conserved hypothetical protein [Ricinus comm...   223   2e-56
emb|CBI16475.3| unnamed protein product [Vitis vinifera]              221   9e-56
ref|XP_002285666.1| PREDICTED: uncharacterized protein LOC100241...   221   9e-56

>ref|XP_002297652.1| predicted protein [Populus trichocarpa] gi|222844910|gb|EEE82457.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  234 bits (596), Expect = 1e-59
 Identities = 104/123 (84%), Positives = 115/123 (93%)
 Frame = +3

Query: 3   SRRLCLTCLCSTFALISTSAVSISVPKAIALEGKEKPVCRNCGGLGAIICDMCGGTGKWK 182
           SRR CL+CLCST  LI TSA SIS+PKAIA++GKE+PVCRNC G GA++CDMCGGTGKWK
Sbjct: 71  SRRQCLSCLCSTLVLIGTSATSISIPKAIAMDGKERPVCRNCLGSGAVLCDMCGGTGKWK 130

Query: 183 ALNRKRAKDVYEYTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDAKELLDKMYNGRLL 362
           ALNRKRAKDVYE+TECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDA++LLDKMYNGR+L
Sbjct: 131 ALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRIL 190

Query: 363 PNS 371
           P S
Sbjct: 191 PGS 193


>gb|AFK40782.1| unknown [Lotus japonicus]
          Length = 167

 Score =  223 bits (569), Expect = 1e-56
 Identities = 100/123 (81%), Positives = 111/123 (90%)
 Frame = +3

Query: 3   SRRLCLTCLCSTFALISTSAVSISVPKAIALEGKEKPVCRNCGGLGAIICDMCGGTGKWK 182
           SRR CLTCLCST ALI   A  +SVP+A A +G E+P CRNCGG GA++CDMCGGTGKWK
Sbjct: 45  SRRQCLTCLCSTLALIGDYARPVSVPEAAAADGMERPGCRNCGGSGAVLCDMCGGTGKWK 104

Query: 183 ALNRKRAKDVYEYTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDAKELLDKMYNGRLL 362
           ALNRKRAKDVYE+TECPNCYGRGKLVCPVCLGTG+PNNKGLLRRPDA++LLDKMYNG+LL
Sbjct: 105 ALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGVPNNKGLLRRPDAQKLLDKMYNGKLL 164

Query: 363 PNS 371
           PNS
Sbjct: 165 PNS 167


>ref|XP_002531639.1| conserved hypothetical protein [Ricinus communis]
           gi|223528724|gb|EEF30735.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 189

 Score =  223 bits (568), Expect = 2e-56
 Identities = 99/123 (80%), Positives = 110/123 (89%)
 Frame = +3

Query: 3   SRRLCLTCLCSTFALISTSAVSISVPKAIALEGKEKPVCRNCGGLGAIICDMCGGTGKWK 182
           SRR C+ CLCST  LI+    S+ +PKAIAL+GKE+ VCRNC G GA++CDMCGGTGKWK
Sbjct: 67  SRRWCVACLCSTMTLITNGGNSMFIPKAIALDGKERAVCRNCAGSGAVLCDMCGGTGKWK 126

Query: 183 ALNRKRAKDVYEYTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDAKELLDKMYNGRLL 362
           ALNRKRAKDVYE+TECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDA++LLDKMYNGRLL
Sbjct: 127 ALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLL 186

Query: 363 PNS 371
           P S
Sbjct: 187 PRS 189


>emb|CBI16475.3| unnamed protein product [Vitis vinifera]
          Length = 240

 Score =  221 bits (562), Expect = 9e-56
 Identities = 100/123 (81%), Positives = 110/123 (89%)
 Frame = +3

Query: 3   SRRLCLTCLCSTFALISTSAVSISVPKAIALEGKEKPVCRNCGGLGAIICDMCGGTGKWK 182
           SRR CLTCLC+T  LI+TS  S ++  A  ++ KEKPVCRNCGG G I+CDMCGGTGKWK
Sbjct: 120 SRRSCLTCLCTTMVLINTSGSSATIQNA--MDAKEKPVCRNCGGSGVILCDMCGGTGKWK 177

Query: 183 ALNRKRAKDVYEYTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDAKELLDKMYNGRLL 362
           ALNRKRAKDVYE+TECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDA++LLDKMYNGRLL
Sbjct: 178 ALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLL 237

Query: 363 PNS 371
           PNS
Sbjct: 238 PNS 240


>ref|XP_002285666.1| PREDICTED: uncharacterized protein LOC100241679 [Vitis vinifera]
          Length = 183

 Score =  221 bits (562), Expect = 9e-56
 Identities = 100/123 (81%), Positives = 110/123 (89%)
 Frame = +3

Query: 3   SRRLCLTCLCSTFALISTSAVSISVPKAIALEGKEKPVCRNCGGLGAIICDMCGGTGKWK 182
           SRR CLTCLC+T  LI+TS  S ++  A  ++ KEKPVCRNCGG G I+CDMCGGTGKWK
Sbjct: 63  SRRSCLTCLCTTMVLINTSGSSATIQNA--MDAKEKPVCRNCGGSGVILCDMCGGTGKWK 120

Query: 183 ALNRKRAKDVYEYTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDAKELLDKMYNGRLL 362
           ALNRKRAKDVYE+TECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDA++LLDKMYNGRLL
Sbjct: 121 ALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLL 180

Query: 363 PNS 371
           PNS
Sbjct: 181 PNS 183


Top