BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002174
         (1125 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotia...   414   e-113
ref|XP_002303160.1| light-harvesting complex II protein Lhcb6 [P...   411   e-112
gb|AFK41475.1| unknown [Lotus japonicus]                              411   e-112
gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr...   409   e-112
sp|P27524.1|CB4A_SOLLC RecName: Full=Chlorophyll a-b binding pro...   408   e-111

>gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotiana tabacum]
          Length = 257

 Score =  414 bits (1065), Expect = e-113
 Identities = 192/207 (92%), Positives = 203/207 (98%)
 Frame = +3

Query: 267 APKKSWIPAVKGGGNLLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA 446
           APKKSWIPAVKGGGNLLDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMA
Sbjct: 51  APKKSWIPAVKGGGNLLDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMA 110

Query: 447 AVLGIFVGQAYSGIPWFEAGADPGAVAPFSFGTLLGTQLILMGWVESKRWVDFFNPESQS 626
           AVLGIFVGQA+SGIPWFEAGADPGA+APFSFG+LLGTQL+LMGWVESKRWVDFFNPESQS
Sbjct: 111 AVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQS 170

Query: 627 VEWATPWSKTAENFSNFTGEQGYPGGKFFDPLGFAGTIQNGVYIPDEDKLDRLKLAEIKH 806
           VEWATPWSKTAENF+NFTGEQGYPGGKFFDPL  AGT+Q+GVYIPD +KL+RLK+AEIKH
Sbjct: 171 VEWATPWSKTAENFANFTGEQGYPGGKFFDPLSLAGTLQDGVYIPDTEKLERLKVAEIKH 230

Query: 807 ARLAMLAMLIFYFEAGQGKTPLGALAL 887
           ARLAMLAMLIFYFEAGQGKTPLGAL L
Sbjct: 231 ARLAMLAMLIFYFEAGQGKTPLGALGL 257


>ref|XP_002303160.1| light-harvesting complex II protein Lhcb6 [Populus trichocarpa]
           gi|118487218|gb|ABK95437.1| unknown [Populus
           trichocarpa] gi|118489807|gb|ABK96703.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|222840592|gb|EEE78139.1| light-harvesting complex II
           protein Lhcb6 [Populus trichocarpa]
          Length = 257

 Score =  411 bits (1057), Expect = e-112
 Identities = 189/206 (91%), Positives = 203/206 (98%)
 Frame = +3

Query: 270 PKKSWIPAVKGGGNLLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 449
           PKKSWIPAVKGGG+ +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAA
Sbjct: 52  PKKSWIPAVKGGGSFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAA 111

Query: 450 VLGIFVGQAYSGIPWFEAGADPGAVAPFSFGTLLGTQLILMGWVESKRWVDFFNPESQSV 629
           V+GIFVGQA+SGIPWFEAGADPGA+APFSFG+LLGTQLILMGWVESKRWVDFFNPESQSV
Sbjct: 112 VVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPESQSV 171

Query: 630 EWATPWSKTAENFSNFTGEQGYPGGKFFDPLGFAGTIQNGVYIPDEDKLDRLKLAEIKHA 809
           EWATPWSKTAENF+N TG+QGYPGGKFFDPLGFAGT++NGVYIPDE+KL+RLKLAEIKHA
Sbjct: 172 EWATPWSKTAENFANATGDQGYPGGKFFDPLGFAGTLKNGVYIPDEEKLERLKLAEIKHA 231

Query: 810 RLAMLAMLIFYFEAGQGKTPLGALAL 887
           RLAM+AMLIFYFEAGQGKTPLGAL L
Sbjct: 232 RLAMIAMLIFYFEAGQGKTPLGALGL 257


>gb|AFK41475.1| unknown [Lotus japonicus]
          Length = 260

 Score =  411 bits (1056), Expect = e-112
 Identities = 189/207 (91%), Positives = 203/207 (98%)
 Frame = +3

Query: 267 APKKSWIPAVKGGGNLLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA 446
           APKKSWIPAVKGGGNL+DPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA
Sbjct: 54  APKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA 113

Query: 447 AVLGIFVGQAYSGIPWFEAGADPGAVAPFSFGTLLGTQLILMGWVESKRWVDFFNPESQS 626
           AVLGIFVGQA+SG+PWFEAGADP A+APFSFG+LLGTQLILMGWVESKRWVDFFNP+SQS
Sbjct: 114 AVLGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPDSQS 173

Query: 627 VEWATPWSKTAENFSNFTGEQGYPGGKFFDPLGFAGTIQNGVYIPDEDKLDRLKLAEIKH 806
           VEWATPWSKTAENF+N+TG+QGYPGGKFFDPL  AGT+Q+GVYIPD++KL+RLKLAEIKH
Sbjct: 174 VEWATPWSKTAENFANYTGDQGYPGGKFFDPLALAGTLQDGVYIPDKEKLERLKLAEIKH 233

Query: 807 ARLAMLAMLIFYFEAGQGKTPLGALAL 887
           ARLAMLAMLIFYFEAGQGKTPLGAL L
Sbjct: 234 ARLAMLAMLIFYFEAGQGKTPLGALGL 260


>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
          Length = 258

 Score =  409 bits (1051), Expect = e-112
 Identities = 188/207 (90%), Positives = 202/207 (97%)
 Frame = +3

Query: 267 APKKSWIPAVKGGGNLLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA 446
           APKKSWIP V+GGGNL+DPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA
Sbjct: 52  APKKSWIPGVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA 111

Query: 447 AVLGIFVGQAYSGIPWFEAGADPGAVAPFSFGTLLGTQLILMGWVESKRWVDFFNPESQS 626
           AVLGIFVGQA+SG+PWFEAGADP A+APFSFG+LLGTQLILMGWVESKRWVDFFNP+SQS
Sbjct: 112 AVLGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPDSQS 171

Query: 627 VEWATPWSKTAENFSNFTGEQGYPGGKFFDPLGFAGTIQNGVYIPDEDKLDRLKLAEIKH 806
           VEWATPWSKTAENF+N TGEQGYPGGKFFDPLGFAGT+++GVYIPD +KL+RLKLAEIKH
Sbjct: 172 VEWATPWSKTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKH 231

Query: 807 ARLAMLAMLIFYFEAGQGKTPLGALAL 887
           AR+AMLAMLIFYFEAGQGKTPLGAL L
Sbjct: 232 ARIAMLAMLIFYFEAGQGKTPLGALGL 258


>sp|P27524.1|CB4A_SOLLC RecName: Full=Chlorophyll a-b binding protein CP24 10A,
           chloroplastic; Short=CAB-10A; Short=LHCP; Flags:
           Precursor gi|170394|gb|AAA34143.1| a-binding protein
           [Solanum lycopersicum]
          Length = 256

 Score =  408 bits (1048), Expect = e-111
 Identities = 188/207 (90%), Positives = 201/207 (97%)
 Frame = +3

Query: 267 APKKSWIPAVKGGGNLLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA 446
           A KKSWIPAV+GGGNL+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMA
Sbjct: 50  AAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMA 109

Query: 447 AVLGIFVGQAYSGIPWFEAGADPGAVAPFSFGTLLGTQLILMGWVESKRWVDFFNPESQS 626
           AVLGIFVGQA+SGIPWFEAGADPGA+APFSFGTLLGTQLILMGWVESKRWVDFF+P+SQS
Sbjct: 110 AVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQS 169

Query: 627 VEWATPWSKTAENFSNFTGEQGYPGGKFFDPLGFAGTIQNGVYIPDEDKLDRLKLAEIKH 806
           VEWATPWSKTAENF+NFTGEQGYPGGKFFDPL  AGT+ NGVY+PD +KL+RLK+AEIKH
Sbjct: 170 VEWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKH 229

Query: 807 ARLAMLAMLIFYFEAGQGKTPLGALAL 887
           ARLAMLAMLIFYFEAGQGKTPLGAL L
Sbjct: 230 ARLAMLAMLIFYFEAGQGKTPLGALGL 256