BLASTX nr result

ID: Cnidium21_contig00002167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002167
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9FT36.1|TBA_DAUCA RecName: Full=Tubulin alpha chain gi|99659...   161   5e-38
gb|AGG37287.1| alpha-tubulin 5 [Salix arbutifolia]                    158   5e-37
emb|CAE52514.1| alpha tubulin [Setaria viridis]                       158   6e-37
ref|XP_002285563.1| PREDICTED: tubulin alpha-2 chain [Vitis vini...   157   8e-37
gb|AGG37285.1| alpha-tubulin 3 [Salix arbutifolia]                    157   1e-36

>sp|Q9FT36.1|TBA_DAUCA RecName: Full=Tubulin alpha chain gi|9965991|gb|AAG02564.1|
           alpha-tubulin [Daucus carota]
          Length = 451

 Score =  161 bits (408), Expect = 5e-38
 Identities = 76/76 (100%), Positives = 76/76 (100%)
 Frame = -3

Query: 548 TIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDT 369
           TIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDT
Sbjct: 334 TIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDT 393

Query: 368 KFDLMYSKRAFVHWYV 321
           KFDLMYSKRAFVHWYV
Sbjct: 394 KFDLMYSKRAFVHWYV 409


>gb|AGG37287.1| alpha-tubulin 5 [Salix arbutifolia]
          Length = 451

 Score =  158 bits (400), Expect = 5e-37
 Identities = 74/76 (97%), Positives = 75/76 (98%)
 Frame = -3

Query: 548 TIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDT 369
           TIKTKRTIQFVDWCPTGFKCGINYQ PTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDT
Sbjct: 334 TIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDT 393

Query: 368 KFDLMYSKRAFVHWYV 321
           KFDLMY+KRAFVHWYV
Sbjct: 394 KFDLMYAKRAFVHWYV 409


>emb|CAE52514.1| alpha tubulin [Setaria viridis]
          Length = 450

 Score =  158 bits (399), Expect = 6e-37
 Identities = 74/76 (97%), Positives = 75/76 (98%)
 Frame = -3

Query: 548 TIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDT 369
           TIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRID 
Sbjct: 334 TIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDR 393

Query: 368 KFDLMYSKRAFVHWYV 321
           KFDLMY+KRAFVHWYV
Sbjct: 394 KFDLMYAKRAFVHWYV 409


>ref|XP_002285563.1| PREDICTED: tubulin alpha-2 chain [Vitis vinifera]
           gi|147802483|emb|CAN77412.1| hypothetical protein
           VITISV_000470 [Vitis vinifera]
          Length = 451

 Score =  157 bits (398), Expect = 8e-37
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = -3

Query: 548 TIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDT 369
           TIKTKRTIQFVDWCPTGFKCGINYQ PTVVPGGDLAKVQRAVCMISNSTSVAEVFSRID 
Sbjct: 334 TIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDN 393

Query: 368 KFDLMYSKRAFVHWYV 321
           KFDLMYSKRAFVHWYV
Sbjct: 394 KFDLMYSKRAFVHWYV 409


>gb|AGG37285.1| alpha-tubulin 3 [Salix arbutifolia]
          Length = 451

 Score =  157 bits (396), Expect = 1e-36
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = -3

Query: 548 TIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDT 369
           TIKTKRTIQFVDWCPTGFKCGINYQ PTVVPGGDLAKVQRAVCMISNSTSVAEVFSRID 
Sbjct: 334 TIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDH 393

Query: 368 KFDLMYSKRAFVHWYV 321
           KFDLMYSKRAFVHWYV
Sbjct: 394 KFDLMYSKRAFVHWYV 409


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