BLASTX nr result
ID: Cnidium21_contig00002160
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00002160
(1883 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|2... 520 e-145
emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera] 511 e-142
ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein lig... 511 e-142
ref|XP_003601869.1| RCC1 domain-containing protein [Medicago tru... 502 e-139
ref|XP_002515036.1| RCC1 and BTB domain-containing protein, puta... 494 e-137
>ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|222868979|gb|EEF06110.1|
predicted protein [Populus trichocarpa]
Length = 538
Score = 520 bits (1339), Expect = e-145
Identities = 266/391 (68%), Positives = 292/391 (74%)
Frame = +3
Query: 456 MDATTSGTDTFQYRKISDQSVNALVTSSPRSFQRQQRHCFGDAIPGEFPLSANPSIVLHV 635
MD+TTSGT T QY I+DQ V A+V ++QR QRHCFGD+IPGEFPL+ANPSIVLHV
Sbjct: 1 MDSTTSGTPTIQYHNITDQPVTAIVAVPVSTYQRNQRHCFGDSIPGEFPLAANPSIVLHV 60
Query: 636 LTGCNLDPQDLAKLEARTLFLFNQVLDLFLVD*N**CC*LDLNIVLQATCSFFRQPADFA 815
LT CNLDPQDLAKLEA+++ ATCSFFRQPA FA
Sbjct: 61 LTTCNLDPQDLAKLEAKSI----------------------------ATCSFFRQPASFA 92
Query: 816 PDNELSLAELAALDMCHKRAIFKPMSEDERQELKQKCGGSWKLVLRFFIAGEACTRREKS 995
PD ELS++ELAALDMC KRAIFKPM+ +ERQ+LKQ+CGGSWKLVLRF +AGEAC RRE+S
Sbjct: 93 PDYELSMSELAALDMCQKRAIFKPMTPEERQDLKQRCGGSWKLVLRFLLAGEACCRRERS 152
Query: 996 QAIAGPGHSIAVTSKGTVYSFGSNSSGQLGHGTMEEDWRPRPIRSLXXXXXXXXXXXXXX 1175
QAIAGPGHSIAVTS G YSFGSNSSGQLGHGT EE+WRPR IRSL
Sbjct: 153 QAIAGPGHSIAVTSNGVAYSFGSNSSGQLGHGTTEEEWRPRQIRSLQGIRIIQAAAGPGR 212
Query: 1176 TMLISDAGQVYAIGKDSFGEAEYGAQGINVVNTPQLVDSLKNIFVVQAAIGNFFTAVLSR 1355
TMLISDAG+VYA GKDSFGEAEYG QG V TPQLV+SLKNIFVVQAAIGNFFTAVLSR
Sbjct: 213 TMLISDAGEVYAFGKDSFGEAEYGVQGTKTVTTPQLVESLKNIFVVQAAIGNFFTAVLSR 272
Query: 1356 EGRVYTFSWGNENKIGHQTEPNDLDPHPLLGALENIPVVQIXXXXXXXXXXXXQPSGMSV 1535
EGRVYTFSWGN+ K+GHQTEPND+ PHPLLGALENIPVVQI QPSGMSV
Sbjct: 273 EGRVYTFSWGNDGKLGHQTEPNDVVPHPLLGALENIPVVQIAAGYCYLLALACQPSGMSV 332
Query: 1536 YSVXXXXXXXXXXXTRTDEKLPRLIEQFRTL 1628
YSV +RTDEK PRLIEQF+ L
Sbjct: 333 YSVGCGLGGKLGHGSRTDEKYPRLIEQFQLL 363
>emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]
Length = 541
Score = 511 bits (1317), Expect = e-142
Identities = 267/391 (68%), Positives = 289/391 (73%)
Frame = +3
Query: 456 MDATTSGTDTFQYRKISDQSVNALVTSSPRSFQRQQRHCFGDAIPGEFPLSANPSIVLHV 635
MDAT SGT T QY I DQ + A+VTS +FQRQQRHCFGD+ PGEFPL+ANPSIVLHV
Sbjct: 1 MDATRSGTPTVQYHNIPDQPIAAIVTSPLPTFQRQQRHCFGDSSPGEFPLAANPSIVLHV 60
Query: 636 LTGCNLDPQDLAKLEARTLFLFNQVLDLFLVD*N**CC*LDLNIVLQATCSFFRQPADFA 815
LT CNL+PQDLAKLEA ATCSFFRQPA FA
Sbjct: 61 LTACNLEPQDLAKLEA------------------------------SATCSFFRQPAHFA 90
Query: 816 PDNELSLAELAALDMCHKRAIFKPMSEDERQELKQKCGGSWKLVLRFFIAGEACTRREKS 995
PD ELS++ELAALDMC KRAIF+PM +ER+ LKQ+CGGSWKLVLRF +AGEAC RREKS
Sbjct: 91 PDFELSISELAALDMCLKRAIFRPMXLEEREVLKQRCGGSWKLVLRFLLAGEACCRREKS 150
Query: 996 QAIAGPGHSIAVTSKGTVYSFGSNSSGQLGHGTMEEDWRPRPIRSLXXXXXXXXXXXXXX 1175
QAIAGPGHSIAVT KG VYSFGSNSSGQLGHGT +E+WRPR IRSL
Sbjct: 151 QAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGR 210
Query: 1176 TMLISDAGQVYAIGKDSFGEAEYGAQGINVVNTPQLVDSLKNIFVVQAAIGNFFTAVLSR 1355
TMLISDAGQVYA GKDSFGEAEYG QG +V TPQLV+SLKNIFVVQAAIGNFFTAVLSR
Sbjct: 211 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSR 270
Query: 1356 EGRVYTFSWGNENKIGHQTEPNDLDPHPLLGALENIPVVQIXXXXXXXXXXXXQPSGMSV 1535
EGRVYTFSWGN+ K+GHQTE NDL+PHPLLGALENIPVVQI QP+GMSV
Sbjct: 271 EGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSV 330
Query: 1536 YSVXXXXXXXXXXXTRTDEKLPRLIEQFRTL 1628
YSV TRTDEK PRLIEQF+ L
Sbjct: 331 YSVGCGLGGKLGHGTRTDEKHPRLIEQFQIL 361
Score = 60.5 bits (145), Expect = 2e-06
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Frame = +3
Query: 1044 TVYSFGSNSSGQLGHGTMEEDWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAIGKD 1223
+VYS G G+LGHGT ++ PR I ++ + A +G+D
Sbjct: 329 SVYSVGCGLGGKLGHGTRTDEKHPRLIEQFQILNLQPM-------VVAAGAWHAAVVGRD 381
Query: 1224 ----SFGEAEYGAQGIN---VVNTPQLVDSLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 1382
++G YG G + P++V++L N+ V A G++ T V+S +G VY+F
Sbjct: 382 GRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGC 441
Query: 1383 GNENKIGHQTEPN 1421
G + +GH P+
Sbjct: 442 GESSSLGHNNGPD 454
>ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
[Vitis vinifera] gi|296081404|emb|CBI16837.3| unnamed
protein product [Vitis vinifera]
Length = 534
Score = 511 bits (1315), Expect = e-142
Identities = 267/391 (68%), Positives = 288/391 (73%)
Frame = +3
Query: 456 MDATTSGTDTFQYRKISDQSVNALVTSSPRSFQRQQRHCFGDAIPGEFPLSANPSIVLHV 635
MDAT SGT T QY I DQ + A+VTS +FQRQQRHCFGD+ PGEFPL+ANPSIVLHV
Sbjct: 1 MDATRSGTPTVQYHNIPDQPIAAIVTSPLPTFQRQQRHCFGDSSPGEFPLAANPSIVLHV 60
Query: 636 LTGCNLDPQDLAKLEARTLFLFNQVLDLFLVD*N**CC*LDLNIVLQATCSFFRQPADFA 815
LT CNL+PQDLAKLEA TCSFFRQPA FA
Sbjct: 61 LTACNLEPQDLAKLEA--------------------------------TCSFFRQPAHFA 88
Query: 816 PDNELSLAELAALDMCHKRAIFKPMSEDERQELKQKCGGSWKLVLRFFIAGEACTRREKS 995
PD ELS++ELAALDMC KRAIF+PM +ER+ LKQ+CGGSWKLVLRF +AGEAC RREKS
Sbjct: 89 PDFELSISELAALDMCLKRAIFRPMMLEEREVLKQRCGGSWKLVLRFLLAGEACCRREKS 148
Query: 996 QAIAGPGHSIAVTSKGTVYSFGSNSSGQLGHGTMEEDWRPRPIRSLXXXXXXXXXXXXXX 1175
QAIAGPGHSIAVT KG VYSFGSNSSGQLGHGT +E+WRPR IRSL
Sbjct: 149 QAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGR 208
Query: 1176 TMLISDAGQVYAIGKDSFGEAEYGAQGINVVNTPQLVDSLKNIFVVQAAIGNFFTAVLSR 1355
TMLISDAGQVYA GKDSFGEAEYG QG +V TPQLV+SLKNIFVVQAAIGNFFTAVLSR
Sbjct: 209 TMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSR 268
Query: 1356 EGRVYTFSWGNENKIGHQTEPNDLDPHPLLGALENIPVVQIXXXXXXXXXXXXQPSGMSV 1535
EGRVYTFSWGN+ K+GHQTE NDL+PHPLLGALENIPVVQI QP+GMSV
Sbjct: 269 EGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSV 328
Query: 1536 YSVXXXXXXXXXXXTRTDEKLPRLIEQFRTL 1628
YSV TRTDEK PRLIEQFR L
Sbjct: 329 YSVGCGLGGKLGHGTRTDEKHPRLIEQFRIL 359
Score = 60.5 bits (145), Expect = 2e-06
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Frame = +3
Query: 1044 TVYSFGSNSSGQLGHGTMEEDWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAIGKD 1223
+VYS G G+LGHGT ++ PR I ++ + A +G+D
Sbjct: 327 SVYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILNLQPM-------VVAAGAWHAAVVGRD 379
Query: 1224 ----SFGEAEYGAQGIN---VVNTPQLVDSLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 1382
++G YG G + P++V++L N+ V A G++ T V+S +G VY+F
Sbjct: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGC 439
Query: 1383 GNENKIGHQTEPN 1421
G + +GH P+
Sbjct: 440 GESSSLGHNNGPD 452
>ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula]
gi|355490917|gb|AES72120.1| RCC1 domain-containing
protein [Medicago truncatula]
Length = 535
Score = 502 bits (1293), Expect = e-139
Identities = 259/392 (66%), Positives = 291/392 (74%), Gaps = 1/392 (0%)
Frame = +3
Query: 456 MDATTSGTDTFQYRKISDQSVNALVTSSPR-SFQRQQRHCFGDAIPGEFPLSANPSIVLH 632
MDATTSGT T QY I+DQ++ A+V ++P +FQRQQR C G++ PGEFPLSA+PSIVLH
Sbjct: 1 MDATTSGTPTIQYHNITDQTITAIVVATPLPTFQRQQRQCLGNSTPGEFPLSASPSIVLH 60
Query: 633 VLTGCNLDPQDLAKLEARTLFLFNQVLDLFLVD*N**CC*LDLNIVLQATCSFFRQPADF 812
VLT CNLDPQDLAKLEA TCSFFRQPA+F
Sbjct: 61 VLTSCNLDPQDLAKLEA--------------------------------TCSFFRQPANF 88
Query: 813 APDNELSLAELAALDMCHKRAIFKPMSEDERQELKQKCGGSWKLVLRFFIAGEACTRREK 992
APD LSLAELAA DMC KRAIFKPM+ +ERQ+LKQ+CGGSWKLVLR+ +AGEAC RREK
Sbjct: 89 APDFALSLAELAAFDMCMKRAIFKPMTTEERQDLKQRCGGSWKLVLRYLLAGEACCRREK 148
Query: 993 SQAIAGPGHSIAVTSKGTVYSFGSNSSGQLGHGTMEEDWRPRPIRSLXXXXXXXXXXXXX 1172
SQAIAGPGHSIAVTSKG VYSFGSNSSGQLGHGT EE+WRP+PIR+L
Sbjct: 149 SQAIAGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEEWRPKPIRTLQGIRIIQAAAGAG 208
Query: 1173 XTMLISDAGQVYAIGKDSFGEAEYGAQGINVVNTPQLVDSLKNIFVVQAAIGNFFTAVLS 1352
TMLI+D+GQVYA GKDSFGEAEYG QG V P+LV+SLKNIFVVQAAIGNFFTAVLS
Sbjct: 209 RTMLITDSGQVYAFGKDSFGEAEYGGQGSKTVIAPRLVESLKNIFVVQAAIGNFFTAVLS 268
Query: 1353 REGRVYTFSWGNENKIGHQTEPNDLDPHPLLGALENIPVVQIXXXXXXXXXXXXQPSGMS 1532
REGRVYTFSWG++ K+GH T+ ND++PHPLLGALE+IPVVQI QPSGMS
Sbjct: 269 REGRVYTFSWGSDGKLGHHTDSNDMEPHPLLGALEDIPVVQIAAGYCYLLCLACQPSGMS 328
Query: 1533 VYSVXXXXXXXXXXXTRTDEKLPRLIEQFRTL 1628
VYSV TRTDEK PRLIEQF+TL
Sbjct: 329 VYSVGCGLGGKLGHGTRTDEKFPRLIEQFQTL 360
Score = 58.2 bits (139), Expect = 8e-06
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 6/167 (3%)
Frame = +3
Query: 996 QAIAGPGHSIAVTSKGTVYSFGSNSSGQLGHGTMEEDWRPRPIRSLXXXXXXXXXXXXXX 1175
QA G + ++ +G VY+F S G+LGH T D P P+
Sbjct: 256 QAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDSNDMEPHPLLGALEDIPVVQIAAGYC 315
Query: 1176 TMLI----SDAGQVYAIGKDSFGEAEYGAQGINVVNTPQLVDSLK--NIFVVQAAIGNFF 1337
+L VY++G G+ +G + P+L++ + N+ + + G +
Sbjct: 316 YLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDE--KFPRLIEQFQTLNLQPMVISAGAWH 373
Query: 1338 TAVLSREGRVYTFSWGNENKIGHQTEPNDLDPHPLLGALENIPVVQI 1478
AV+ R+GRV T+ WG +GH E + P ++ AL N+ V +
Sbjct: 374 AAVVGRDGRVCTWGWGRYGCLGHGNEECEAAP-KVVDALTNVKAVHV 419
>ref|XP_002515036.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
gi|223546087|gb|EEF47590.1| RCC1 and BTB
domain-containing protein, putative [Ricinus communis]
Length = 537
Score = 494 bits (1273), Expect = e-137
Identities = 257/392 (65%), Positives = 286/392 (72%), Gaps = 1/392 (0%)
Frame = +3
Query: 456 MDATTSGTDTFQYRKIS-DQSVNALVTSSPRSFQRQQRHCFGDAIPGEFPLSANPSIVLH 632
MDATTSGT + QY I+ DQ + A+V + +FQR QRHCFG++ PGEFPL+A+PSIVLH
Sbjct: 1 MDATTSGTSSIQYHNITTDQPITAIVAAPVSTFQRNQRHCFGESSPGEFPLAASPSIVLH 60
Query: 633 VLTGCNLDPQDLAKLEARTLFLFNQVLDLFLVD*N**CC*LDLNIVLQATCSFFRQPADF 812
VLT CNLDPQDLAKLEA L L QPA+F
Sbjct: 61 VLTTCNLDPQDLAKLEASALLL---------------------------------QPANF 87
Query: 813 APDNELSLAELAALDMCHKRAIFKPMSEDERQELKQKCGGSWKLVLRFFIAGEACTRREK 992
APD ELS++ELAALDMC KRAIFKPM+ +ER++LKQ+CGGSWKLVLRF +AGEAC RRE
Sbjct: 88 APDYELSISELAALDMCQKRAIFKPMTSEERRDLKQRCGGSWKLVLRFLLAGEACCRREN 147
Query: 993 SQAIAGPGHSIAVTSKGTVYSFGSNSSGQLGHGTMEEDWRPRPIRSLXXXXXXXXXXXXX 1172
SQAIAGPGHSIAVTSKG VYSFGSNSSGQLGHG EE+WRPR IRSL
Sbjct: 148 SQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGNTEEEWRPRQIRSLQGIRIIQAAAGPG 207
Query: 1173 XTMLISDAGQVYAIGKDSFGEAEYGAQGINVVNTPQLVDSLKNIFVVQAAIGNFFTAVLS 1352
TMLISDAGQVYA GKDSFGEAEYG QG +V TPQLV+SLKNIFVVQAAIGNFFTAVLS
Sbjct: 208 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAAIGNFFTAVLS 267
Query: 1353 REGRVYTFSWGNENKIGHQTEPNDLDPHPLLGALENIPVVQIXXXXXXXXXXXXQPSGMS 1532
REGRVYTFSWG++ K+GHQTEP D++PHPLLGALENIPVVQI QPSGMS
Sbjct: 268 REGRVYTFSWGSDGKLGHQTEPTDVEPHPLLGALENIPVVQIAAGYCYLLALACQPSGMS 327
Query: 1533 VYSVXXXXXXXXXXXTRTDEKLPRLIEQFRTL 1628
VYSV +RTDEK PRLIEQF+ L
Sbjct: 328 VYSVGCGLGGKLGHGSRTDEKYPRLIEQFQLL 359
Score = 59.7 bits (143), Expect = 3e-06
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Frame = +3
Query: 1044 TVYSFGSNSSGQLGHGTMEEDWRPRPIRSLXXXXXXXXXXXXXXTMLISDAGQVYAIGKD 1223
+VYS G G+LGHG+ ++ PR I ++ + A +G+D
Sbjct: 327 SVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQLLNLQPM-------VVAAGAWHAAVVGRD 379
Query: 1224 ----SFGEAEYGAQGIN---VVNTPQLVDSLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 1382
++G YG G + P++VD+L NI V A G++ T V+S EG VY+F
Sbjct: 380 GRVCTWGWGRYGCLGHGNEECESVPKVVDALSNIKAVHVATGDYTTFVVSEEGDVYSFGC 439
Query: 1383 GNENKIGH 1406
G +GH
Sbjct: 440 GESASLGH 447
Score = 59.3 bits (142), Expect = 3e-06
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Frame = +3
Query: 996 QAIAGPGHSIAVTSKGTVYSFGSNSSGQLGHGTMEEDWRPRPIRSLXXXXXXXXXXXXXX 1175
QA G + ++ +G VY+F S G+LGH T D P P+
Sbjct: 255 QAAIGNFFTAVLSREGRVYTFSWGSDGKLGHQTEPTDVEPHPLLGALENIPVVQIAAGYC 314
Query: 1176 TMLI----SDAGQVYAIGKDSFGEAEYGAQGINVVNTPQLVDS--LKNIFVVQAAIGNFF 1337
+L VY++G G+ +G++ P+L++ L N+ + A G +
Sbjct: 315 YLLALACQPSGMSVYSVGCGLGGKLGHGSRTDE--KYPRLIEQFQLLNLQPMVVAAGAWH 372
Query: 1338 TAVLSREGRVYTFSWGNENKIGHQTEPNDLDPHPLLGALENIPVVQI 1478
AV+ R+GRV T+ WG +GH E + P ++ AL NI V +
Sbjct: 373 AAVVGRDGRVCTWGWGRYGCLGHGNEECESVP-KVVDALSNIKAVHV 418