BLASTX nr result

ID: Cnidium21_contig00002147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002147
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276984.1| PREDICTED: translation initiation factor IF-...   239   7e-61
ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|2...   234   2e-59
ref|XP_003519163.1| PREDICTED: translation initiation factor IF-...   232   9e-59
ref|NP_001242651.1| uncharacterized protein LOC100780734 [Glycin...   230   3e-58
ref|XP_002533227.1| translation initiation factor if-3, putative...   229   8e-58

>ref|XP_002276984.1| PREDICTED: translation initiation factor IF-3 [Vitis vinifera]
           gi|297743667|emb|CBI36550.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score =  239 bits (609), Expect = 7e-61
 Identities = 119/171 (69%), Positives = 147/171 (85%)
 Frame = -3

Query: 518 NDDDQALNISSIRSENVRLIDDKQNMIGIVSKNEALQRAEDAELDLVILSPDADPPVVRL 339
           +DDDQAL++SSIRS +VRLID++QNM+G+VSK++A+Q AEDAELDLV+LSPDADPPVVR+
Sbjct: 77  SDDDQALDVSSIRSASVRLIDEQQNMVGVVSKSQAIQMAEDAELDLVVLSPDADPPVVRI 136

Query: 338 MDYNKFXXXXXXXXXXXXXKSAAHRMDLKELKMGYNIDVHDYTVRLKAALKFLKAGDKVK 159
           MDYNK+             KSAA+RMDLKELKMGYNID HDY+VRLKAA KFL+ GDKVK
Sbjct: 137 MDYNKYRYELQKKKRGQQKKSAANRMDLKELKMGYNIDSHDYSVRLKAARKFLQDGDKVK 196

Query: 158 VVVQLKGRESDFRNKAIELIRRFQSDVGELAVEESKSFKDKSMTLVMVPNK 6
           ++V LKGRE++FRN AIELIRRFQ+DVGELA EESK+F  +++ +V+VPNK
Sbjct: 197 IIVNLKGRENEFRNIAIELIRRFQNDVGELATEESKNFSVRNIFIVLVPNK 247


>ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|222866557|gb|EEF03688.1|
           predicted protein [Populus trichocarpa]
          Length = 278

 Score =  234 bits (597), Expect = 2e-59
 Identities = 118/171 (69%), Positives = 140/171 (81%)
 Frame = -3

Query: 518 NDDDQALNISSIRSENVRLIDDKQNMIGIVSKNEALQRAEDAELDLVILSPDADPPVVRL 339
           +DDDQALNISSIRS  VRLID +QNM+G+V+  +A+Q AED EL+LVI+SPDADPPVVR+
Sbjct: 83  SDDDQALNISSIRSATVRLIDQQQNMVGVVTVRDAIQMAEDTELNLVIVSPDADPPVVRI 142

Query: 338 MDYNKFXXXXXXXXXXXXXKSAAHRMDLKELKMGYNIDVHDYTVRLKAALKFLKAGDKVK 159
           MDYNKF             KSAA RMDLKELKMGYNID HDY VRL+AA KFLK GDKVK
Sbjct: 143 MDYNKFRYEQQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYDVRLRAARKFLKDGDKVK 202

Query: 158 VVVQLKGRESDFRNKAIELIRRFQSDVGELAVEESKSFKDKSMTLVMVPNK 6
           V+V LKGRE++FRN AIEL+RRFQ+DVGELA EESK+F+D++  + +VPNK
Sbjct: 203 VIVNLKGRENEFRNNAIELLRRFQNDVGELATEESKNFRDRNAFITLVPNK 253


>ref|XP_003519163.1| PREDICTED: translation initiation factor IF-3-like isoform 1
           [Glycine max]
          Length = 275

 Score =  232 bits (591), Expect = 9e-59
 Identities = 114/177 (64%), Positives = 146/177 (82%)
 Frame = -3

Query: 533 RQGGSNDDDQALNISSIRSENVRLIDDKQNMIGIVSKNEALQRAEDAELDLVILSPDADP 354
           +   S+DDD+AL++S++RS+ VRLID  QNM+G+VS ++A+Q AED ELDLVILSPDADP
Sbjct: 73  KSSDSDDDDKALDLSTLRSDTVRLIDQSQNMVGVVSIDDAIQMAEDVELDLVILSPDADP 132

Query: 353 PVVRLMDYNKFXXXXXXXXXXXXXKSAAHRMDLKELKMGYNIDVHDYTVRLKAALKFLKA 174
           PVVR+MDY+K+             KSAA+RMDLKELKMGYNID HDY+VRLKAA KFLK 
Sbjct: 133 PVVRIMDYSKYRYEQQKKKREQQKKSAANRMDLKELKMGYNIDEHDYSVRLKAAQKFLKD 192

Query: 173 GDKVKVVVQLKGRESDFRNKAIELIRRFQSDVGELAVEESKSFKDKSMTLVMVPNKV 3
           GDKVKV+V LKGRE++FRN AI LI RFQ+DVGEL +EE+K+F+D+++ +++VPNKV
Sbjct: 193 GDKVKVIVNLKGRENEFRNMAIGLITRFQNDVGELGIEETKNFRDRNIFIILVPNKV 249


>ref|NP_001242651.1| uncharacterized protein LOC100780734 [Glycine max]
           gi|255638877|gb|ACU19741.1| unknown [Glycine max]
          Length = 275

 Score =  230 bits (587), Expect = 3e-58
 Identities = 113/177 (63%), Positives = 146/177 (82%)
 Frame = -3

Query: 533 RQGGSNDDDQALNISSIRSENVRLIDDKQNMIGIVSKNEALQRAEDAELDLVILSPDADP 354
           +   S+DDD+AL++S++RS+ VRLID  QNM+G+VS ++A+Q AED ELDLVILSPDADP
Sbjct: 73  KSSDSDDDDKALDLSTLRSDTVRLIDQSQNMVGVVSIDDAIQMAEDVELDLVILSPDADP 132

Query: 353 PVVRLMDYNKFXXXXXXXXXXXXXKSAAHRMDLKELKMGYNIDVHDYTVRLKAALKFLKA 174
           PVVR+MDY+K+             KSAA+RMDLKELKMGYNID HDY+VRLKAA KFLK 
Sbjct: 133 PVVRIMDYSKYRYEQQKKKRGQQKKSAANRMDLKELKMGYNIDEHDYSVRLKAAQKFLKD 192

Query: 173 GDKVKVVVQLKGRESDFRNKAIELIRRFQSDVGELAVEESKSFKDKSMTLVMVPNKV 3
           G+KVKV+V LKGRE++FRN AI LI RFQ+DVGEL +EE+K+F+D+++ +++VPNKV
Sbjct: 193 GNKVKVIVNLKGRENEFRNMAIALITRFQNDVGELGIEETKNFRDRNIFIILVPNKV 249


>ref|XP_002533227.1| translation initiation factor if-3, putative [Ricinus communis]
           gi|223526947|gb|EEF29148.1| translation initiation
           factor if-3, putative [Ricinus communis]
          Length = 274

 Score =  229 bits (583), Expect = 8e-58
 Identities = 118/177 (66%), Positives = 144/177 (81%)
 Frame = -3

Query: 536 NRQGGSNDDDQALNISSIRSENVRLIDDKQNMIGIVSKNEALQRAEDAELDLVILSPDAD 357
           +RQ  S +DD AL+IS+IRS  VRLID++QNM+G+V K+EA+Q AE+A LDLVILSPDAD
Sbjct: 74  SRQSDS-EDDHALDISTIRSATVRLIDEQQNMVGVVPKSEAIQMAENAALDLVILSPDAD 132

Query: 356 PPVVRLMDYNKFXXXXXXXXXXXXXKSAAHRMDLKELKMGYNIDVHDYTVRLKAALKFLK 177
           PPVVR+MDYNK+             KSAA RMDLKELKMGYNID HDY VRL+AA KFLK
Sbjct: 133 PPVVRIMDYNKYRYELQKKKKGQQKKSAATRMDLKELKMGYNIDQHDYDVRLRAARKFLK 192

Query: 176 AGDKVKVVVQLKGRESDFRNKAIELIRRFQSDVGELAVEESKSFKDKSMTLVMVPNK 6
            GDKVKV+V LKGRE++FRN AIELIRRFQ+DVGELA EE+K+F+D+++ + + PNK
Sbjct: 193 DGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELATEETKNFRDRNIFITLAPNK 249


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