BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002139
         (3481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode...  2110   0.0  
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta...  2093   0.0  
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ...  2092   0.0  
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su...  2090   0.0  
ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II su...  2083   0.0  

>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
          Length = 1191

 Score = 2110 bits (5468), Expect = 0.0
 Identities = 1048/1124 (93%), Positives = 1070/1124 (95%)
 Frame = -2

Query: 3372 EEEYDPAYNEDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDESADI 3193
            EEEYDP   EDE E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 6    EEEYDPTM-EDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 64

Query: 3192 EIRPESQHNPGHQNDFAETIYKISFSQIFLSKPMMTESDGETATLFPKAARLRNLTYSAP 3013
            EIRPESQHNPGHQ+DFAETIYKISF QI+LSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 65   EIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 124

Query: 3012 LYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELGECPY 2833
            LY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTELGECPY
Sbjct: 125  LYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 184

Query: 2832 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVR 2653
            DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPSTMFVR
Sbjct: 185  DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVR 244

Query: 2652 MLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL 2473
            MLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL
Sbjct: 245  MLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL 304

Query: 2472 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETK 2293
            LRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETK
Sbjct: 305  LRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETK 364

Query: 2292 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVRGYVQ 2113
            KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDVRGYVQ
Sbjct: 365  KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 424

Query: 2112 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 1933
            KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH
Sbjct: 425  KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 484

Query: 1932 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSAAYPI 1753
            LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGSAAYPI
Sbjct: 485  LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI 544

Query: 1752 LEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVG 1573
            LEFLEEWGTENFEEISPAVI QATKIFVNGCWVGIHRDPDM             VNTEVG
Sbjct: 545  LEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVG 604

Query: 1572 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLVAKGF 1393
            VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI+RKDI+ALQQ+E+PEDGGWHDLVAKGF
Sbjct: 605  VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGF 664

Query: 1392 XXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 1213
                             INDL SAR NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 665  IEYIDTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHN 724

Query: 1212 QSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 1033
            QSPRNTYQSAMGKQAMGIYVTN+QFRMDT+AYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 725  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTVAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 784

Query: 1032 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 853
            AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT
Sbjct: 785  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 844

Query: 852  MGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIXXXXXXXXXXASRYTRRDHSTSLR 673
            MGMRHGSYDKLDDDGLAPPGTR SGEDV+IGKTTPI          A+RYTRRDHSTSLR
Sbjct: 845  MGMRHGSYDKLDDDGLAPPGTRVSGEDVVIGKTTPI--AQDEAQGPAARYTRRDHSTSLR 902

Query: 672  HSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT 493
            HSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT
Sbjct: 903  HSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT 962

Query: 492  AEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHIGKEGDATPFTDVTVDNISKALHKC 313
             EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAH+GKEGDATPFTDVTVDNISKALHKC
Sbjct: 963  MEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKC 1022

Query: 312  GYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR 133
            GYQMRGFETMYNGHTGRRLT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR
Sbjct: 1023 GYQMRGFETMYNGHTGRRLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR 1082

Query: 132  SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKC 1
            SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCE+C
Sbjct: 1083 SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERC 1126


>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
            gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
            II subunit, putative [Ricinus communis]
          Length = 1194

 Score = 2093 bits (5424), Expect = 0.0
 Identities = 1041/1131 (92%), Positives = 1067/1131 (94%), Gaps = 4/1131 (0%)
 Frame = -2

Query: 3381 MDMEEEYDPAYNED----EGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEI 3214
            M+ ++EYD   NED    + ++ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1    MEDDQEYDQNLNEDYEDEDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60

Query: 3213 VDESADIEIRPESQHNPGHQNDFAETIYKISFSQIFLSKPMMTESDGETATLFPKAARLR 3034
            VDESADIEIRPESQHNPGHQ+DFAETIYKISF QI+LSKPMMTESDGETATLFPKAARLR
Sbjct: 61   VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120

Query: 3033 NLTYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLT 2854
            NLTYSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLT
Sbjct: 121  NLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180

Query: 2853 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 2674
            ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRP
Sbjct: 181  ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240

Query: 2673 PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFA 2494
            PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+
Sbjct: 241  PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300

Query: 2493 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGV 2314
            DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGV
Sbjct: 301  DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360

Query: 2313 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTR 2134
            GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTR
Sbjct: 361  GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420

Query: 2133 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 1954
            DVR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421  DVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480

Query: 1953 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTV 1774
            YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TV
Sbjct: 481  YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540

Query: 1773 GSAAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXX 1594
            GSAAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCWVGIHRDPDM            
Sbjct: 541  GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRV 600

Query: 1593 XVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWH 1414
             VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI++KDI ALQQ+ES E+GGWH
Sbjct: 601  DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWH 660

Query: 1413 DLVAKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASI 1234
            DLVAKGF                 I+DL  AR NPEEAYSDTYTHCEIHPSLILGVCASI
Sbjct: 661  DLVAKGFIEYIDTEEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASI 720

Query: 1233 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1054
            IPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721  IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780

Query: 1053 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 874
            QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781  QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840

Query: 873  RPDRANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIXXXXXXXXXXASRYTRR 694
            RPDRANTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI          ++RYTRR
Sbjct: 841  RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI--AQEEAQGQSARYTRR 898

Query: 693  DHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 514
            DHS SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT
Sbjct: 899  DHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 958

Query: 513  QEDMPWTAEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHIGKEGDATPFTDVTVDNI 334
            QEDMPWT EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAH+GKEGDATPFTDVTVDNI
Sbjct: 959  QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 1018

Query: 333  SKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 154
            SKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT
Sbjct: 1019 SKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 1078

Query: 153  RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKC 1
            RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+C
Sbjct: 1079 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERC 1129


>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
            gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
            Full=DNA-directed RNA polymerase II subunit RPB2;
            Short=RNA polymerase II subunit 2; Short=RNA polymerase
            II subunit B2; AltName: Full=DNA-directed RNA polymerase
            II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
            polymerase II subunit 2 [Solanum lycopersicum]
          Length = 1191

 Score = 2092 bits (5421), Expect = 0.0
 Identities = 1037/1128 (91%), Positives = 1069/1128 (94%), Gaps = 1/1128 (0%)
 Frame = -2

Query: 3381 MDMEEEYDPAYN-EDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDE 3205
            MDME+EY+P YN +D+ E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1    MDMEDEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60

Query: 3204 SADIEIRPESQHNPGHQNDFAETIYKISFSQIFLSKPMMTESDGETATLFPKAARLRNLT 3025
            SADIEIRPESQHNPGHQ+DFAETIYKI+F QI+LSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61   SADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120

Query: 3024 YSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELG 2845
            YSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTELG
Sbjct: 121  YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180

Query: 2844 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPST 2665
            ECP DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMA++QNRPPST
Sbjct: 181  ECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMADTQNRPPST 240

Query: 2664 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQ 2485
            MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQ
Sbjct: 241  MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQ 300

Query: 2484 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 2305
            MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY
Sbjct: 301  MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 360

Query: 2304 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVR 2125
            CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDVR
Sbjct: 361  CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420

Query: 2124 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 1945
            GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421  GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480

Query: 1944 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSA 1765
            TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGSA
Sbjct: 481  TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540

Query: 1764 AYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVN 1585
            AYPILEFLEEWGTENFEEISPAVI QATKIFVNG WVGIHRDPDM             VN
Sbjct: 541  AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVN 600

Query: 1584 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLV 1405
            TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRL+I++KDI+ LQQ+ESP++GGWHDLV
Sbjct: 601  TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLV 660

Query: 1404 AKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPF 1225
            AKG+                 INDL  AR NP +AYSDTYTHCEIHPSLILGVCASIIPF
Sbjct: 661  AKGYIEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPF 720

Query: 1224 PDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 1045
            PDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
Sbjct: 721  PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 780

Query: 1044 AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 865
            AGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
Sbjct: 781  AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 840

Query: 864  RANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIXXXXXXXXXXASRYTRRDHS 685
            RA+TMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI          ASRYTR+DHS
Sbjct: 841  RASTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI--SQDDAQGQASRYTRKDHS 898

Query: 684  TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 505
            TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 899  TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 958

Query: 504  MPWTAEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHIGKEGDATPFTDVTVDNISKA 325
            MPWT EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAH+GKEGDATPFTDVTVDNISKA
Sbjct: 959  MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1018

Query: 324  LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 145
            LHKCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1019 LHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1078

Query: 144  AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKC 1
            AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+C
Sbjct: 1079 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERC 1126


>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
            max]
          Length = 1192

 Score = 2090 bits (5414), Expect = 0.0
 Identities = 1040/1131 (91%), Positives = 1065/1131 (94%), Gaps = 4/1131 (0%)
 Frame = -2

Query: 3381 MDMEEE--YDPAY--NEDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEI 3214
            MD+EEE  YD      ED+ E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1    MDLEEEQEYDEQMMEEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60

Query: 3213 VDESADIEIRPESQHNPGHQNDFAETIYKISFSQIFLSKPMMTESDGETATLFPKAARLR 3034
            VDESADIEIRPESQHNPGHQ+DFAETIYKISF QI+LSKPMMTESDGETATLFPKAARLR
Sbjct: 61   VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120

Query: 3033 NLTYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLT 2854
            NLTYSAPLY DVSKRVIKKGHDGEEVTE QDF KVFIGKVPIMLRSSYCTLYQN+EKDLT
Sbjct: 121  NLTYSAPLYVDVSKRVIKKGHDGEEVTEAQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180

Query: 2853 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 2674
            ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRP
Sbjct: 181  ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240

Query: 2673 PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFA 2494
            PSTMFVRMLSRTS+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+
Sbjct: 241  PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300

Query: 2493 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGV 2314
             TQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGV
Sbjct: 301  YTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360

Query: 2313 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTR 2134
            GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTR
Sbjct: 361  GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420

Query: 2133 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 1954
            DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421  DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480

Query: 1953 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTV 1774
            YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TV
Sbjct: 481  YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540

Query: 1773 GSAAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXX 1594
            GSAAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCW+GIHRDPDM            
Sbjct: 541  GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLKKLRRRV 600

Query: 1593 XVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWH 1414
             VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLI++KDI ALQQ+ESPEDGGWH
Sbjct: 601  DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWH 660

Query: 1413 DLVAKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASI 1234
            DLV+KGF                 INDL  AR NPE+AYSDTYTHCEIHPSLILGVCASI
Sbjct: 661  DLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYSDTYTHCEIHPSLILGVCASI 720

Query: 1233 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1054
            IPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721  IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780

Query: 1053 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 874
            QLPAGINAIV+IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781  QLPAGINAIVSIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840

Query: 873  RPDRANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIXXXXXXXXXXASRYTRR 694
            RPDRANTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI            RYTRR
Sbjct: 841  RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQAL--RYTRR 898

Query: 693  DHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 514
            DHS SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT
Sbjct: 899  DHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 958

Query: 513  QEDMPWTAEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHIGKEGDATPFTDVTVDNI 334
            QEDMPWT EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAH+GKEGDATPFTDVTVDNI
Sbjct: 959  QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 1018

Query: 333  SKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 154
            SKALHKCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT
Sbjct: 1019 SKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 1078

Query: 153  RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKC 1
            RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+C
Sbjct: 1079 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERC 1129


>ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
            max]
          Length = 1193

 Score = 2083 bits (5397), Expect = 0.0
 Identities = 1037/1131 (91%), Positives = 1063/1131 (93%), Gaps = 4/1131 (0%)
 Frame = -2

Query: 3381 MDMEEE--YDPAYNE--DEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEI 3214
            MD+EEE  YD    E  D+ E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1    MDLEEEQEYDEQMMEEDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60

Query: 3213 VDESADIEIRPESQHNPGHQNDFAETIYKISFSQIFLSKPMMTESDGETATLFPKAARLR 3034
            VDESADIEIRPESQHNPGHQ+DFAETIYKISF QI+LSKPMMTESDGETATLFPKAARLR
Sbjct: 61   VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120

Query: 3033 NLTYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLT 2854
            NLTYSAPLY DVSKRV+KKGHDGEEVTETQD  KVFIGKVPIMLRSSYCTLYQN+EKDLT
Sbjct: 121  NLTYSAPLYVDVSKRVVKKGHDGEEVTETQDLTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180

Query: 2853 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 2674
            ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRP
Sbjct: 181  ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240

Query: 2673 PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFA 2494
            PSTMFVRMLSRTS+KGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+
Sbjct: 241  PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300

Query: 2493 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGV 2314
            DT MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGV
Sbjct: 301  DTLMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360

Query: 2313 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTR 2134
            GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTR
Sbjct: 361  GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420

Query: 2133 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 1954
            DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421  DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480

Query: 1953 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTV 1774
            YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TV
Sbjct: 481  YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540

Query: 1773 GSAAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXX 1594
            GSAAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCW+GIHRDPDM            
Sbjct: 541  GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRV 600

Query: 1593 XVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWH 1414
             VNTEVGVVRDI LKELRIYTDYGRCSRPLFIV+KQRLLI++KDI ALQQ+ESPEDGGWH
Sbjct: 601  DVNTEVGVVRDIILKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWH 660

Query: 1413 DLVAKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASI 1234
            DLV+KGF                 INDL  AR NPE+AY+ TYTHCEIHPSLILGVCASI
Sbjct: 661  DLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYAGTYTHCEIHPSLILGVCASI 720

Query: 1233 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1054
            IPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721  IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780

Query: 1053 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 874
            QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781  QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840

Query: 873  RPDRANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIXXXXXXXXXXASRYTRR 694
            RPDRANTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI            RYTRR
Sbjct: 841  RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQAL--RYTRR 898

Query: 693  DHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 514
            DHS SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT
Sbjct: 899  DHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 958

Query: 513  QEDMPWTAEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHIGKEGDATPFTDVTVDNI 334
            QEDMPWT EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAH+GKEGDATPFTDVTVDNI
Sbjct: 959  QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 1018

Query: 333  SKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 154
            SKALHKCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT
Sbjct: 1019 SKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 1078

Query: 153  RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKC 1
            RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+C
Sbjct: 1079 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERC 1129