BLASTX nr result

ID: Cnidium21_contig00002137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002137
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD65459.1| putative ribosomal protein L28 [Gossypium hirsutum]    245   9e-63
ref|XP_004146830.1| PREDICTED: 60S ribosomal protein L28-2-like ...   244   1e-62
ref|NP_001238207.1| uncharacterized protein LOC100500189 [Glycin...   240   2e-61
ref|XP_003543611.1| PREDICTED: 60S ribosomal protein L28-2 [Glyc...   240   3e-61
ref|XP_002514169.1| 60S ribosomal protein L28, putative [Ricinus...   239   4e-61

>gb|ABD65459.1| putative ribosomal protein L28 [Gossypium hirsutum]
          Length = 150

 Score =  245 bits (625), Expect = 9e-63
 Identities = 121/143 (84%), Positives = 133/143 (93%)
 Frame = +1

Query: 49  MTTVPGQLIWEIVKRNNCFLVKEFGNGNAGVQFSKESNNLYNLNSYKFSGLANKKTVTIQ 228
           M TVPGQLIWE+VKRNNCFLVK+FG G AGV+FSKE NNLYN+NSYK SGLANKKTVTIQ
Sbjct: 1   MATVPGQLIWEVVKRNNCFLVKQFGRGTAGVRFSKEPNNLYNVNSYKHSGLANKKTVTIQ 60

Query: 229 PAGKDQGVLLATSRTKKQSKPASLLNKSIMKKEFHRMAKAVSNQVADNYYRPDLKKASLA 408
           PAGKDQ VLLAT+++KKQ+KP+SLL+KS+MKKEF RMAKAV NQV DNYYRPDL KA+LA
Sbjct: 61  PAGKDQSVLLATTKSKKQNKPSSLLHKSVMKKEFPRMAKAVKNQVTDNYYRPDLTKAALA 120

Query: 409 RLSAVNRSLKVAKSGVKKRNRQA 477
           RLSAVNRSLKVAKSGVKKRNRQA
Sbjct: 121 RLSAVNRSLKVAKSGVKKRNRQA 143


>ref|XP_004146830.1| PREDICTED: 60S ribosomal protein L28-2-like isoform 1 [Cucumis
           sativus] gi|449458191|ref|XP_004146831.1| PREDICTED: 60S
           ribosomal protein L28-2-like isoform 2 [Cucumis sativus]
           gi|449476678|ref|XP_004154804.1| PREDICTED: 60S
           ribosomal protein L28-2-like isoform 1 [Cucumis sativus]
           gi|449476681|ref|XP_004154805.1| PREDICTED: 60S
           ribosomal protein L28-2-like isoform 2 [Cucumis sativus]
          Length = 148

 Score =  244 bits (624), Expect = 1e-62
 Identities = 122/143 (85%), Positives = 133/143 (93%)
 Frame = +1

Query: 49  MTTVPGQLIWEIVKRNNCFLVKEFGNGNAGVQFSKESNNLYNLNSYKFSGLANKKTVTIQ 228
           M  VPGQLIWEIVKRNN FLVKEFG G AGVQFSKE+NNLYNLNSYK SGLANKKTVTIQ
Sbjct: 1   MAAVPGQLIWEIVKRNNSFLVKEFGRGTAGVQFSKEANNLYNLNSYKHSGLANKKTVTIQ 60

Query: 229 PAGKDQGVLLATSRTKKQSKPASLLNKSIMKKEFHRMAKAVSNQVADNYYRPDLKKASLA 408
           P GKDQ +LLAT+++KKQ+KP+S L+KS+MKKEF RMAKAV+NQVADNYYRPDLKKA+LA
Sbjct: 61  PGGKDQSILLATTKSKKQNKPSSSLHKSLMKKEFRRMAKAVTNQVADNYYRPDLKKAALA 120

Query: 409 RLSAVNRSLKVAKSGVKKRNRQA 477
           RLSAVNRSLKVAKSGVKKRNRQA
Sbjct: 121 RLSAVNRSLKVAKSGVKKRNRQA 143


>ref|NP_001238207.1| uncharacterized protein LOC100500189 [Glycine max]
           gi|255629617|gb|ACU15156.1| unknown [Glycine max]
          Length = 150

 Score =  240 bits (613), Expect = 2e-61
 Identities = 117/143 (81%), Positives = 132/143 (92%)
 Frame = +1

Query: 49  MTTVPGQLIWEIVKRNNCFLVKEFGNGNAGVQFSKESNNLYNLNSYKFSGLANKKTVTIQ 228
           M TVPGQLIWE+VK+NN FLVKEFG G   VQFS+E NNLYNLN++K+SGLANKKTVT+Q
Sbjct: 1   MATVPGQLIWEVVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTVQ 60

Query: 229 PAGKDQGVLLATSRTKKQSKPASLLNKSIMKKEFHRMAKAVSNQVADNYYRPDLKKASLA 408
           P GKDQ VLLAT++TKKQ+KPA+LL+KS+MKKEF RMAKAV NQVADNYYRPDLKKA+LA
Sbjct: 61  PTGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKKAALA 120

Query: 409 RLSAVNRSLKVAKSGVKKRNRQA 477
           RLSAVNRSL+VAKSGVKKRNRQA
Sbjct: 121 RLSAVNRSLRVAKSGVKKRNRQA 143


>ref|XP_003543611.1| PREDICTED: 60S ribosomal protein L28-2 [Glycine max]
          Length = 150

 Score =  240 bits (612), Expect = 3e-61
 Identities = 117/143 (81%), Positives = 134/143 (93%)
 Frame = +1

Query: 49  MTTVPGQLIWEIVKRNNCFLVKEFGNGNAGVQFSKESNNLYNLNSYKFSGLANKKTVTIQ 228
           M+TVPGQLIWEIVK+NN FLVKEFG G   VQFS+E NNLYNLN++K+SGLAN+KTVT+Q
Sbjct: 1   MSTVPGQLIWEIVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANQKTVTVQ 60

Query: 229 PAGKDQGVLLATSRTKKQSKPASLLNKSIMKKEFHRMAKAVSNQVADNYYRPDLKKASLA 408
           PAGKDQ VLLAT++TKKQ+KPA+LL+KS+MKKEF RMAKAV NQVADNYYRPDLK+A+LA
Sbjct: 61  PAGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKRAALA 120

Query: 409 RLSAVNRSLKVAKSGVKKRNRQA 477
           RLSAVNRSL+VAKSGVKKRNRQA
Sbjct: 121 RLSAVNRSLRVAKSGVKKRNRQA 143


>ref|XP_002514169.1| 60S ribosomal protein L28, putative [Ricinus communis]
           gi|223546625|gb|EEF48123.1| 60S ribosomal protein L28,
           putative [Ricinus communis]
          Length = 144

 Score =  239 bits (611), Expect = 4e-61
 Identities = 121/143 (84%), Positives = 130/143 (90%)
 Frame = +1

Query: 49  MTTVPGQLIWEIVKRNNCFLVKEFGNGNAGVQFSKESNNLYNLNSYKFSGLANKKTVTIQ 228
           M TVPGQLIWEIVK NN FLVKEFG GNA VQFSKESNNLYNLNSYK SGLANKKTV+IQ
Sbjct: 1   MATVPGQLIWEIVKTNNSFLVKEFGRGNASVQFSKESNNLYNLNSYKHSGLANKKTVSIQ 60

Query: 229 PAGKDQGVLLATSRTKKQSKPASLLNKSIMKKEFHRMAKAVSNQVADNYYRPDLKKASLA 408
           P GKD  V+LAT++TKKQ+KPAS L+KS+M+KEF RMAKAVSNQV DNYYRPDLKKA+LA
Sbjct: 61  PGGKDLSVVLATTKTKKQNKPASSLHKSVMRKEFRRMAKAVSNQVGDNYYRPDLKKAALA 120

Query: 409 RLSAVNRSLKVAKSGVKKRNRQA 477
           RLSAV RSLKVAKSGVKKRNRQA
Sbjct: 121 RLSAVQRSLKVAKSGVKKRNRQA 143


Top