BLASTX nr result

ID: Cnidium21_contig00002136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002136
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD65459.1| putative ribosomal protein L28 [Gossypium hirsutum]    177   1e-43
gb|ABA46763.1| unknown [Solanum tuberosum]                            169   7e-41
ref|XP_004146830.1| PREDICTED: 60S ribosomal protein L28-2-like ...   167   9e-41
ref|XP_003543611.1| PREDICTED: 60S ribosomal protein L28-2 [Glyc...   166   2e-40
ref|NP_001238207.1| uncharacterized protein LOC100500189 [Glycin...   165   3e-40

>gb|ABD65459.1| putative ribosomal protein L28 [Gossypium hirsutum]
          Length = 150

 Score =  177 bits (448), Expect(2) = 1e-43
 Identities = 87/112 (77%), Positives = 93/112 (83%)
 Frame = +2

Query: 8   MTTVPGQLIWEIVKRNNCFLVKEFGNGNAGVRFSKEPXXXXXXXXXXXXGLANKKTVTIQ 187
           M TVPGQLIWE+VKRNNCFLVK+FG G AGVRFSKEP            GLANKKTVTIQ
Sbjct: 1   MATVPGQLIWEVVKRNNCFLVKQFGRGTAGVRFSKEPNNLYNVNSYKHSGLANKKTVTIQ 60

Query: 188 PAGKDQGVLLATTKSKKQNKPASVLNKSIMKKEFHRMAKAVSNQVADNYYRP 343
           PAGKDQ VLLATTKSKKQNKP+S+L+KS+MKKEF RMAKAV NQV DNYYRP
Sbjct: 61  PAGKDQSVLLATTKSKKQNKPSSLLHKSVMKKEFPRMAKAVKNQVTDNYYRP 112



 Score = 25.4 bits (54), Expect(2) = 1e-43
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +3

Query: 459 KSGVKKRNRQA 491
           KSGVKKRNRQA
Sbjct: 133 KSGVKKRNRQA 143


>gb|ABA46763.1| unknown [Solanum tuberosum]
          Length = 143

 Score =  169 bits (428), Expect(2) = 7e-41
 Identities = 83/112 (74%), Positives = 93/112 (83%)
 Frame = +2

Query: 8   MTTVPGQLIWEIVKRNNCFLVKEFGNGNAGVRFSKEPXXXXXXXXXXXXGLANKKTVTIQ 187
           MTTVPGQL+WEIVK+NN FLVKEFGNG+AGV FSKEP            GLANKKTVTIQ
Sbjct: 1   MTTVPGQLVWEIVKKNNSFLVKEFGNGSAGVVFSKEPNNLCNLHSYKHSGLANKKTVTIQ 60

Query: 188 PAGKDQGVLLATTKSKKQNKPASVLNKSIMKKEFHRMAKAVSNQVADNYYRP 343
           P GKD+ VLLAT+K+KKQN P+S+LNKS+MKKEF RMAKAV+NQV DNYYRP
Sbjct: 61  PEGKDKSVLLATSKTKKQNMPSSLLNKSVMKKEFRRMAKAVTNQVGDNYYRP 112



 Score = 23.9 bits (50), Expect(2) = 7e-41
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +3

Query: 459 KSGVKKRNRQA 491
           KSG KKRNRQA
Sbjct: 133 KSGAKKRNRQA 143


>ref|XP_004146830.1| PREDICTED: 60S ribosomal protein L28-2-like isoform 1 [Cucumis
           sativus] gi|449458191|ref|XP_004146831.1| PREDICTED: 60S
           ribosomal protein L28-2-like isoform 2 [Cucumis sativus]
           gi|449476678|ref|XP_004154804.1| PREDICTED: 60S
           ribosomal protein L28-2-like isoform 1 [Cucumis sativus]
           gi|449476681|ref|XP_004154805.1| PREDICTED: 60S
           ribosomal protein L28-2-like isoform 2 [Cucumis sativus]
          Length = 148

 Score =  167 bits (423), Expect(2) = 9e-41
 Identities = 84/112 (75%), Positives = 90/112 (80%)
 Frame = +2

Query: 8   MTTVPGQLIWEIVKRNNCFLVKEFGNGNAGVRFSKEPXXXXXXXXXXXXGLANKKTVTIQ 187
           M  VPGQLIWEIVKRNN FLVKEFG G AGV+FSKE             GLANKKTVTIQ
Sbjct: 1   MAAVPGQLIWEIVKRNNSFLVKEFGRGTAGVQFSKEANNLYNLNSYKHSGLANKKTVTIQ 60

Query: 188 PAGKDQGVLLATTKSKKQNKPASVLNKSIMKKEFHRMAKAVSNQVADNYYRP 343
           P GKDQ +LLATTKSKKQNKP+S L+KS+MKKEF RMAKAV+NQVADNYYRP
Sbjct: 61  PGGKDQSILLATTKSKKQNKPSSSLHKSLMKKEFRRMAKAVTNQVADNYYRP 112



 Score = 25.4 bits (54), Expect(2) = 9e-41
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +3

Query: 459 KSGVKKRNRQA 491
           KSGVKKRNRQA
Sbjct: 133 KSGVKKRNRQA 143


>ref|XP_003543611.1| PREDICTED: 60S ribosomal protein L28-2 [Glycine max]
          Length = 150

 Score =  166 bits (420), Expect(2) = 2e-40
 Identities = 81/112 (72%), Positives = 92/112 (82%)
 Frame = +2

Query: 8   MTTVPGQLIWEIVKRNNCFLVKEFGNGNAGVRFSKEPXXXXXXXXXXXXGLANKKTVTIQ 187
           M+TVPGQLIWEIVK+NN FLVKEFG G   V+FS+EP            GLAN+KTVT+Q
Sbjct: 1   MSTVPGQLIWEIVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANQKTVTVQ 60

Query: 188 PAGKDQGVLLATTKSKKQNKPASVLNKSIMKKEFHRMAKAVSNQVADNYYRP 343
           PAGKDQ VLLATTK+KKQNKPA++L+KS+MKKEF RMAKAV NQVADNYYRP
Sbjct: 61  PAGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVQNQVADNYYRP 112



 Score = 25.4 bits (54), Expect(2) = 2e-40
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +3

Query: 459 KSGVKKRNRQA 491
           KSGVKKRNRQA
Sbjct: 133 KSGVKKRNRQA 143


>ref|NP_001238207.1| uncharacterized protein LOC100500189 [Glycine max]
           gi|255629617|gb|ACU15156.1| unknown [Glycine max]
          Length = 150

 Score =  165 bits (418), Expect(2) = 3e-40
 Identities = 80/112 (71%), Positives = 90/112 (80%)
 Frame = +2

Query: 8   MTTVPGQLIWEIVKRNNCFLVKEFGNGNAGVRFSKEPXXXXXXXXXXXXGLANKKTVTIQ 187
           M TVPGQLIWE+VK+NN FLVKEFG G   V+FS+EP            GLANKKTVT+Q
Sbjct: 1   MATVPGQLIWEVVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTVQ 60

Query: 188 PAGKDQGVLLATTKSKKQNKPASVLNKSIMKKEFHRMAKAVSNQVADNYYRP 343
           P GKDQ VLLATTK+KKQNKPA++L+KS+MKKEF RMAKAV NQVADNYYRP
Sbjct: 61  PTGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVQNQVADNYYRP 112



 Score = 25.4 bits (54), Expect(2) = 3e-40
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +3

Query: 459 KSGVKKRNRQA 491
           KSGVKKRNRQA
Sbjct: 133 KSGVKKRNRQA 143


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