BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002034
         (1185 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE20168.1| ribosomal protein S4 [Panax ginseng]                  407   e-111
ref|XP_004163526.1| PREDICTED: 40S ribosomal protein S4-like [Cu...   395   e-108
sp|O22424.1|RS4_MAIZE RecName: Full=40S ribosomal protein S4 gi|...   395   e-107
ref|XP_002463552.1| hypothetical protein SORBIDRAFT_01g001850 [S...   395   e-107
ref|XP_004150395.1| PREDICTED: 40S ribosomal protein S4-like [Cu...   395   e-107

>dbj|BAE20168.1| ribosomal protein S4 [Panax ginseng]
          Length = 264

 Score =  407 bits (1047), Expect = e-111
 Identities = 206/251 (82%), Positives = 212/251 (84%), Gaps = 3/251 (1%)
 Frame = +3

Query: 147 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYRE 326
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN+LKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 327 VQSILMQRHVLVDGKVRTDKTYPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 506
           VQSILMQRHVLVDGKVRTDKTYPAG                                   
Sbjct: 61  VQSILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 507 ---CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 677
              CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLE+NKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEANKIADFIKFDVGNV 180

Query: 678 VMVTGGRNTGRVGILKNREKHKGSFETVHIQDNLGHEFATRLSNVFTIGKGSKPWVSLPK 857
           VMVTGGRNTGRVG++KNREKHKGSFETVHIQD+LGHEFATRL NVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSFETVHIQDSLGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 858 GKGIKLTIIEE 890
           GKGIKLTIIEE
Sbjct: 241 GKGIKLTIIEE 251


>ref|XP_004163526.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
          Length = 264

 Score =  395 bits (1016), Expect = e-108
 Identities = 200/251 (79%), Positives = 207/251 (82%), Gaps = 3/251 (1%)
 Frame = +3

Query: 147 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYRE 326
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN+LKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 327 VQSILMQRHVLVDGKVRTDKTYPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 506
           V +ILMQRHVLVD KVRTDKTYPAG                                   
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 507 ---CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 677
              CKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 678 VMVTGGRNTGRVGILKNREKHKGSFETVHIQDNLGHEFATRLSNVFTIGKGSKPWVSLPK 857
           VMVTGGRN GRVG++KNREKHKGSFET+HIQD  GHEFATRL NVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 858 GKGIKLTIIEE 890
           GKGIKLTIIEE
Sbjct: 241 GKGIKLTIIEE 251


>sp|O22424.1|RS4_MAIZE RecName: Full=40S ribosomal protein S4 gi|2331301|gb|AAB66899.1|
           ribosomal protein S4 type I [Zea mays]
           gi|194698488|gb|ACF83328.1| unknown [Zea mays]
           gi|195618184|gb|ACG30922.1| 40S ribosomal protein S4
           [Zea mays] gi|195625650|gb|ACG34655.1| 40S ribosomal
           protein S4 [Zea mays] gi|413932477|gb|AFW67028.1|
           putative ribosomal protein S4 (RPS4A) family protein
           [Zea mays]
          Length = 265

 Score =  395 bits (1015), Expect = e-107
 Identities = 195/251 (77%), Positives = 210/251 (83%), Gaps = 3/251 (1%)
 Frame = +3

Query: 147 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYRE 326
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILI+RN+LKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60

Query: 327 VQSILMQRHVLVDGKVRTDKTYPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 506
           V SILMQRHVLVDGKVRTDKTYPAG                                   
Sbjct: 61  VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAK 120

Query: 507 ---CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 677
              CKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE+NKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 180

Query: 678 VMVTGGRNTGRVGILKNREKHKGSFETVHIQDNLGHEFATRLSNVFTIGKGSKPWVSLPK 857
           VMVTGGRNTGRVG++KNREKHKGSFET+H++D+LGH+FATR+ NVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPK 240

Query: 858 GKGIKLTIIEE 890
           GKGIKL+IIEE
Sbjct: 241 GKGIKLSIIEE 251


>ref|XP_002463552.1| hypothetical protein SORBIDRAFT_01g001850 [Sorghum bicolor]
           gi|241917406|gb|EER90550.1| hypothetical protein
           SORBIDRAFT_01g001850 [Sorghum bicolor]
          Length = 264

 Score =  395 bits (1015), Expect = e-107
 Identities = 195/251 (77%), Positives = 210/251 (83%), Gaps = 3/251 (1%)
 Frame = +3

Query: 147 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYRE 326
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILI+RN+LKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60

Query: 327 VQSILMQRHVLVDGKVRTDKTYPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 506
           V SILMQRHVLVDGKVRTDKTYPAG                                   
Sbjct: 61  VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAK 120

Query: 507 ---CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 677
              CKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE+NKI DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 180

Query: 678 VMVTGGRNTGRVGILKNREKHKGSFETVHIQDNLGHEFATRLSNVFTIGKGSKPWVSLPK 857
           VMVTGGRNTGRVG++KNREKHKGSFET+H++D+LGH+FATR+ NVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPK 240

Query: 858 GKGIKLTIIEE 890
           GKGIKL+IIEE
Sbjct: 241 GKGIKLSIIEE 251


>ref|XP_004150395.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
           gi|449496881|ref|XP_004160252.1| PREDICTED: 40S
           ribosomal protein S4-like [Cucumis sativus]
          Length = 264

 Score =  395 bits (1014), Expect = e-107
 Identities = 199/251 (79%), Positives = 208/251 (82%), Gaps = 3/251 (1%)
 Frame = +3

Query: 147 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNKLKYALTYRE 326
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRN+LKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 327 VQSILMQRHVLVDGKVRTDKTYPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 506
           V +ILMQRHVLVDGKVRTDKT+PAG                                   
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 507 ---CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 677
              CKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 678 VMVTGGRNTGRVGILKNREKHKGSFETVHIQDNLGHEFATRLSNVFTIGKGSKPWVSLPK 857
           VMVTGGRN GRVG++KNREKHKGSFET+HIQD  GHEFATRL NVFTIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 858 GKGIKLTIIEE 890
           GKGIKL+IIEE
Sbjct: 241 GKGIKLSIIEE 251