BLASTX nr result

ID: Cnidium21_contig00002017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002017
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM62133.1| phloem protein 2-2 [Apium graveolens Dulce Group]       66   8e-09
ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|2...    57   5e-06

>gb|AAM62133.1| phloem protein 2-2 [Apium graveolens Dulce Group]
          Length = 179

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 17/168 (10%)
 Frame = -2

Query: 797 MAQVAKIDVAQAVKMGVLELPAVADLKQQMDIVVPAKDLVY---ANPQTWKFHG------ 645
           MAQV + D+      G     A+ D K     V+ AK+L     ++P+ WK+        
Sbjct: 1   MAQVQRDDIVSLWTQG---FQALKD-KSSCAAVLTAKELSIVWGSDPRYWKWVSKTSPVN 56

Query: 644 ----EIAEFLGGGNPQVHGTSGVKNLDKGVTYEVYYYLAMN-NHQVSSPVKLTLELPFGP 480
               + AE +     Q+ GT   +NL+KGV Y VY+ + +N N  ++ PV L L  P G 
Sbjct: 57  FEALDAAELIEVCWLQIDGTYNARNLNKGVKYGVYFVVELNSNPCMNGPVTLKLTRPNGS 116

Query: 479 KQERTETITVNP-YEWKAVSVGKFVNVFLTGD--IKFTFSGVTGDTWK 345
            +E  E +   P  +W  + VG+F N     D  +KF+ +G  G TWK
Sbjct: 117 PEEHKEDLQTKPRNKWVGLKVGEFTNTASGCDNTVKFSMNGCDGTTWK 164


>ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|222875189|gb|EEF12320.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
 Frame = -2

Query: 644 EIAEFLGGGNPQVHGTSGVKNLDKGVTYEVYYYLAMNN--HQVSSPVKLTLELPFGPKQE 471
           ++AE L     +++G    K L  G+ YEV + + + +  +    PV ++L LP G KQE
Sbjct: 163 DVAELLDVCWLEIYGKFNTKMLSPGILYEVVFVIKLKDPAYGWGVPVNVSLVLPNGYKQE 222

Query: 470 RTETITVNPYE-WKAVSVGKFV-NVFLTGDIKFTFSGVTGDTWK-GLCLSCVLIRP 312
           R E +   P E W  V VG+F+ +    G+I+F      G  WK GL +  + IRP
Sbjct: 223 RKEKLQTKPREQWIEVPVGEFITSPENVGEIQFGMHEYDGGEWKRGLVIKGIAIRP 278


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