BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002002
         (1805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g...   515   e-143
ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g...   509   e-142
ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus ...   508   e-141
emb|CBI35182.3| unnamed protein product [Vitis vinifera]              494   e-137
ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [...   494   e-137

>ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 528

 Score =  515 bits (1326), Expect = e-143
 Identities = 285/515 (55%), Positives = 347/515 (67%), Gaps = 27/515 (5%)
 Frame = +1

Query: 1    MGGIPEMGGVPE-------MGGVPEMGGIPEM-------GGVTEMVGVPK---LGDVPEM 129
            +G +PE    P+       +G V +  G P +       G + E    P+   +G   ++
Sbjct: 11   VGYVPEDPNFPQNHSDEHDVGTVIDSSGFPHLLPDEDDAGNLMEDANFPENDFVGHEHDV 70

Query: 130  GGVPEMDSMPAMGSMPETGGTTEAGGIPDDSNPTEVHESENDQKSDNPVNENEKKWPGWP 309
            GG+      P    + E  G   AG +P+D +      SE D K +       KKWPGWP
Sbjct: 71   GGLAGDADSPPEEHVEEVHG---AGDVPEDFDSLPKQGSEIDSKGNEI-----KKWPGWP 122

Query: 310  GENVFRLLVPVQKVGSIIGRKGEYIKKTCEETKARIKILDGPPGTNERTVMISAKELPDV 489
            GENVFR+LVPVQKVGSIIGRKGE+IKK  EETKARIKILDGPPG +ER VM+SAKE PD 
Sbjct: 123  GENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDC 182

Query: 490  PIPPAVDGLLKVHKRVVDVDADPAHAQPGAGGTVCTRMLVAATQGGSLIGKQGATIKSIQ 669
            PIPPAVDGLL+VHK+V++VD D A +   AG +V TR+LVA TQ GSLIGKQG+TIKSIQ
Sbjct: 183  PIPPAVDGLLRVHKQVINVDRDLADSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQ 242

Query: 670  DASGCIIRVLGRENLPVFALPDDNVVEVQGEAAGVHKAIELIANHLRKFLVDRSVIGIFE 849
            D SGC IRVLG ENLP+FAL DD++VE+QGE+AGVHKA+ELIA HLRKFLVDRS++G+FE
Sbjct: 243  DGSGCTIRVLGSENLPIFALRDDSIVEIQGESAGVHKAVELIAVHLRKFLVDRSIVGVFE 302

Query: 850  MEMQSPNTRGNQDLPPPQSWG--PQGFGINAVGGGGHG--FPSNPQYAPPPRQFDNYYPP 1017
             +MQ  + R NQ+LPP Q+WG  PQGF   A GGGG G  F  N QY PP   +D+YYPP
Sbjct: 303  TQMQMSDVRVNQNLPPHQNWGPPPQGFPAPAGGGGGGGPAFAPNHQYMPPSHHYDSYYPP 362

Query: 1018 ADMPPIEKQ-PRGGASAYGRDMSMGT-QPNMQPHQSMVTKVSQNMQIPLTYADAVIGTSG 1191
             ++PP++K   +G   AY RD SMG    + QP QS+VTKV+Q+MQIPLTYADAVIG SG
Sbjct: 363  TELPPMDKHLHQGPPPAYARDASMGIHSSSAQPQQSVVTKVTQHMQIPLTYADAVIGASG 422

Query: 1192 ASISYIRRASGATIAIQETRGVPDEMTVEINGSASQVQTAQQLIQNFI-XXXXXXXXXXX 1368
             +ISYIRRASGA+I IQETRGVP EMTVEI+G++SQ+Q AQQL+QNF+            
Sbjct: 423  TNISYIRRASGASITIQETRGVPGEMTVEISGTSSQIQAAQQLVQNFMAEAASATQDPMG 482

Query: 1369 XXXXXXYNPYPNNGPAYLSQPPDG---TGHAPPGD 1464
                  Y+ YP   P Y   P      TGHAP  D
Sbjct: 483  GSVSQGYSAYPTTAPVYAPPPTSAGGHTGHAPSAD 517


>ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 529

 Score =  509 bits (1311), Expect = e-142
 Identities = 283/515 (54%), Positives = 344/515 (66%), Gaps = 27/515 (5%)
 Frame = +1

Query: 1    MGGIPEMGGVPE-------MGGVPEMGGIPEM-------GGVTEMVGVPKL---GDVPEM 129
            +G +PE    P+       +G V +  G P +       G + E    P+    G   ++
Sbjct: 11   VGYVPEDPNFPQNHSDEHDVGTVIDSSGFPHLLPDEDDAGNLVEDANFPENHFDGHEHDV 70

Query: 130  GGVPEMDSMPAMGSMPETGGTTEAGGIPDDSNPTEVHESENDQKSDNPVNENEKKWPGWP 309
            GG P     P      E G    AG +P+D +     ESE D K +       KKWPGWP
Sbjct: 71   GGFPGDTDSPQKEEHVEEGHG--AGDVPEDFDSLLKQESEIDSKGNEI-----KKWPGWP 123

Query: 310  GENVFRLLVPVQKVGSIIGRKGEYIKKTCEETKARIKILDGPPGTNERTVMISAKELPDV 489
            GENVFR+LVPVQKVGSIIGRKGE+IKK  EETKARIKILDGPPG +ER VM+SAKE PD 
Sbjct: 124  GENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDR 183

Query: 490  PIPPAVDGLLKVHKRVVDVDADPAHAQPGAGGTVCTRMLVAATQGGSLIGKQGATIKSIQ 669
            PIPPA+DGLL+VHK+V++VD D   +   AG +V TR+LVA TQ GSLIGKQG+TIKSIQ
Sbjct: 184  PIPPAIDGLLRVHKQVINVDRDLVDSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQ 243

Query: 670  DASGCIIRVLGRENLPVFALPDDNVVEVQGEAAGVHKAIELIANHLRKFLVDRSVIGIFE 849
            D SGC IRVLG ENLPVFAL DD++VE+QGE+AGVHKA+ELIA HLRKFLVDRS++G+FE
Sbjct: 244  DGSGCTIRVLGSENLPVFALRDDSIVEIQGESAGVHKAVELIAVHLRKFLVDRSIVGVFE 303

Query: 850  MEMQSPNTRGNQDLPPPQSWG--PQGFGINA-VGGGGHGFPSNPQYAPPPRQFDNYYPPA 1020
             +MQ P+ R NQ++PP Q+WG  PQGF   A  GGGG  F  N QY PP   +D+YYPP 
Sbjct: 304  TQMQRPDVRVNQNVPPHQNWGPPPQGFPAPAGGGGGGPAFAPNHQYMPPSHHYDSYYPPT 363

Query: 1021 DMPPIEKQ-PRGGASAYGRDMSMGT-QPNMQPHQSMVTKVSQNMQIPLTYADAVIGTSGA 1194
            ++PP++K   +G   AY +D SMG    +  P QS+VTKV+Q+MQIPLTYADAVIG SG 
Sbjct: 364  ELPPMDKHLHQGPPPAYAKDASMGIHSSSAPPQQSVVTKVTQHMQIPLTYADAVIGASGT 423

Query: 1195 SISYIRRASGATIAIQETRGVPDEMTVEINGSASQVQTAQQLIQNFI-XXXXXXXXXXXX 1371
            +ISYIRRASGA+I IQETRGVP EMTVEI+G++SQ+Q AQQL+QNF+             
Sbjct: 424  NISYIRRASGASITIQETRGVPGEMTVEISGTSSQIQAAQQLVQNFMAEAASATQDPMGG 483

Query: 1372 XXXXXYNPYPNNGPAYLSQPPDG----TGHAPPGD 1464
                 Y+ YP   P Y      G    TGHAP  D
Sbjct: 484  SVSQGYSAYPTTAPVYAPPTSAGGGGHTGHAPSAD 518


>ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
            gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein,
            putative [Ricinus communis]
          Length = 548

 Score =  508 bits (1307), Expect = e-141
 Identities = 266/418 (63%), Positives = 308/418 (73%), Gaps = 6/418 (1%)
 Frame = +1

Query: 217  DSNPTEVHESENDQKSDNPVNENEKKWPGWPGENVFRLLVPVQKVGSIIGRKGEYIKKTC 396
            D  P      E    +D      EKKWPGWPGE+VFR+LVP QKVGSIIGRKGE+IKK  
Sbjct: 119  DQVPENYQAQEKGHDADTVSGGIEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIV 178

Query: 397  EETKARIKILDGPPGTNERTVMISAKELPDVPIPPAVDGLLKVHKRVVD-VDADPAHAQP 573
            EET+ARIKILDGPPGT ER VM+SAKE PD  +PPA+DGLL+VHKR+VD +D D +HA  
Sbjct: 179  EETRARIKILDGPPGTTERAVMVSAKEEPDSALPPAMDGLLRVHKRIVDGLDGDSSHASS 238

Query: 574  GAGGTVCTRMLVAATQGGSLIGKQGATIKSIQDASGCIIRVLGRENLPVFALPDDNVVEV 753
            G G  V TR+LV A+Q GSLIGKQG T+KSIQ+AS C++RVLG E+LPVFAL DD VVEV
Sbjct: 239  GTGTKVSTRLLVPASQAGSLIGKQGGTVKSIQEASSCVVRVLGAEDLPVFALQDDRVVEV 298

Query: 754  QGEAAGVHKAIELIANHLRKFLVDRSVIGIFEMEMQSPNTRGNQDLPPPQSWG-PQGFGI 930
             G+AAGVHKA+ELIA+HLRKFLVDRS+I +FEM MQ  N    + +PP QSWG PQG   
Sbjct: 299  LGDAAGVHKAVELIASHLRKFLVDRSIIPLFEMHMQMQNPPHMEHMPPHQSWGPPQGIPP 358

Query: 931  NAVGGGGHGFPSNPQYAPPPRQFDNYYPPADM-PPIEKQPRGGASAYGRDMSMGT--QPN 1101
            NA GG G+G   NPQY PPPRQ +NYYPPAD+ PP+EKQP  G SAYGR+  MG     N
Sbjct: 359  NAGGGPGYG---NPQYMPPPRQIENYYPPADLPPPMEKQPHQGISAYGREAPMGVHGSSN 415

Query: 1102 MQPHQSMVTKVSQNMQIPLTYADAVIGTSGASISYIRRASGATIAIQETRGVPDEMTVEI 1281
             Q   SM+T+++Q MQIPL+YADAVIGT+G SISYIRRASGAT+ IQETRGVP EMTVEI
Sbjct: 416  SQAAPSMITQITQQMQIPLSYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEI 475

Query: 1282 NGSASQVQTAQQLIQNFI-XXXXXXXXXXXXXXXXXYNPYPNNGPAYLSQPPDGTGHA 1452
            +G+ASQVQTAQQLIQNF+                  YNPY  +G  Y S PP   GHA
Sbjct: 476  SGTASQVQTAQQLIQNFMAEAGAPTQAQTGGSTDQGYNPYAAHGSVYAS-PPSNPGHA 532


>emb|CBI35182.3| unnamed protein product [Vitis vinifera]
          Length = 511

 Score =  494 bits (1271), Expect = e-137
 Identities = 265/436 (60%), Positives = 315/436 (72%), Gaps = 6/436 (1%)
 Frame = +1

Query: 163  MGSMPETGGTTEAGGIPDDSNPTEVHESENDQKSDNPVNENEKKWPGWPGENVFRLLVPV 342
            M  + E  G  +   +P+DS P    + +  +  D+ +   EK+WPGWPGE+VFR+LVP 
Sbjct: 70   MAEVEENFGEPDMDQLPEDSQP----QQKRGRDDDSAIGGGEKRWPGWPGESVFRMLVPA 125

Query: 343  QKVGSIIGRKGEYIKKTCEETKARIKILDGPPGTNERTVMISAKELPDVPIPPAVDGLLK 522
            QKVGSIIGRKGE+IKK  EET+ARIKILDGPPGT ER VM+SAKE PD  +PPA+DGLLK
Sbjct: 126  QKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSSLPPAMDGLLK 185

Query: 523  VHKRVVD-VDADPAHAQPGAGGTVCTRMLVAATQGGSLIGKQGATIKSIQDASGCIIRVL 699
            VHKR+VD ++ D +H  P  GG V TR+LVAA+Q GSLIGKQG T+KSIQ+AS CI+RVL
Sbjct: 186  VHKRIVDGLEGDSSHMPP--GGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVL 243

Query: 700  GRENLPVFALPDDNVVEVQGEAAGVHKAIELIANHLRKFLVDRSVIGIFEMEMQSPNTRG 879
            G E+LP+FAL DD VVEV GE  GVHKA+ELIA+HLRKFLVDRSVI +FEM+MQ  N   
Sbjct: 244  GAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRSVIPLFEMQMQMSNP-P 302

Query: 880  NQDLPPPQSWG-PQGFGINAVGGGGHGFPSNPQYAPPPRQFDNYYPPADM-PPIEKQPRG 1053
             + +PP Q WG PQG   NA   GG GF  NP Y PPPRQ D+YYPP ++ PP+EKQP  
Sbjct: 303  IEHMPPHQPWGPPQGLPPNA--SGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQ 360

Query: 1054 GASAYGRDMSMG--TQPNMQPHQSMVTKVSQNMQIPLTYADAVIGTSGASISYIRRASGA 1227
            G SAYGR++ MG     + QP  SM+T+V+Q MQIPL+YADAVIGT+GASISYIRRASGA
Sbjct: 361  GISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGA 420

Query: 1228 TIAIQETRGVPDEMTVEINGSASQVQTAQQLIQNFI-XXXXXXXXXXXXXXXXXYNPYPN 1404
            T+ IQETRGVP EMTVEING+ASQVQ AQQLIQNF+                  YN Y  
Sbjct: 421  TVTIQETRGVPGEMTVEINGTASQVQAAQQLIQNFMAEAAAPAQAQAGGSADQGYNSYAA 480

Query: 1405 NGPAYLSQPPDGTGHA 1452
            +G  Y S P     HA
Sbjct: 481  HGSMYAS-PASNPAHA 495


>ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
          Length = 442

 Score =  494 bits (1271), Expect = e-137
 Identities = 265/436 (60%), Positives = 315/436 (72%), Gaps = 6/436 (1%)
 Frame = +1

Query: 163  MGSMPETGGTTEAGGIPDDSNPTEVHESENDQKSDNPVNENEKKWPGWPGENVFRLLVPV 342
            M  + E  G  +   +P+DS P    + +  +  D+ +   EK+WPGWPGE+VFR+LVP 
Sbjct: 1    MAEVEENFGEPDMDQLPEDSQP----QQKRGRDDDSAIGGGEKRWPGWPGESVFRMLVPA 56

Query: 343  QKVGSIIGRKGEYIKKTCEETKARIKILDGPPGTNERTVMISAKELPDVPIPPAVDGLLK 522
            QKVGSIIGRKGE+IKK  EET+ARIKILDGPPGT ER VM+SAKE PD  +PPA+DGLLK
Sbjct: 57   QKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSSLPPAMDGLLK 116

Query: 523  VHKRVVD-VDADPAHAQPGAGGTVCTRMLVAATQGGSLIGKQGATIKSIQDASGCIIRVL 699
            VHKR+VD ++ D +H  P  GG V TR+LVAA+Q GSLIGKQG T+KSIQ+AS CI+RVL
Sbjct: 117  VHKRIVDGLEGDSSHMPP--GGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVL 174

Query: 700  GRENLPVFALPDDNVVEVQGEAAGVHKAIELIANHLRKFLVDRSVIGIFEMEMQSPNTRG 879
            G E+LP+FAL DD VVEV GE  GVHKA+ELIA+HLRKFLVDRSVI +FEM+MQ  N   
Sbjct: 175  GAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRSVIPLFEMQMQMSNP-P 233

Query: 880  NQDLPPPQSWG-PQGFGINAVGGGGHGFPSNPQYAPPPRQFDNYYPPADM-PPIEKQPRG 1053
             + +PP Q WG PQG   NA   GG GF  NP Y PPPRQ D+YYPP ++ PP+EKQP  
Sbjct: 234  IEHMPPHQPWGPPQGLPPNA--SGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQ 291

Query: 1054 GASAYGRDMSMG--TQPNMQPHQSMVTKVSQNMQIPLTYADAVIGTSGASISYIRRASGA 1227
            G SAYGR++ MG     + QP  SM+T+V+Q MQIPL+YADAVIGT+GASISYIRRASGA
Sbjct: 292  GISAYGREVPMGGHAPSSAQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGA 351

Query: 1228 TIAIQETRGVPDEMTVEINGSASQVQTAQQLIQNFI-XXXXXXXXXXXXXXXXXYNPYPN 1404
            T+ IQETRGVP EMTVEING+ASQVQ AQQLIQNF+                  YN Y  
Sbjct: 352  TVTIQETRGVPGEMTVEINGTASQVQAAQQLIQNFMAEAAAPAQAQAGGSADQGYNSYAA 411

Query: 1405 NGPAYLSQPPDGTGHA 1452
            +G  Y S P     HA
Sbjct: 412  HGSMYAS-PASNPAHA 426