BLASTX nr result

ID: Cnidium21_contig00001969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001969
         (1305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277761.1| PREDICTED: choline transporter-like protein ...   384   e-106
ref|XP_004158379.1| PREDICTED: choline transporter-like protein ...   370   e-103
ref|XP_004147033.1| PREDICTED: choline transporter-like protein ...   368   e-103
ref|XP_002313719.1| predicted protein [Populus trichocarpa] gi|2...   369   e-101
ref|XP_003540850.1| PREDICTED: choline transporter-like protein ...   371   e-100

>ref|XP_002277761.1| PREDICTED: choline transporter-like protein 3 [Vitis vinifera]
            gi|297744628|emb|CBI37890.3| unnamed protein product
            [Vitis vinifera]
          Length = 550

 Score =  384 bits (985), Expect(2) = e-106
 Identities = 205/335 (61%), Positives = 234/335 (69%), Gaps = 2/335 (0%)
 Frame = -1

Query: 1233 NWHRIELTVSIIGVSANALSENXXXXXXXXXXXXXLFVYFVPIVVFLVFARLNGKIVPRE 1054
            NWHRIELTV IIG+++++LS N             L +Y+ PIVVFLVFARLNGKIVPRE
Sbjct: 223  NWHRIELTVDIIGIASHSLSRNLGLFVVLPCLTFSLVIYYAPIVVFLVFARLNGKIVPRE 282

Query: 1053 KDGEYYCAWKQDGWVPAYYVLAILTMLWSAAAMVEAQVYVISGTIAQWYFSKD-EXXXXX 877
              GEYYC WKQD WVPAYY LAILTMLWSA AMVE QVYVISGTIAQWYF+KD +     
Sbjct: 283  SSGEYYCVWKQDSWVPAYYTLAILTMLWSATAMVELQVYVISGTIAQWYFAKDHDSTPKR 342

Query: 876  XXXXXXRNAFGPSFGTICFSGLLIFVVRLVRSSVDNAKQ-DLPGIFNLILRCCVNAFMAA 700
                  RNA GPS GT+C SGLLI  V +VR++VD+A+Q +L GI NL+LRCCVNA + A
Sbjct: 343  SIRSSLRNALGPSSGTVCLSGLLICAVHVVRAAVDSARQEELQGIVNLMLRCCVNALLTA 402

Query: 699  FDFLNKFAINFAAITGEAYCTSARMTYELLSRNLLSAVFVETVSTRILGGISFVFAAIYG 520
             DFLNKF INFAAITGEAYCTSARMTYELL RNLLSAVFVETVS+RILGGI FVF+AIY 
Sbjct: 403  IDFLNKFTINFAAITGEAYCTSARMTYELLKRNLLSAVFVETVSSRILGGIVFVFSAIYA 462

Query: 519  IVVCVILRGVIGIGVDSYFIAXXXXXXXXXXXXXXXXXLDNVIETVXXFIAXXXXXXXXX 340
            IV C IL+ V  +G D+YF+A                    +I  +  F+          
Sbjct: 463  IVACAILKAVSNLGADAYFVAALAWVL--------------LILVLGFFV---------- 498

Query: 339  XXXXXXXXLDNVIETVYVCYAIDRDTGDVCKQEVH 235
                    LDNVI+TVYVCYAIDRD G+VCKQEVH
Sbjct: 499  ------HVLDNVIDTVYVCYAIDRDRGEVCKQEVH 527



 Score = 30.8 bits (68), Expect(2) = e-106
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -2

Query: 134 VYVNLPISRNHRSHIA 87
           VYVNLPI RNHRS +A
Sbjct: 529 VYVNLPIRRNHRSSLA 544


>ref|XP_004158379.1| PREDICTED: choline transporter-like protein 1-like [Cucumis sativus]
          Length = 556

 Score =  370 bits (949), Expect(2) = e-103
 Identities = 197/337 (58%), Positives = 227/337 (67%), Gaps = 4/337 (1%)
 Frame = -1

Query: 1233 NWHRIELTVSIIGVSANALSENXXXXXXXXXXXXXLFVYFVPIVVFLVFARLNGKIVPRE 1054
            NWHRIELT+ IIGV+++ALS N             L +Y+ PIV+FLVFAR+NGKI+P  
Sbjct: 227  NWHRIELTIQIIGVASDALSMNLGLFVAIPSMTLGLLIYYAPIVLFLVFARMNGKILPHH 286

Query: 1053 --KDGEYYCAWKQDGWVPAYYVLAILTMLWSAAAMVEAQVYVISGTIAQWYFSKDEXXXX 880
                GEY C WK+D WVPAYY LAILTMLWS A MVE QVYVISGTI+QWYFSK+E    
Sbjct: 287  HVSSGEYSCVWKEDKWVPAYYALAILTMLWSGAVMVEGQVYVISGTISQWYFSKEEDDTP 346

Query: 879  XXXXXXXR-NAFGPSFGTICFSGLLIFVVRLVRSSVDNAKQ-DLPGIFNLILRCCVNAFM 706
                     NAFGPS GTIC SGLLI VVR+VR+ VD+A+Q D+PG+FNLILRCCVN F+
Sbjct: 347  RRSIRKSLRNAFGPSAGTICLSGLLILVVRVVRAVVDSARQEDIPGMFNLILRCCVNTFL 406

Query: 705  AAFDFLNKFAINFAAITGEAYCTSARMTYELLSRNLLSAVFVETVSTRILGGISFVFAAI 526
            AA D+LNKFAI FAA+TGEAYCTSARMTYELL RNLLS VFVET+STR+L GI+FV +AI
Sbjct: 407  AAVDYLNKFAITFAAVTGEAYCTSARMTYELLKRNLLSTVFVETISTRLLAGIAFVLSAI 466

Query: 525  YGIVVCVILRGVIGIGVDSYFIAXXXXXXXXXXXXXXXXXLDNVIETVXXFIAXXXXXXX 346
            Y IV C IL  V  +G+D+YFIA                 LDN                 
Sbjct: 467  YAIVACAILHAVSHLGIDTYFIAVAAWLLLIVVLTFFIHVLDN----------------- 509

Query: 345  XXXXXXXXXXLDNVIETVYVCYAIDRDTGDVCKQEVH 235
                         VIETVYVCYAIDRD G+VCKQ+VH
Sbjct: 510  -------------VIETVYVCYAIDRDRGEVCKQDVH 533



 Score = 33.5 bits (75), Expect(2) = e-103
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = -2

Query: 134 VYVNLPISRNHRSHIARTPLV 72
           VYV+LPISRNHRS +A T L+
Sbjct: 535 VYVHLPISRNHRSSMATTSLL 555


>ref|XP_004147033.1| PREDICTED: choline transporter-like protein 1-like [Cucumis sativus]
          Length = 556

 Score =  368 bits (945), Expect(2) = e-103
 Identities = 196/337 (58%), Positives = 227/337 (67%), Gaps = 4/337 (1%)
 Frame = -1

Query: 1233 NWHRIELTVSIIGVSANALSENXXXXXXXXXXXXXLFVYFVPIVVFLVFARLNGKIVPRE 1054
            NWHRIELT+ IIGV+++ALS N             L +Y+ PIV+FLVFAR+NGKI+P  
Sbjct: 227  NWHRIELTIQIIGVASDALSMNLGLFVAIPSMTLGLLIYYAPIVLFLVFARMNGKILPHH 286

Query: 1053 --KDGEYYCAWKQDGWVPAYYVLAILTMLWSAAAMVEAQVYVISGTIAQWYFSKDEXXXX 880
                GEY C WK+D WVPAYY LAILTMLWS A MVE QVYVISGTI+QWYFSK+E    
Sbjct: 287  HVSSGEYSCVWKEDKWVPAYYALAILTMLWSGAVMVEGQVYVISGTISQWYFSKEEDDTP 346

Query: 879  XXXXXXXR-NAFGPSFGTICFSGLLIFVVRLVRSSVDNAKQ-DLPGIFNLILRCCVNAFM 706
                     NAFGPS GTIC SGLLI VVR+VR+ VD+A+Q D+PG+FNLILRCCVN F+
Sbjct: 347  RRSIRKSLRNAFGPSAGTICLSGLLILVVRVVRAVVDSARQEDIPGMFNLILRCCVNTFL 406

Query: 705  AAFDFLNKFAINFAAITGEAYCTSARMTYELLSRNLLSAVFVETVSTRILGGISFVFAAI 526
            AA D+LNKFAI FAA+TGEAYC+SARMTYELL RNLLS VFVET+STR+L GI+FV +AI
Sbjct: 407  AAVDYLNKFAITFAAVTGEAYCSSARMTYELLKRNLLSTVFVETISTRLLAGIAFVLSAI 466

Query: 525  YGIVVCVILRGVIGIGVDSYFIAXXXXXXXXXXXXXXXXXLDNVIETVXXFIAXXXXXXX 346
            Y IV C IL  V  +G+D+YFIA                 LDN                 
Sbjct: 467  YAIVACAILHAVSHLGIDTYFIAVAAWLLLIVVLTFFIHVLDN----------------- 509

Query: 345  XXXXXXXXXXLDNVIETVYVCYAIDRDTGDVCKQEVH 235
                         VIETVYVCYAIDRD G+VCKQ+VH
Sbjct: 510  -------------VIETVYVCYAIDRDRGEVCKQDVH 533



 Score = 33.5 bits (75), Expect(2) = e-103
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = -2

Query: 134 VYVNLPISRNHRSHIARTPLV 72
           VYV+LPISRNHRS +A T L+
Sbjct: 535 VYVHLPISRNHRSSMATTSLL 555


>ref|XP_002313719.1| predicted protein [Populus trichocarpa] gi|222850127|gb|EEE87674.1|
            predicted protein [Populus trichocarpa]
          Length = 548

 Score =  369 bits (946), Expect(2) = e-101
 Identities = 197/334 (58%), Positives = 226/334 (67%), Gaps = 1/334 (0%)
 Frame = -1

Query: 1233 NWHRIELTVSIIGVSANALSENXXXXXXXXXXXXXLFVYFVPIVVFLVFARLNGKIVPRE 1054
            NWHRIELTV IIGV+++ALS+N             L VY+ PIVVFLVFARLNGKIVP+E
Sbjct: 222  NWHRIELTVKIIGVASDALSKNLGLFVVIPLLTLGLVVYYAPIVVFLVFARLNGKIVPKE 281

Query: 1053 KDGEYYCAWKQDGWVPAYYVLAILTMLWSAAAMVEAQVYVISGTIAQWYFSKDEXXXXXX 874
             +GEY C WKQD WVPAYY LAILTMLWS   MVEAQVYVISGT+AQWYF+K++      
Sbjct: 282  SNGEYRCVWKQDSWVPAYYTLAILTMLWSLTIMVEAQVYVISGTVAQWYFTKEDAKPRRS 341

Query: 873  XXXXXRNAFGPSFGTICFSGLLIFVVRLVRSSVDNAKQ-DLPGIFNLILRCCVNAFMAAF 697
                 R+AFGPS GT+C SGLLI VVR VR+ VD+A+Q D+PG+ NL+LRCCV A ++A 
Sbjct: 342  IRSSLRHAFGPSSGTVCLSGLLICVVRFVRAVVDSARQEDVPGMVNLVLRCCVKALLSAV 401

Query: 696  DFLNKFAINFAAITGEAYCTSARMTYELLSRNLLSAVFVETVSTRILGGISFVFAAIYGI 517
            DFLNKF INF AITGE YCTSARMTYELL RNLLSAVFVETVSTR+L GI+FV +AIY I
Sbjct: 402  DFLNKFTINFVAITGEGYCTSARMTYELLKRNLLSAVFVETVSTRLLAGITFVLSAIYAI 461

Query: 516  VVCVILRGVIGIGVDSYFIAXXXXXXXXXXXXXXXXXLDNVIETVXXFIAXXXXXXXXXX 337
            VVC IL+G   +GV SY +A                 LDN                    
Sbjct: 462  VVCAILKGASSMGVYSYVVAVLAWALLIIVLGFFVHVLDN-------------------- 501

Query: 336  XXXXXXXLDNVIETVYVCYAIDRDTGDVCKQEVH 235
                      VIETVYVCYAIDRD G+V + EVH
Sbjct: 502  ----------VIETVYVCYAIDRDRGEVYRTEVH 525



 Score = 26.6 bits (57), Expect(2) = e-101
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = -2

Query: 134 VYVNLPISRNHRSHIA 87
           VY  LPISRNHR  IA
Sbjct: 527 VYSQLPISRNHRPPIA 542


>ref|XP_003540850.1| PREDICTED: choline transporter-like protein 1-like [Glycine max]
          Length = 552

 Score =  371 bits (953), Expect = e-100
 Identities = 198/334 (59%), Positives = 230/334 (68%), Gaps = 1/334 (0%)
 Frame = -1

Query: 1233 NWHRIELTVSIIGVSANALSENXXXXXXXXXXXXXLFVYFVPIVVFLVFARLNGKIVPRE 1054
            NWHR+ELTVSIIGV+++ALS N             L +YFVPIVVF+VFAR NGKIV + 
Sbjct: 226  NWHRVELTVSIIGVASHALSRNMALFGVLPCLSVGLVLYFVPIVVFMVFARFNGKIVVKN 285

Query: 1053 KDGEYYCAWKQDGWVPAYYVLAILTMLWSAAAMVEAQVYVISGTIAQWYFSKDEXXXXXX 874
                Y C WK+D WVPAYY LA+LTMLWSAAAMVEAQVYVISGTIA WYFSK+       
Sbjct: 286  LKSGYDCEWKEDSWVPAYYALAVLTMLWSAAAMVEAQVYVISGTIANWYFSKEHQTPKRS 345

Query: 873  XXXXXRNAFGPSFGTICFSGLLIFVVRLVRSSVDNAKQ-DLPGIFNLILRCCVNAFMAAF 697
                 RN FGPS GTIC SGLL+ VVR+VRS+VD+A+Q D PGI NL+LRCCVNA + A 
Sbjct: 346  IRTPLRNVFGPSSGTICLSGLLVCVVRMVRSAVDSARQEDTPGIVNLVLRCCVNALLTAV 405

Query: 696  DFLNKFAINFAAITGEAYCTSARMTYELLSRNLLSAVFVETVSTRILGGISFVFAAIYGI 517
            DFLNKF INFAAITGEAYC+SARMTYELL RNLLSAVFVET+S+RIL GI FVF+A Y I
Sbjct: 406  DFLNKFTINFAAITGEAYCSSARMTYELLRRNLLSAVFVETISSRILAGIVFVFSASYTI 465

Query: 516  VVCVILRGVIGIGVDSYFIAXXXXXXXXXXXXXXXXXLDNVIETVXXFIAXXXXXXXXXX 337
            V CVIL+    +G DSYF+A                    ++  V  ++           
Sbjct: 466  VACVILKAGTNLGSDSYFVAAMAWV---------------LLMVVLGYLV---------- 500

Query: 336  XXXXXXXLDNVIETVYVCYAIDRDTGDVCKQEVH 235
                   LDNVI+T+YVCYAIDRD G+VCKQ+VH
Sbjct: 501  -----HVLDNVIDTIYVCYAIDRDRGEVCKQDVH 529


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