BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001949
         (2120 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|2...   858   0.0  
ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding pro...   858   0.0  
ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|2...   857   0.0  
ref|XP_003539777.1| PREDICTED: ruBisCO large subunit-binding pro...   845   0.0  
dbj|BAE71311.1| putative rubisco subunit binding-protein alpha s...   844   0.0  

>ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|222849933|gb|EEE87480.1|
            predicted protein [Populus trichocarpa]
          Length = 586

 Score =  858 bits (2218), Expect = 0.0
 Identities = 462/593 (77%), Positives = 506/593 (85%)
 Frame = -3

Query: 2046 MASSNAISTASILSSPTQGTLRRNKVSQLQGQNVNFRPSNGNKRNGRRLSVKAAAKDIEF 1867
            MA+SNA+STASIL SP QG LRR K +Q     +NF  S       RR +V+A AKDI F
Sbjct: 1    MATSNALSTASILCSPKQGGLRR-KGNQQHNSRLNFGQST------RRFAVRANAKDIAF 53

Query: 1866 DQKSRAALQRGIDKLADAVGLTLGPRGRNVVLDEFGTPKVVNDGVTIARAIELPDAMENA 1687
            DQ SRAALQ GIDKLADAVGLTLGPRGRNVVLDEFG+PKVVNDGVTIARAIELPD MENA
Sbjct: 54   DQDSRAALQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENA 113

Query: 1686 GAALIREVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSVKKGIDKTILALIE 1507
            GAALIREVASKTNDSAGDGTTTAS+LAREIIKLGLLSVTSGANPVS+KKGIDKT+  L+E
Sbjct: 114  GAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVQGLVE 173

Query: 1506 ELENKSRPVKGRDEIKAIASISAGNDETIGTMVADAIDKVGPDGVLXXXXXXXXXXXXXX 1327
            ELE ++RPVKGRD+IKA+A+ISAGNDE IGTM+ADAIDKVGPDGVL              
Sbjct: 174  ELEKRARPVKGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEV 233

Query: 1326 XEGMEIDRGYISPQFVTNPEKMVVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLI 1147
             EGMEIDRGYISPQFVTNPEK++  FENARVLVTDQKISAIKDIIPLLEKTTQLR+PLLI
Sbjct: 234  EEGMEIDRGYISPQFVTNPEKLICVFENARVLVTDQKISAIKDIIPLLEKTTQLRSPLLI 293

Query: 1146 VAEDITGEALATLVVNKLRGIISVAAIKAPGFGERRKALLQDIAIMTGAEYQASDLSLLV 967
            +AED+TGEALATLVVNKLRGI++V+AIKAPGFGERRKA+LQDIAI+TGAE+QASDL L +
Sbjct: 294  IAEDVTGEALATLVVNKLRGILNVSAIKAPGFGERRKAMLQDIAILTGAEFQASDLGLSI 353

Query: 966  ENTSVEQLGVARXXXXXXXXXXXXXXXASKDEIQARIAQIKKELSETDSVYDSEKLAERI 787
            ENTS+EQLG+AR               ASKDE+QARIAQ+KKELSETDSVYDSEKLAERI
Sbjct: 354  ENTSIEQLGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERI 413

Query: 786  AKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSEYVPAI 607
            AKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS +VPAI
Sbjct: 414  AKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTHVPAI 473

Query: 606  KAKLEDAEERLGADIVQKALVAPASLIAQNXXXXXXXXXXXXXXXXXXVGYNAMTDKYEN 427
            K K++DA+ERLGADIVQKALVAPASLIAQN                  +GYNAMTDKYEN
Sbjct: 474  KEKIKDADERLGADIVQKALVAPASLIAQNAGIEGEVVVEKLKESEWEMGYNAMTDKYEN 533

Query: 426  LVDAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKAKPKTPAQGMPQGMSI 268
            LV+AGVIDPAKVTRCALQN+ASVAGMVLTTQAIVVEK KP+TPA   PQG+++
Sbjct: 534  LVEAGVIDPAKVTRCALQNSASVAGMVLTTQAIVVEKPKPRTPAAASPQGLTV 586


>ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like [Vitis vinifera]
          Length = 586

 Score =  858 bits (2217), Expect = 0.0
 Identities = 466/593 (78%), Positives = 505/593 (85%)
 Frame = -3

Query: 2046 MASSNAISTASILSSPTQGTLRRNKVSQLQGQNVNFRPSNGNKRNGRRLSVKAAAKDIEF 1867
            MAS+NAISTASI+ SP Q + RR +V+Q QG   N+RPSN       R  V+A+AK+I F
Sbjct: 1    MASANAISTASIIRSPKQESFRR-RVNQQQGPKFNYRPSNN------RFVVRASAKEIAF 53

Query: 1866 DQKSRAALQRGIDKLADAVGLTLGPRGRNVVLDEFGTPKVVNDGVTIARAIELPDAMENA 1687
            DQ SRAALQ GIDKLADAVGLTLGPRGRNVVLDEFG+PKVVNDGVTIARAIEL DAMENA
Sbjct: 54   DQSSRAALQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADAMENA 113

Query: 1686 GAALIREVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSVKKGIDKTILALIE 1507
            GAALIREVASKTNDSAGDGTTTAS+LAREIIKLGLLSVTSGANPVS+KKGIDKT+  L++
Sbjct: 114  GAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHELVK 173

Query: 1506 ELENKSRPVKGRDEIKAIASISAGNDETIGTMVADAIDKVGPDGVLXXXXXXXXXXXXXX 1327
            ELE K+RPV+G D+IKA+ASISAGNDE IG+M+ADAI+KVGPDGVL              
Sbjct: 174  ELEKKARPVEGGDDIKAVASISAGNDEFIGSMIADAINKVGPDGVLSIESSSSFETTVDV 233

Query: 1326 XEGMEIDRGYISPQFVTNPEKMVVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLI 1147
             EGMEIDRGYISPQFVTNPEK++ EFENARVLVTDQKI+ IKDIIPLLEKTTQLR+PLLI
Sbjct: 234  EEGMEIDRGYISPQFVTNPEKLIAEFENARVLVTDQKITTIKDIIPLLEKTTQLRSPLLI 293

Query: 1146 VAEDITGEALATLVVNKLRGIISVAAIKAPGFGERRKALLQDIAIMTGAEYQASDLSLLV 967
            VAED+TGEALATLVVNKLRGI++VAAIKAPGFGERRKALLQDIAIMTGAE+QA+DL LL+
Sbjct: 294  VAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIMTGAEFQANDLGLLI 353

Query: 966  ENTSVEQLGVARXXXXXXXXXXXXXXXASKDEIQARIAQIKKELSETDSVYDSEKLAERI 787
            ENTSVEQLG+AR               ASKDEIQARIAQIKKEL+ETDSVYD+EKLAERI
Sbjct: 354  ENTSVEQLGLARKVTITKDSTTIIADAASKDEIQARIAQIKKELAETDSVYDTEKLAERI 413

Query: 786  AKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSEYVPAI 607
            AKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAA VHLS YVPAI
Sbjct: 414  AKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSTYVPAI 473

Query: 606  KAKLEDAEERLGADIVQKALVAPASLIAQNXXXXXXXXXXXXXXXXXXVGYNAMTDKYEN 427
            K KLEDA+ERLGADIVQKALVAPASLIA N                  VGYNAMTDKYEN
Sbjct: 474  KDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKIKACEWAVGYNAMTDKYEN 533

Query: 426  LVDAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKAKPKTPAQGMPQGMSI 268
            LV+AGVIDPAKV RCALQNAASVAGMVLTTQAIVVEKAKPK P    PQG++I
Sbjct: 534  LVEAGVIDPAKVARCALQNAASVAGMVLTTQAIVVEKAKPKAPVAAPPQGLTI 586


>ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|222837676|gb|EEE76041.1|
            predicted protein [Populus trichocarpa]
          Length = 587

 Score =  857 bits (2213), Expect = 0.0
 Identities = 462/590 (78%), Positives = 504/590 (85%)
 Frame = -3

Query: 2046 MASSNAISTASILSSPTQGTLRRNKVSQLQGQNVNFRPSNGNKRNGRRLSVKAAAKDIEF 1867
            MA+SNA+STASIL SP QG LRR + +Q     +N+  S+      RR SV+A AKDI F
Sbjct: 1    MATSNALSTASILCSPKQGGLRR-RGNQQNNSRLNYGLSS------RRFSVRANAKDIAF 53

Query: 1866 DQKSRAALQRGIDKLADAVGLTLGPRGRNVVLDEFGTPKVVNDGVTIARAIELPDAMENA 1687
            DQKSRAALQ GIDKLADAVGLTLGPRGRNVVLDEFG+PKVVNDGVTIARAIELPD MENA
Sbjct: 54   DQKSRAALQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENA 113

Query: 1686 GAALIREVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSVKKGIDKTILALIE 1507
            GAALIREVASKTNDSAGDGTTTAS+LAREIIKLGLLSVTSGANPVS+K+GIDKT+  L+E
Sbjct: 114  GAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKRGIDKTVQGLVE 173

Query: 1506 ELENKSRPVKGRDEIKAIASISAGNDETIGTMVADAIDKVGPDGVLXXXXXXXXXXXXXX 1327
            ELE K+RPVKGRD+IKA+ASISAGNDE IGTM+ADAIDKVGPDGVL              
Sbjct: 174  ELEKKARPVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETVVEV 233

Query: 1326 XEGMEIDRGYISPQFVTNPEKMVVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLI 1147
             EGMEIDRGYISPQFVTNPEK++ EFENARVL+TDQKI+AIKDIIPLLEKTTQLRAPLLI
Sbjct: 234  EEGMEIDRGYISPQFVTNPEKLICEFENARVLITDQKITAIKDIIPLLEKTTQLRAPLLI 293

Query: 1146 VAEDITGEALATLVVNKLRGIISVAAIKAPGFGERRKALLQDIAIMTGAEYQASDLSLLV 967
            +AED+TGEALATLVVNKLRG+++VAAIKAPGFGERRKA+LQDIAI+TGAE+QASDL L +
Sbjct: 294  IAEDVTGEALATLVVNKLRGVLNVAAIKAPGFGERRKAMLQDIAILTGAEFQASDLGLSI 353

Query: 966  ENTSVEQLGVARXXXXXXXXXXXXXXXASKDEIQARIAQIKKELSETDSVYDSEKLAERI 787
            ENTS+EQLG+AR               ASKDE+QARIAQ+KKELSETDSVYDSEKLAERI
Sbjct: 354  ENTSIEQLGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERI 413

Query: 786  AKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSEYVPAI 607
            AKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS  VPAI
Sbjct: 414  AKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTCVPAI 473

Query: 606  KAKLEDAEERLGADIVQKALVAPASLIAQNXXXXXXXXXXXXXXXXXXVGYNAMTDKYEN 427
            K K+EDA+ERLGADIVQKALV+PASLIAQN                  +GYNAMTDKYEN
Sbjct: 474  KDKIEDADERLGADIVQKALVSPASLIAQNAGIEGEVVVEKLKASEWEIGYNAMTDKYEN 533

Query: 426  LVDAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKAKPKTPAQGMPQG 277
            L++AGVIDPAKVTRCALQN+ASVAGMVLTTQAIVVEK KPKTPA    QG
Sbjct: 534  LMEAGVIDPAKVTRCALQNSASVAGMVLTTQAIVVEKPKPKTPAAAATQG 583


>ref|XP_003539777.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like [Glycine max]
          Length = 584

 Score =  845 bits (2182), Expect = 0.0
 Identities = 455/593 (76%), Positives = 501/593 (84%)
 Frame = -3

Query: 2046 MASSNAISTASILSSPTQGTLRRNKVSQLQGQNVNFRPSNGNKRNGRRLSVKAAAKDIEF 1867
            MAS+NA+S+ASIL SP + +L R          VN+R  N       R SVKA+AK+I F
Sbjct: 1    MASTNALSSASILRSPNRQSLTRRAN---HNGRVNYRKPNN------RFSVKASAKEIAF 51

Query: 1866 DQKSRAALQRGIDKLADAVGLTLGPRGRNVVLDEFGTPKVVNDGVTIARAIELPDAMENA 1687
            DQ SR+A+Q GIDKLADAVGLTLGPRGRNVVLDEFG+PKVVNDGVTIARAIELPD MENA
Sbjct: 52   DQHSRSAMQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENA 111

Query: 1686 GAALIREVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSVKKGIDKTILALIE 1507
            GAALIREVASKTNDSAGDGTTTAS+LAREIIKLGLLSVTSGANPVS+K+GIDKT+  L+E
Sbjct: 112  GAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVQGLVE 171

Query: 1506 ELENKSRPVKGRDEIKAIASISAGNDETIGTMVADAIDKVGPDGVLXXXXXXXXXXXXXX 1327
            ELE K+RPVKG D+IKA+ASISAGNDE IG M+A+AIDKVGPDGVL              
Sbjct: 172  ELEKKARPVKGGDDIKAVASISAGNDELIGQMIAEAIDKVGPDGVLSIESSSSFETTVEV 231

Query: 1326 XEGMEIDRGYISPQFVTNPEKMVVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLI 1147
             EGMEIDRGYISPQFVTNPEK++VEFENARVL+TDQKISAIKDIIPLLEKTTQLRAPLLI
Sbjct: 232  EEGMEIDRGYISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLI 291

Query: 1146 VAEDITGEALATLVVNKLRGIISVAAIKAPGFGERRKALLQDIAIMTGAEYQASDLSLLV 967
            +AED+TGEALATLVVNKLRGI++VAAIKAPGFGERRKALLQDIAI+TGAE+QASDL LLV
Sbjct: 292  IAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLV 351

Query: 966  ENTSVEQLGVARXXXXXXXXXXXXXXXASKDEIQARIAQIKKELSETDSVYDSEKLAERI 787
            ENTSVEQLG+AR               A+KDE+QAR+AQ+KKELS+TDSVYD+EKLAERI
Sbjct: 352  ENTSVEQLGLARKITISKDSTTVIADAATKDELQARVAQLKKELSQTDSVYDTEKLAERI 411

Query: 786  AKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSEYVPAI 607
            AKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG ALVHLS +VPAI
Sbjct: 412  AKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSTHVPAI 471

Query: 606  KAKLEDAEERLGADIVQKALVAPASLIAQNXXXXXXXXXXXXXXXXXXVGYNAMTDKYEN 427
            K KLEDA+ERLGADIVQKAL+APA+LIAQN                  VGYNAM D+YEN
Sbjct: 472  KDKLEDADERLGADIVQKALIAPAALIAQNAGIEGEVVVEKIKSGEWEVGYNAMADRYEN 531

Query: 426  LVDAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKAKPKTPAQGMPQGMSI 268
            LV+AGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEK KPK P  G PQG+++
Sbjct: 532  LVEAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAPVAGAPQGLTV 584


>dbj|BAE71311.1| putative rubisco subunit binding-protein alpha subunit [Trifolium
            pratense]
          Length = 588

 Score =  844 bits (2181), Expect = 0.0
 Identities = 461/595 (77%), Positives = 499/595 (83%), Gaps = 2/595 (0%)
 Frame = -3

Query: 2046 MASSNAISTASILSSPT--QGTLRRNKVSQLQGQNVNFRPSNGNKRNGRRLSVKAAAKDI 1873
            MAS+NA+S+ SIL SPT  Q     +K ++  G+ VN+R      +N  R  VKAAAKDI
Sbjct: 1    MASTNALSSTSILRSPTNNQAQTSLSKKAKQHGR-VNYR------QNPNRFMVKAAAKDI 53

Query: 1872 EFDQKSRAALQRGIDKLADAVGLTLGPRGRNVVLDEFGTPKVVNDGVTIARAIELPDAME 1693
             FDQ SR A+Q GIDKLADAVGLTLGPRGRNVVLDEFG+PKVVNDGVTIARAIELPD ME
Sbjct: 54   AFDQHSRRAMQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPME 113

Query: 1692 NAGAALIREVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSVKKGIDKTILAL 1513
            NAGAALIREVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVS+KKGIDKT+  L
Sbjct: 114  NAGAALIREVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTVAGL 173

Query: 1512 IEELENKSRPVKGRDEIKAIASISAGNDETIGTMVADAIDKVGPDGVLXXXXXXXXXXXX 1333
            IEELE  +RPVKG D+IKA+ASISAGNDE IG M+A+AIDKVGPDGVL            
Sbjct: 174  IEELEKLARPVKGGDDIKAVASISAGNDELIGKMIAEAIDKVGPDGVLSIESSSSFETTV 233

Query: 1332 XXXEGMEIDRGYISPQFVTNPEKMVVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPL 1153
               EGMEIDRGYISPQFVTN EK +VEFENARVL+TDQKISAIKDIIPLLEKTTQLRAPL
Sbjct: 234  EVEEGMEIDRGYISPQFVTNLEKSIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPL 293

Query: 1152 LIVAEDITGEALATLVVNKLRGIISVAAIKAPGFGERRKALLQDIAIMTGAEYQASDLSL 973
             I+AEDITGEALATLVVNKLRGI++VAAIKAPGFGERRKALLQDIAI+TGAEYQASDL L
Sbjct: 294  FIIAEDITGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEYQASDLGL 353

Query: 972  LVENTSVEQLGVARXXXXXXXXXXXXXXXASKDEIQARIAQIKKELSETDSVYDSEKLAE 793
            LVENTS+EQLG+AR               ASKDE+Q+R+AQ+KKELSETDSVYDSEKLAE
Sbjct: 354  LVENTSIEQLGLARKVTISKDSTTIIADAASKDELQSRVAQLKKELSETDSVYDSEKLAE 413

Query: 792  RIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSEYVP 613
            RIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG ALVHLS YVP
Sbjct: 414  RIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSAYVP 473

Query: 612  AIKAKLEDAEERLGADIVQKALVAPASLIAQNXXXXXXXXXXXXXXXXXXVGYNAMTDKY 433
            AIK KLEDA+ERLGADIVQKALVAPASLIAQN                  VGYNAMTD Y
Sbjct: 474  AIKEKLEDADERLGADIVQKALVAPASLIAQNAGIEGEVVVEKIRNGEWEVGYNAMTDTY 533

Query: 432  ENLVDAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKAKPKTPAQGMPQGMSI 268
            ENL+++GVIDPAKVTRCALQNAASVAGMVLTTQAIVVEK KP+ P  G PQG+++
Sbjct: 534  ENLIESGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPRAPVPGAPQGLTV 588