BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001948
         (1545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding pro...   781   0.0  
emb|CBI17177.3| unnamed protein product [Vitis vinifera]              778   0.0  
ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|2...   769   0.0  
ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|2...   766   0.0  
ref|XP_002534347.1| rubisco subunit binding-protein alpha subuni...   766   0.0  

>ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like [Vitis vinifera]
          Length = 586

 Score =  781 bits (2017), Expect = 0.0
 Identities = 425/510 (83%), Positives = 447/510 (87%)
 Frame = -2

Query: 1532 RVNQLQGQKVNYRPNNGGTXXXXXXXXXXXAKEIAFDQKSRAALQSGIDKLADAVGLTLG 1353
            RVNQ QG K NYRP+N              AKEIAFDQ SRAALQ+GIDKLADAVGLTLG
Sbjct: 24   RVNQQQGPKFNYRPSNN------RFVVRASAKEIAFDQSSRAALQAGIDKLADAVGLTLG 77

Query: 1352 PRGRNVVLDEFGTPKVVNDGVTIARAIELPDAMENAGAALIREVASKTNDSAGDGTTTAS 1173
            PRGRNVVLDEFG+PKVVNDGVTIARAIEL DAMENAGAALIREVASKTNDSAGDGTTTAS
Sbjct: 78   PRGRNVVLDEFGSPKVVNDGVTIARAIELADAMENAGAALIREVASKTNDSAGDGTTTAS 137

Query: 1172 ILAREIINLGLLSVTSGANPVSIKKGIDKTVLALIEELEKKARPVQGRDDIKAIASISAG 993
            +LAREII LGLLSVTSGANPVSIKKGIDKTV  L++ELEKKARPV+G DDIKA+ASISAG
Sbjct: 138  VLAREIIKLGLLSVTSGANPVSIKKGIDKTVHELVKELEKKARPVEGGDDIKAVASISAG 197

Query: 992  NDEIIGTMVADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQFVTNPEKMIA 813
            NDE IG+M+ADAI+KVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQFVTNPEK+IA
Sbjct: 198  NDEFIGSMIADAINKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQFVTNPEKLIA 257

Query: 812  EFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDITGEALATLVVNKLRGIINV 633
            EFENARVLVTDQKI+ IKDIIPLLEKTTQLR+PLLI+AED+TGEALATLVVNKLRGI+NV
Sbjct: 258  EFENARVLVTDQKITTIKDIIPLLEKTTQLRSPLLIVAEDVTGEALATLVVNKLRGILNV 317

Query: 632  AAIKAPGFGERRKALLQDIAIMTGAEYQASDLSLLIENTSVEQLGLARXXXXXXXXXXXX 453
            AAIKAPGFGERRKALLQDIAIMTGAE+QA+DL LLIENTSVEQLGLAR            
Sbjct: 318  AAIKAPGFGERRKALLQDIAIMTGAEFQANDLGLLIENTSVEQLGLARKVTITKDSTTII 377

Query: 452  XXXASKDEIQARIAQIKKELSETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRK 273
               ASKDEIQARIAQIKKEL+ETDSVYD+EKLAERIAKLSGGVAVIKVGAATETELEDRK
Sbjct: 378  ADAASKDEIQARIAQIKKELAETDSVYDTEKLAERIAKLSGGVAVIKVGAATETELEDRK 437

Query: 272  LRIEDAKNATFAAIEEGIVPGGGAALVHLSEYVPAIKAKLEDAEERLGADIVQKALVAPA 93
            LRIEDAKNATFAAIEEGIVPGGGAA VHLS YVPAIK KLEDA+ERLGADIVQKALVAPA
Sbjct: 438  LRIEDAKNATFAAIEEGIVPGGGAAFVHLSTYVPAIKDKLEDADERLGADIVQKALVAPA 497

Query: 92   SLIAQNXXXXXXXXXXXXXXXXXXVGYNAM 3
            SLIA N                  VGYNAM
Sbjct: 498  SLIAHNAGVEGEVVVEKIKACEWAVGYNAM 527


>emb|CBI17177.3| unnamed protein product [Vitis vinifera]
          Length = 553

 Score =  778 bits (2008), Expect = 0.0
 Identities = 419/486 (86%), Positives = 441/486 (90%)
 Frame = -2

Query: 1532 RVNQLQGQKVNYRPNNGGTXXXXXXXXXXXAKEIAFDQKSRAALQSGIDKLADAVGLTLG 1353
            RVNQ QG K NYRP+N              AKEIAFDQ SRAALQ+GIDKLADAVGLTLG
Sbjct: 24   RVNQQQGPKFNYRPSNN------RFVVRASAKEIAFDQSSRAALQAGIDKLADAVGLTLG 77

Query: 1352 PRGRNVVLDEFGTPKVVNDGVTIARAIELPDAMENAGAALIREVASKTNDSAGDGTTTAS 1173
            PRGRNVVLDEFG+PKVVNDGVTIARAIEL DAMENAGAALIREVASKTNDSAGDGTTTAS
Sbjct: 78   PRGRNVVLDEFGSPKVVNDGVTIARAIELADAMENAGAALIREVASKTNDSAGDGTTTAS 137

Query: 1172 ILAREIINLGLLSVTSGANPVSIKKGIDKTVLALIEELEKKARPVQGRDDIKAIASISAG 993
            +LAREII LGLLSVTSGANPVSIKKGIDKTV  L++ELEKKARPV+G DDIKA+ASISAG
Sbjct: 138  VLAREIIKLGLLSVTSGANPVSIKKGIDKTVHELVKELEKKARPVEGGDDIKAVASISAG 197

Query: 992  NDEIIGTMVADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQFVTNPEKMIA 813
            NDE IG+M+ADAI+KVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQFVTNPEK+IA
Sbjct: 198  NDEFIGSMIADAINKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQFVTNPEKLIA 257

Query: 812  EFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDITGEALATLVVNKLRGIINV 633
            EFENARVLVTDQKI+ IKDIIPLLEKTTQLR+PLLI+AED+TGEALATLVVNKLRGI+NV
Sbjct: 258  EFENARVLVTDQKITTIKDIIPLLEKTTQLRSPLLIVAEDVTGEALATLVVNKLRGILNV 317

Query: 632  AAIKAPGFGERRKALLQDIAIMTGAEYQASDLSLLIENTSVEQLGLARXXXXXXXXXXXX 453
            AAIKAPGFGERRKALLQDIAIMTGAE+QA+DL LLIENTSVEQLGLAR            
Sbjct: 318  AAIKAPGFGERRKALLQDIAIMTGAEFQANDLGLLIENTSVEQLGLARKVTITKDSTTII 377

Query: 452  XXXASKDEIQARIAQIKKELSETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRK 273
               ASKDEIQARIAQIKKEL+ETDSVYD+EKLAERIAKLSGGVAVIKVGAATETELEDRK
Sbjct: 378  ADAASKDEIQARIAQIKKELAETDSVYDTEKLAERIAKLSGGVAVIKVGAATETELEDRK 437

Query: 272  LRIEDAKNATFAAIEEGIVPGGGAALVHLSEYVPAIKAKLEDAEERLGADIVQKALVAPA 93
            LRIEDAKNATFAAIEEGIVPGGGAA VHLS YVPAIK KLEDA+ERLGADIVQKALVAPA
Sbjct: 438  LRIEDAKNATFAAIEEGIVPGGGAAFVHLSTYVPAIKDKLEDADERLGADIVQKALVAPA 497

Query: 92   SLIAQN 75
            SLIA N
Sbjct: 498  SLIAHN 503


>ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|222837676|gb|EEE76041.1|
            predicted protein [Populus trichocarpa]
          Length = 587

 Score =  770 bits (1987), Expect = 0.0
 Identities = 409/479 (85%), Positives = 435/479 (90%)
 Frame = -2

Query: 1439 KEIAFDQKSRAALQSGIDKLADAVGLTLGPRGRNVVLDEFGTPKVVNDGVTIARAIELPD 1260
            K+IAFDQKSRAALQSGIDKLADAVGLTLGPRGRNVVLDEFG+PKVVNDGVTIARAIELPD
Sbjct: 49   KDIAFDQKSRAALQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPD 108

Query: 1259 AMENAGAALIREVASKTNDSAGDGTTTASILAREIINLGLLSVTSGANPVSIKKGIDKTV 1080
             MENAGAALIREVASKTNDSAGDGTTTAS+LAREII LGLLSVTSGANPVSIK+GIDKTV
Sbjct: 109  PMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKRGIDKTV 168

Query: 1079 LALIEELEKKARPVQGRDDIKAIASISAGNDEIIGTMVADAIDKVGPDGVLSIESSSSFE 900
              L+EELEKKARPV+GRDDIKA+ASISAGNDE+IGTM+ADAIDKVGPDGVLSIESSSSFE
Sbjct: 169  QGLVEELEKKARPVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFE 228

Query: 899  TTVDVEEGMEIDRGYISPQFVTNPEKMIAEFENARVLVTDQKISAIKDIIPLLEKTTQLR 720
            T V+VEEGMEIDRGYISPQFVTNPEK+I EFENARVL+TDQKI+AIKDIIPLLEKTTQLR
Sbjct: 229  TVVEVEEGMEIDRGYISPQFVTNPEKLICEFENARVLITDQKITAIKDIIPLLEKTTQLR 288

Query: 719  APLLIIAEDITGEALATLVVNKLRGIINVAAIKAPGFGERRKALLQDIAIMTGAEYQASD 540
            APLLIIAED+TGEALATLVVNKLRG++NVAAIKAPGFGERRKA+LQDIAI+TGAE+QASD
Sbjct: 289  APLLIIAEDVTGEALATLVVNKLRGVLNVAAIKAPGFGERRKAMLQDIAILTGAEFQASD 348

Query: 539  LSLLIENTSVEQLGLARXXXXXXXXXXXXXXXASKDEIQARIAQIKKELSETDSVYDSEK 360
            L L IENTS+EQLGLAR               ASKDE+QARIAQ+KKELSETDSVYDSEK
Sbjct: 349  LGLSIENTSIEQLGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEK 408

Query: 359  LAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSE 180
            LAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS 
Sbjct: 409  LAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLST 468

Query: 179  YVPAIKAKLEDAEERLGADIVQKALVAPASLIAQNXXXXXXXXXXXXXXXXXXVGYNAM 3
             VPAIK K+EDA+ERLGADIVQKALV+PASLIAQN                  +GYNAM
Sbjct: 469  CVPAIKDKIEDADERLGADIVQKALVSPASLIAQNAGIEGEVVVEKLKASEWEIGYNAM 527


>ref|XP_002313525.1| predicted protein [Populus trichocarpa] gi|222849933|gb|EEE87480.1|
            predicted protein [Populus trichocarpa]
          Length = 586

 Score =  766 bits (1979), Expect = 0.0
 Identities = 408/479 (85%), Positives = 435/479 (90%)
 Frame = -2

Query: 1439 KEIAFDQKSRAALQSGIDKLADAVGLTLGPRGRNVVLDEFGTPKVVNDGVTIARAIELPD 1260
            K+IAFDQ SRAALQSGIDKLADAVGLTLGPRGRNVVLDEFG+PKVVNDGVTIARAIELPD
Sbjct: 49   KDIAFDQDSRAALQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPD 108

Query: 1259 AMENAGAALIREVASKTNDSAGDGTTTASILAREIINLGLLSVTSGANPVSIKKGIDKTV 1080
             MENAGAALIREVASKTNDSAGDGTTTAS+LAREII LGLLSVTSGANPVSIKKGIDKTV
Sbjct: 109  PMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTV 168

Query: 1079 LALIEELEKKARPVQGRDDIKAIASISAGNDEIIGTMVADAIDKVGPDGVLSIESSSSFE 900
              L+EELEK+ARPV+GRDDIKA+A+ISAGNDE+IGTM+ADAIDKVGPDGVLSIESSSSFE
Sbjct: 169  QGLVEELEKRARPVKGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFE 228

Query: 899  TTVDVEEGMEIDRGYISPQFVTNPEKMIAEFENARVLVTDQKISAIKDIIPLLEKTTQLR 720
            TTV+VEEGMEIDRGYISPQFVTNPEK+I  FENARVLVTDQKISAIKDIIPLLEKTTQLR
Sbjct: 229  TTVEVEEGMEIDRGYISPQFVTNPEKLICVFENARVLVTDQKISAIKDIIPLLEKTTQLR 288

Query: 719  APLLIIAEDITGEALATLVVNKLRGIINVAAIKAPGFGERRKALLQDIAIMTGAEYQASD 540
            +PLLIIAED+TGEALATLVVNKLRGI+NV+AIKAPGFGERRKA+LQDIAI+TGAE+QASD
Sbjct: 289  SPLLIIAEDVTGEALATLVVNKLRGILNVSAIKAPGFGERRKAMLQDIAILTGAEFQASD 348

Query: 539  LSLLIENTSVEQLGLARXXXXXXXXXXXXXXXASKDEIQARIAQIKKELSETDSVYDSEK 360
            L L IENTS+EQLGLAR               ASKDE+QARIAQ+KKELSETDSVYDSEK
Sbjct: 349  LGLSIENTSIEQLGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEK 408

Query: 359  LAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSE 180
            LAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLS 
Sbjct: 409  LAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLST 468

Query: 179  YVPAIKAKLEDAEERLGADIVQKALVAPASLIAQNXXXXXXXXXXXXXXXXXXVGYNAM 3
            +VPAIK K++DA+ERLGADIVQKALVAPASLIAQN                  +GYNAM
Sbjct: 469  HVPAIKEKIKDADERLGADIVQKALVAPASLIAQNAGIEGEVVVEKLKESEWEMGYNAM 527


>ref|XP_002534347.1| rubisco subunit binding-protein alpha subunit, ruba, putative
            [Ricinus communis] gi|223525447|gb|EEF28034.1| rubisco
            subunit binding-protein alpha subunit, ruba, putative
            [Ricinus communis]
          Length = 501

 Score =  766 bits (1978), Expect = 0.0
 Identities = 410/484 (84%), Positives = 439/484 (90%)
 Frame = -2

Query: 1532 RVNQLQGQKVNYRPNNGGTXXXXXXXXXXXAKEIAFDQKSRAALQSGIDKLADAVGLTLG 1353
            R NQ Q Q++NY  ++              AK+IAFDQ SR ALQSGIDKLADAVGLTLG
Sbjct: 24   RTNQQQNQRLNYGQSS------RRFTVRANAKDIAFDQNSRTALQSGIDKLADAVGLTLG 77

Query: 1352 PRGRNVVLDEFGTPKVVNDGVTIARAIELPDAMENAGAALIREVASKTNDSAGDGTTTAS 1173
            PRGRNVVLDEFG+PKVVNDGVTIARAIELPD MENAGAALIREVASKTNDSAGDGTTTAS
Sbjct: 78   PRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVASKTNDSAGDGTTTAS 137

Query: 1172 ILAREIINLGLLSVTSGANPVSIKKGIDKTVLALIEELEKKARPVQGRDDIKAIASISAG 993
            +LAREII LGLLSVTSGANPVSIK+GIDKTV  LIEELEKKARPV+GRDDIKA+ASISAG
Sbjct: 138  VLAREIIKLGLLSVTSGANPVSIKRGIDKTVQGLIEELEKKARPVKGRDDIKAVASISAG 197

Query: 992  NDEIIGTMVADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQFVTNPEKMIA 813
            NDE+IGTM+ADAIDKVGPDGVLSIESSSSFETTV+VEEGMEIDRGYISPQFVTNPEK+I 
Sbjct: 198  NDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIC 257

Query: 812  EFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDITGEALATLVVNKLRGIINV 633
            EFENARVLVTDQKI+AIKDIIPLLEKTTQLRAPLLIIAED+TGEALATLVVNK+RGI+NV
Sbjct: 258  EFENARVLVTDQKITAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKMRGILNV 317

Query: 632  AAIKAPGFGERRKALLQDIAIMTGAEYQASDLSLLIENTSVEQLGLARXXXXXXXXXXXX 453
            AAIKAPGFGERRKALLQDIAI+TGAE+QASDL LL+ENTSVEQLG+AR            
Sbjct: 318  AAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSVEQLGIARKVTITKDSTTLI 377

Query: 452  XXXASKDEIQARIAQIKKELSETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRK 273
               ASKDE+QARIAQ+K+EL+ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRK
Sbjct: 378  ADAASKDELQARIAQLKRELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRK 437

Query: 272  LRIEDAKNATFAAIEEGIVPGGGAALVHLSEYVPAIKAKLEDAEERLGADIVQKALVAPA 93
            LRIEDAKNATFAAIEEGIVPGGGAALVHLS  VPAIK K++DA+ERLGADIVQKALVAPA
Sbjct: 438  LRIEDAKNATFAAIEEGIVPGGGAALVHLSTVVPAIKEKIKDADERLGADIVQKALVAPA 497

Query: 92   SLIA 81
            SLIA
Sbjct: 498  SLIA 501