BLASTX nr result

ID: Cnidium21_contig00001921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001921
         (1731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21551.3| unnamed protein product [Vitis vinifera]              295   e-150
ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Viti...   295   e-150
ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucu...   284   e-147
ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucu...   283   e-146
emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]   295   e-146

>emb|CBI21551.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  295 bits (756), Expect(2) = e-150
 Identities = 146/169 (86%), Positives = 157/169 (92%)
 Frame = +3

Query: 141 TRRYKNKKEALEAEADPERDQRTVFAYQMSLKATERDIYDFFSKAGKVRDVRLIMDRNSR 320
           +RR+K+KKEA+E EADPERDQRTVFAYQM LKATERD+Y+FFSKAGKVRDVRLIMDRNSR
Sbjct: 111 SRRFKDKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSR 170

Query: 321 RSKGVGYIEFYDAMSVPMAIALSGHLLLGQPVMVKPSEAEKNLVQSNASAVGAGGLAGPY 500
           RSKGVGYIEFYDAMSVPMAIALSGHLL GQPVMVKPSEAEKNLVQSNAS   +GG+AGPY
Sbjct: 171 RSKGVGYIEFYDAMSVPMAIALSGHLLHGQPVMVKPSEAEKNLVQSNASGAVSGGIAGPY 230

Query: 501 GAVERKLYVGNLHFNMTEFQLKQIFEAFGPVELVQLPADQESGHCKGFG 647
           GAV+RKLYVGNLHFNMTE QL+QIFE FG VELVQLP D E+G CKGFG
Sbjct: 231 GAVDRKLYVGNLHFNMTELQLRQIFEPFGRVELVQLPLDLETGQCKGFG 279



 Score =  265 bits (676), Expect(2) = e-150
 Identities = 138/220 (62%), Positives = 163/220 (74%), Gaps = 5/220 (2%)
 Frame = +1

Query: 745  FLQREHAKAAESLNGKLEIAGRTIKVSSVADHVGAQXXXXXXXXXXXXXXXXXXXXXQSR 924
            F + EHAKAA++LNGKL+IAGR IKVSSV DH+G Q                     QSR
Sbjct: 283  FAELEHAKAAQNLNGKLDIAGRIIKVSSVTDHIGVQDAGAKAADFDDDDGGGLSLNAQSR 342

Query: 925  ASLMQKLDRSGTATSFAGSLGAPMLYGSAPVQQSIGMPINGANS----AFPAQM-TPVAL 1089
            A LMQKLDR+G A+S AGSLG PML GSAP QQ+I + ING  +    A P Q+ T  A 
Sbjct: 343  ALLMQKLDRTGIASSIAGSLGVPMLNGSAPNQQAISLSINGQAAVSAPALPTQVVTSPAS 402

Query: 1090 EPIGKPSECLLLKNMFDPATEEDPDFDQDIKEDVEEECSKYGQVKHIYVDKNSAGYVYMR 1269
            EP+G P+ECLLLKNMFDPATE DPDFD DIKE+V+EECS +G+VKHIYV+K+SAGYVY+R
Sbjct: 403  EPVGTPTECLLLKNMFDPATEIDPDFDLDIKEEVQEECSNFGRVKHIYVEKHSAGYVYLR 462

Query: 1270 FENVEGASRAQQAMHRRWFARKMISAIFLQSYEYDAKFKG 1389
            FE VE A  AQ+AMH RWFAR++ISAIFLQ  +Y+AKFKG
Sbjct: 463  FETVEAAVTAQRAMHMRWFARRLISAIFLQPRDYEAKFKG 502


>ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Vitis vinifera]
          Length = 542

 Score =  295 bits (755), Expect(2) = e-150
 Identities = 146/168 (86%), Positives = 156/168 (92%)
 Frame = +3

Query: 144 RRYKNKKEALEAEADPERDQRTVFAYQMSLKATERDIYDFFSKAGKVRDVRLIMDRNSRR 323
           RR+K+KKEA+E EADPERDQRTVFAYQM LKATERD+Y+FFSKAGKVRDVRLIMDRNSRR
Sbjct: 150 RRFKDKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 209

Query: 324 SKGVGYIEFYDAMSVPMAIALSGHLLLGQPVMVKPSEAEKNLVQSNASAVGAGGLAGPYG 503
           SKGVGYIEFYDAMSVPMAIALSGHLL GQPVMVKPSEAEKNLVQSNAS   +GG+AGPYG
Sbjct: 210 SKGVGYIEFYDAMSVPMAIALSGHLLHGQPVMVKPSEAEKNLVQSNASGAVSGGIAGPYG 269

Query: 504 AVERKLYVGNLHFNMTEFQLKQIFEAFGPVELVQLPADQESGHCKGFG 647
           AV+RKLYVGNLHFNMTE QL+QIFE FG VELVQLP D E+G CKGFG
Sbjct: 270 AVDRKLYVGNLHFNMTELQLRQIFEPFGRVELVQLPLDLETGQCKGFG 317



 Score =  265 bits (676), Expect(2) = e-150
 Identities = 138/220 (62%), Positives = 163/220 (74%), Gaps = 5/220 (2%)
 Frame = +1

Query: 745  FLQREHAKAAESLNGKLEIAGRTIKVSSVADHVGAQXXXXXXXXXXXXXXXXXXXXXQSR 924
            F + EHAKAA++LNGKL+IAGR IKVSSV DH+G Q                     QSR
Sbjct: 321  FAELEHAKAAQNLNGKLDIAGRIIKVSSVTDHIGVQDAGAKAADFDDDDGGGLSLNAQSR 380

Query: 925  ASLMQKLDRSGTATSFAGSLGAPMLYGSAPVQQSIGMPINGANS----AFPAQM-TPVAL 1089
            A LMQKLDR+G A+S AGSLG PML GSAP QQ+I + ING  +    A P Q+ T  A 
Sbjct: 381  ALLMQKLDRTGIASSIAGSLGVPMLNGSAPNQQAISLSINGQAAVSAPALPTQVVTSPAS 440

Query: 1090 EPIGKPSECLLLKNMFDPATEEDPDFDQDIKEDVEEECSKYGQVKHIYVDKNSAGYVYMR 1269
            EP+G P+ECLLLKNMFDPATE DPDFD DIKE+V+EECS +G+VKHIYV+K+SAGYVY+R
Sbjct: 441  EPVGTPTECLLLKNMFDPATEIDPDFDLDIKEEVQEECSNFGRVKHIYVEKHSAGYVYLR 500

Query: 1270 FENVEGASRAQQAMHRRWFARKMISAIFLQSYEYDAKFKG 1389
            FE VE A  AQ+AMH RWFAR++ISAIFLQ  +Y+AKFKG
Sbjct: 501  FETVEAAVTAQRAMHMRWFARRLISAIFLQPRDYEAKFKG 540


>ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
          Length = 598

 Score =  284 bits (727), Expect(2) = e-147
 Identities = 144/169 (85%), Positives = 153/169 (90%)
 Frame = +3

Query: 141 TRRYKNKKEALEAEADPERDQRTVFAYQMSLKATERDIYDFFSKAGKVRDVRLIMDRNSR 320
           +RR K KK+  E EADPERDQRTVFAYQM LKATERD+Y+FFSKAGKVRDVRLIMDRNSR
Sbjct: 210 SRRMKEKKDTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSR 269

Query: 321 RSKGVGYIEFYDAMSVPMAIALSGHLLLGQPVMVKPSEAEKNLVQSNASAVGAGGLAGPY 500
           RSKGVGY+EFYDAMSVPMAIALSG LLLGQPVMVKPSEAEKNLVQSN +  GA G AGPY
Sbjct: 270 RSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTT--GASG-AGPY 326

Query: 501 GAVERKLYVGNLHFNMTEFQLKQIFEAFGPVELVQLPADQESGHCKGFG 647
           GAV+RKLYVGNLHFNMTE  L++IFEAFGPVELVQLP D ESGHCKGFG
Sbjct: 327 GAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFG 375



 Score =  265 bits (678), Expect(2) = e-147
 Identities = 137/220 (62%), Positives = 158/220 (71%), Gaps = 4/220 (1%)
 Frame = +1

Query: 745  FLQREHAKAAESLNGKLEIAGRTIKVSSVADHVGAQXXXXXXXXXXXXXXXXXXXXXQSR 924
            F   EHAKAA+SLNGKLEIAGRTIKVSSV DH+GAQ                     QSR
Sbjct: 379  FAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLALNAQSR 438

Query: 925  ASLMQKLDRSGTATSFAGSLGAPMLYGSAPVQQSIGMPING----ANSAFPAQMTPVALE 1092
            A LMQKLDR+G ATS AGSLGAP+L GSAP Q+S  +P+NG    A    PA  TP  L+
Sbjct: 439  ALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQAAVAAPVLPANFTPPVLQ 498

Query: 1093 PIGKPSECLLLKNMFDPATEEDPDFDQDIKEDVEEECSKYGQVKHIYVDKNSAGYVYMRF 1272
             +G PSECLLLKNMFDP+TE  PDFD +IKEDVEEECSKYG+VKHIYVDKNSAG VY+++
Sbjct: 499  SVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGRVKHIYVDKNSAGCVYLQY 558

Query: 1273 ENVEGASRAQQAMHRRWFARKMISAIFLQSYEYDAKFKGA 1392
            + VE A  AQ+AMH RWFA + IS +F+Q   Y+AKF GA
Sbjct: 559  DTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA 598


>ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
          Length = 598

 Score =  283 bits (723), Expect(2) = e-146
 Identities = 144/169 (85%), Positives = 152/169 (89%)
 Frame = +3

Query: 141 TRRYKNKKEALEAEADPERDQRTVFAYQMSLKATERDIYDFFSKAGKVRDVRLIMDRNSR 320
           +RR K KK   E EADPERDQRTVFAYQM LKATERD+Y+FFSKAGKVRDVRLIMDRNSR
Sbjct: 210 SRRMKEKKGTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSR 269

Query: 321 RSKGVGYIEFYDAMSVPMAIALSGHLLLGQPVMVKPSEAEKNLVQSNASAVGAGGLAGPY 500
           RSKGVGY+EFYDAMSVPMAIALSG LLLGQPVMVKPSEAEKNLVQSN +  GA G AGPY
Sbjct: 270 RSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTT--GASG-AGPY 326

Query: 501 GAVERKLYVGNLHFNMTEFQLKQIFEAFGPVELVQLPADQESGHCKGFG 647
           GAV+RKLYVGNLHFNMTE  L++IFEAFGPVELVQLP D ESGHCKGFG
Sbjct: 327 GAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFG 375



 Score =  265 bits (678), Expect(2) = e-146
 Identities = 137/220 (62%), Positives = 158/220 (71%), Gaps = 4/220 (1%)
 Frame = +1

Query: 745  FLQREHAKAAESLNGKLEIAGRTIKVSSVADHVGAQXXXXXXXXXXXXXXXXXXXXXQSR 924
            F   EHAKAA+SLNGKLEIAGRTIKVSSV DH+GAQ                     QSR
Sbjct: 379  FAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLALNAQSR 438

Query: 925  ASLMQKLDRSGTATSFAGSLGAPMLYGSAPVQQSIGMPING----ANSAFPAQMTPVALE 1092
            A LMQKLDR+G ATS AGSLGAP+L GSAP Q+S  +P+NG    A    PA  TP  L+
Sbjct: 439  ALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQAAVAAPVLPANFTPPVLQ 498

Query: 1093 PIGKPSECLLLKNMFDPATEEDPDFDQDIKEDVEEECSKYGQVKHIYVDKNSAGYVYMRF 1272
             +G PSECLLLKNMFDP+TE  PDFD +IKEDVEEECSKYG+VKHIYVDKNSAG VY+++
Sbjct: 499  SVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGRVKHIYVDKNSAGCVYLQY 558

Query: 1273 ENVEGASRAQQAMHRRWFARKMISAIFLQSYEYDAKFKGA 1392
            + VE A  AQ+AMH RWFA + IS +F+Q   Y+AKF GA
Sbjct: 559  DTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA 598


>emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]
          Length = 461

 Score =  295 bits (755), Expect(2) = e-146
 Identities = 146/168 (86%), Positives = 156/168 (92%)
 Frame = +3

Query: 144 RRYKNKKEALEAEADPERDQRTVFAYQMSLKATERDIYDFFSKAGKVRDVRLIMDRNSRR 323
           RR+K+KKEA+E EADPERDQRTVFAYQM LKATERD+Y+FFSKAGKVRDVRLIMDRNSRR
Sbjct: 76  RRFKDKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 135

Query: 324 SKGVGYIEFYDAMSVPMAIALSGHLLLGQPVMVKPSEAEKNLVQSNASAVGAGGLAGPYG 503
           SKGVGYIEFYDAMSVPMAIALSGHLL GQPVMVKPSEAEKNLVQSNAS   +GG+AGPYG
Sbjct: 136 SKGVGYIEFYDAMSVPMAIALSGHLLHGQPVMVKPSEAEKNLVQSNASGAVSGGIAGPYG 195

Query: 504 AVERKLYVGNLHFNMTEFQLKQIFEAFGPVELVQLPADQESGHCKGFG 647
           AV+RKLYVGNLHFNMTE QL+QIFE FG VELVQLP D E+G CKGFG
Sbjct: 196 AVDRKLYVGNLHFNMTELQLRQIFEPFGRVELVQLPLDLETGQCKGFG 243



 Score =  251 bits (640), Expect(2) = e-146
 Identities = 134/220 (60%), Positives = 158/220 (71%), Gaps = 5/220 (2%)
 Frame = +1

Query: 745  FLQREHAKAAESLNGKLEIAGRTIKVSSVADHVGAQXXXXXXXXXXXXXXXXXXXXXQSR 924
            F + EHAKAA++LNGKL+IAGR IKVSSV DH+G Q                     QSR
Sbjct: 247  FAELEHAKAAQNLNGKLDIAGRIIKVSSVTDHIGVQDAGAKAADFDDDDGGGLSLNAQSR 306

Query: 925  ASLMQKLDRSGTATSFAGSLGAPMLYGSAPVQQSIGMPINGANS----AFPAQM-TPVAL 1089
            A LMQKLDR+G       SLG PML GSAP QQ+I + ING  +    A P Q+ T  A 
Sbjct: 307  ALLMQKLDRTG-------SLGVPMLNGSAPNQQAISLSINGQAAVSAPALPTQVVTSPAS 359

Query: 1090 EPIGKPSECLLLKNMFDPATEEDPDFDQDIKEDVEEECSKYGQVKHIYVDKNSAGYVYMR 1269
            EP+G P+ECLLLKNMFDPATE DPDFD DIKE+V+EECS +G+VKHIYV+K+SAGYVY+R
Sbjct: 360  EPVGTPTECLLLKNMFDPATEIDPDFDLDIKEEVQEECSNFGRVKHIYVEKHSAGYVYLR 419

Query: 1270 FENVEGASRAQQAMHRRWFARKMISAIFLQSYEYDAKFKG 1389
            FE VE A  AQ+AMH RWFAR++ISAIFLQ  +Y+AKFKG
Sbjct: 420  FETVEAAVTAQRAMHMRWFARRLISAIFLQPRDYEAKFKG 459


Top