BLASTX nr result
ID: Cnidium21_contig00001919
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00001919 (838 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus ... 86 1e-14 ref|XP_003594235.1| F-box protein [Medicago truncatula] gi|35548... 82 2e-13 ref|XP_002531022.1| Transitional endoplasmic reticulum ATPase, p... 79 1e-12 ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis... 76 8e-12 ref|XP_003598385.1| F-box family protein [Medicago truncatula] g... 75 2e-11 >ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223543895|gb|EEF45421.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 358 Score = 85.5 bits (210), Expect = 1e-14 Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 4/190 (2%) Frame = +1 Query: 1 LRTNRWNKVGISPYEHVSPFDHVNVRIPARGAAGIFVEGSLHWLAKNYNDSN-SCLISAF 177 ++ N W VG PY + D GI + G++HW+ DS S +I AF Sbjct: 176 VKENSWRSVGGFPYS-ILALD-----------PGIQLNGAIHWVVSRSKDSTKSQIIGAF 223 Query: 178 NIAKKEFFEVPPPKGVFDYITKCPRLGVLKGCLCLTTG--VYNRNQLWVMKEYGVVESWV 351 ++ +++F++VPPP V ++ +GV CLC+ G V + N WVMK YG+ +SW Sbjct: 224 DLVEEKFWDVPPPVSVHNFYG----IGVFGECLCILPGSDVTSHNDFWVMKRYGIRDSWT 279 Query: 352 KMSVFLTEDSSVVSLDVQEDSSFVMLEGGRFVLLISNGKEATLQDMKVIGLPHDFRVGM- 528 K+ + ++ + L V ++ ++ G+ VL + +E T QD+ + G+P + Sbjct: 280 KVVINISY-FRMKPLGVFDNHKALLEIDGKLVLY--SFREGTYQDLVIQGIPVGIEFDVE 336 Query: 529 TFVDTLVSPN 558 T+ ++LVSP+ Sbjct: 337 TYAESLVSPH 346 >ref|XP_003594235.1| F-box protein [Medicago truncatula] gi|355483283|gb|AES64486.1| F-box protein [Medicago truncatula] Length = 325 Score = 82.0 bits (201), Expect = 2e-13 Identities = 67/200 (33%), Positives = 97/200 (48%), Gaps = 14/200 (7%) Frame = +1 Query: 1 LRTNRWNKVGISPYEHVSPFDHVNVRIPARGAAGIFVEGSLHW-LAKNYNDSNSCLISAF 177 L+TN W + PY + A GIFVE SLHW + + ++S+ CLI AF Sbjct: 104 LKTNSWKIIPSMPYA-----------LKYVQAMGIFVENSLHWVMTREIDESHPCLIVAF 152 Query: 178 NIAKKEFFEVPPPKGVFDYITKCPRLGVLKGCLCLTTGVYNRN-QLWVMKEYGVVESWVK 354 N+ F VP P+ V + + VL+GCLC+T N ++WVMKEYG +SW K Sbjct: 153 NLTLDIFNVVPLPEEVNSESFEI-NVVVLEGCLCMTLNYRNTEFEVWVMKEYGSTDSWCK 211 Query: 355 MSVFLTEDSSVVSLDV------QEDSSFVMLEGGRFVLLISNGKEATLQDMK------VI 498 + L E +V L++ D S V+LE G V N + D+K V Sbjct: 212 LFT-LMEPCFLVDLEIFRPLCYSSDGSKVLLE-GIHVSTEGNNRNLIWYDLKSEQVSFVK 269 Query: 499 GLPHDFRVGMTFVDTLVSPN 558 G+P +F + +V + V P+ Sbjct: 270 GIP-NFNGTIIWVGSFVPPS 288 >ref|XP_002531022.1| Transitional endoplasmic reticulum ATPase, putative [Ricinus communis] gi|223529397|gb|EEF31360.1| Transitional endoplasmic reticulum ATPase, putative [Ricinus communis] Length = 1029 Score = 79.3 bits (194), Expect = 1e-12 Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 7/192 (3%) Frame = +1 Query: 1 LRTNRWNKVGISPYEHVSPFDHVNVRIPARGAAGIFVEGSLHWLAKNYNDSNSCLISAFN 180 LRTN W + S SP ++ +P GIFV G+LHW A++ + + LI++F+ Sbjct: 801 LRTNSWRTIQDS-----SP-SYLPYPLP-----GIFVHGALHWSARHGIEPDYSLIASFD 849 Query: 181 IAKKEFFEVPPPKGVFDYITKCPRLGVLKGCLCL--TTGVYNRNQLWVMKEYGVVESWVK 354 +A ++F EVP PKG + LGVL+GCL T N + +++M +Y V++SW K Sbjct: 850 LAAEKFKEVPEPKG--EDRQSFFTLGVLRGCLSYVKTYVEGNISAIYMMNKYNVMDSWTK 907 Query: 355 MSVFLTEDSSVVS-----LDVQEDSSFVMLEGGRFVLLISNGKEATLQDMKVIGLPHDFR 519 F + ++ +S L +D M+ + +LL S K L M++ H+F+ Sbjct: 908 EFRFASPSATALSPELLPLCYTKDGVIAMMNSSKELLLCS-PKSQMLNVMEITAGHHNFQ 966 Query: 520 VGMTFVDTLVSP 555 + + +++TLVSP Sbjct: 967 M-IAYLETLVSP 977 >ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus] gi|449508988|ref|XP_004163461.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus] Length = 179 Score = 76.3 bits (186), Expect = 8e-12 Identities = 56/159 (35%), Positives = 84/159 (52%), Gaps = 8/159 (5%) Frame = +1 Query: 100 GIFVEGSLHWL-AKNYNDSNSCLISAFNIAKKEFFEVPPPKGVFDYITKCP-RLGVLKGC 273 G+FV +LHW+ ++N + L+ AF++ F E+P P+ + D+ KC + VL GC Sbjct: 2 GVFVNNALHWVVSENLGMGLADLVVAFDLGTGRFEEIPLPE-LTDF--KCEIHVDVLGGC 58 Query: 274 LCLTTGVYN-RNQLWVMKEYGVVESWVKMSV-----FLTEDSSVVSLDVQEDSSFVMLEG 435 LCL R ++WVMKEYGV ESW+K+ F+ SV L + V+L Sbjct: 59 LCLIANYDRVRFEVWVMKEYGVQESWMKLLTVSQVDFVGSIKSVKPLTYSKTGCKVLLLH 118 Query: 436 GRFVLLISNGKEATLQDMKVIGLPHDFRVGMTFVDTLVS 552 R L+ + T+ D + GLPH F T V++L+S Sbjct: 119 NRRKLIWYDLDTQTVHDAVIDGLPHSFD-AETLVESLIS 156 >ref|XP_003598385.1| F-box family protein [Medicago truncatula] gi|355487433|gb|AES68636.1| F-box family protein [Medicago truncatula] Length = 373 Score = 75.1 bits (183), Expect = 2e-11 Identities = 47/121 (38%), Positives = 67/121 (55%), Gaps = 2/121 (1%) Frame = +1 Query: 1 LRTNRWNKVGISPYEHVSPFDHVNVRIPARGAAGIFVEGSLHWLA--KNYNDSNSCLISA 174 L +N W + P+ V PF G +G FV G+++WLA K Y N ++S Sbjct: 198 LGSNIWRNIQEFPFG-VFPF----------GRSGKFVSGTINWLASRKFYPGCNHFIVS- 245 Query: 175 FNIAKKEFFEVPPPKGVFDYITKCPRLGVLKGCLCLTTGVYNRNQLWVMKEYGVVESWVK 354 F++AK+ + ++ PP + K P LGVLK CLCLT G + +WVMK+YG ESW K Sbjct: 246 FDLAKESYQKLSPPSYGGANVGKMPTLGVLKDCLCLTCG----DDVWVMKQYGKKESWTK 301 Query: 355 M 357 + Sbjct: 302 L 302