BLASTX nr result

ID: Cnidium21_contig00001904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001904
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305349.1| predicted protein [Populus trichocarpa] gi|2...   127   2e-27
ref|XP_002325290.1| predicted protein [Populus trichocarpa] gi|2...   126   6e-27
ref|XP_004169752.1| PREDICTED: cleft lip and palate transmembran...   125   1e-26
ref|XP_004144352.1| PREDICTED: cleft lip and palate transmembran...   125   1e-26
ref|XP_002271151.1| PREDICTED: cleft lip and palate transmembran...   124   3e-26

>ref|XP_002305349.1| predicted protein [Populus trichocarpa] gi|222848313|gb|EEE85860.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score =  127 bits (320), Expect = 2e-27
 Identities = 60/90 (66%), Positives = 73/90 (81%), Gaps = 2/90 (2%)
 Frame = +3

Query: 183 ALKHNGSLYAYIFIARSGYPSDPKDPEYQPLVAFRRTYPVVTNLPKSKAGKKRSLLANSD 362
           ALKHNG+LYA+ F ARSGYP DP DPEYQPL AF RT+PVV  LPKSK  K++SLL +S 
Sbjct: 95  ALKHNGTLYAHAFFARSGYPPDPSDPEYQPLAAFGRTHPVVAYLPKSKTDKRKSLLGDSK 154

Query: 363 DN--GEPATEVIEDARADLKDDGPVEWISY 446
           D+  GE  ++V++D++AD KDDGPVEWISY
Sbjct: 155 DSKEGEVVSQVVDDSQADSKDDGPVEWISY 184


>ref|XP_002325290.1| predicted protein [Populus trichocarpa] gi|222862165|gb|EEE99671.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score =  126 bits (316), Expect = 6e-27
 Identities = 60/88 (68%), Positives = 72/88 (81%)
 Frame = +3

Query: 183 ALKHNGSLYAYIFIARSGYPSDPKDPEYQPLVAFRRTYPVVTNLPKSKAGKKRSLLANSD 362
           ALKHNG+LYA+IF A+SGYP DP DPEYQPL AF RT+PVVT LPKSK+ K++SL  NS 
Sbjct: 95  ALKHNGTLYAHIFFAQSGYPPDPSDPEYQPLAAFGRTHPVVTYLPKSKSDKRKSLWGNSK 154

Query: 363 DNGEPATEVIEDARADLKDDGPVEWISY 446
           D    + EV++D++AD KDDGPVEWISY
Sbjct: 155 D----SEEVVDDSQADSKDDGPVEWISY 178


>ref|XP_004169752.1| PREDICTED: cleft lip and palate transmembrane protein 1 homolog,
           partial [Cucumis sativus]
          Length = 243

 Score =  125 bits (314), Expect = 1e-26
 Identities = 59/90 (65%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
 Frame = +3

Query: 183 ALKHNGSLYAYIFIARSGYPSDPKDPEYQPLVAFRRTYPVVTNLPKSKAGKKRSLLANSD 362
           ALK NGSLYA++F ARSGY  DP DPE+QPL  F RT+PVV  LPKSKAGK+RSLL N++
Sbjct: 127 ALKQNGSLYAHVFFARSGYTPDPSDPEFQPLATFGRTHPVVLYLPKSKAGKRRSLLGNTE 186

Query: 363 --DNGEPATEVIEDARADLKDDGPVEWISY 446
             D GE   EV++D + D+KDDGPVEW+SY
Sbjct: 187 GSDTGEILKEVVDDNQVDVKDDGPVEWVSY 216


>ref|XP_004144352.1| PREDICTED: cleft lip and palate transmembrane protein 1-like
           [Cucumis sativus]
          Length = 595

 Score =  125 bits (314), Expect = 1e-26
 Identities = 59/90 (65%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
 Frame = +3

Query: 183 ALKHNGSLYAYIFIARSGYPSDPKDPEYQPLVAFRRTYPVVTNLPKSKAGKKRSLLANSD 362
           ALK NGSLYA++F ARSGY  DP DPE+QPL  F RT+PVV  LPKSKAGK+RSLL N++
Sbjct: 127 ALKQNGSLYAHVFFARSGYTPDPSDPEFQPLATFGRTHPVVLYLPKSKAGKRRSLLGNTE 186

Query: 363 --DNGEPATEVIEDARADLKDDGPVEWISY 446
             D GE   EV++D + D+KDDGPVEW+SY
Sbjct: 187 GSDTGEILKEVVDDNQVDVKDDGPVEWVSY 216


>ref|XP_002271151.1| PREDICTED: cleft lip and palate transmembrane protein 1 homolog
           [Vitis vinifera] gi|296084816|emb|CBI27698.3| unnamed
           protein product [Vitis vinifera]
          Length = 593

 Score =  124 bits (310), Expect = 3e-26
 Identities = 58/90 (64%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
 Frame = +3

Query: 183 ALKHNGSLYAYIFIARSGYPSDPKDPEYQPLVAFRRTYPVVTNLPKSKAGKKRSLLANSD 362
           ALKHNGSLYA++F ARSGYP DP DPEY  L AF RT+PVV  LPKS+A K++SLL NS 
Sbjct: 124 ALKHNGSLYAHVFFARSGYPPDPNDPEYDKLAAFERTHPVVIYLPKSRADKRKSLLGNSK 183

Query: 363 DNGE--PATEVIEDARADLKDDGPVEWISY 446
           ++ E   A+E++ED +AD KD+GPV+WISY
Sbjct: 184 ESDEVVKASEMVEDTQADSKDEGPVDWISY 213


Top