BLASTX nr result

ID: Cnidium21_contig00001903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001903
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putativ...   179   5e-43
ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   170   2e-40
ref|XP_003525640.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   169   4e-40
ref|XP_003634187.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   167   2e-39
emb|CBI15398.3| unnamed protein product [Vitis vinifera]              167   2e-39

>ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223531323|gb|EEF33161.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 590

 Score =  179 bits (453), Expect = 5e-43
 Identities = 86/108 (79%), Positives = 100/108 (92%)
 Frame = -1

Query: 324 MSTATFESMSLSEPTMKAIKDMGFQYTTEIQARSIPLLIKGRDVLGAARTGSGKTLAFLV 145
           MST +FES+ LSEPT KAI++MGFQY T+IQAR+IP L+ G+DVLGAARTGSGKTLAFL+
Sbjct: 101 MSTDSFESLGLSEPTRKAIQEMGFQYLTQIQARAIPPLLVGKDVLGAARTGSGKTLAFLI 160

Query: 144 PAVELLYELHFAPRNGTGVIIICPTRELAIQTHAVAEELLKYHSQTHG 1
           PAVELLY +HFAPRNGTGV++ICPTRELAIQTHAVA++LLKYHSQT G
Sbjct: 161 PAVELLYNVHFAPRNGTGVVVICPTRELAIQTHAVAKDLLKYHSQTLG 208


>ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine
           max]
          Length = 575

 Score =  170 bits (431), Expect = 2e-40
 Identities = 84/108 (77%), Positives = 95/108 (87%)
 Frame = -1

Query: 324 MSTATFESMSLSEPTMKAIKDMGFQYTTEIQARSIPLLIKGRDVLGAARTGSGKTLAFLV 145
           MST +FES+ LSEPT KAI DMGF + T+IQAR+IP L+ G+DVLGAARTGSGKTLAFL+
Sbjct: 87  MSTESFESLGLSEPTYKAIMDMGFHHMTQIQARAIPPLLIGKDVLGAARTGSGKTLAFLI 146

Query: 144 PAVELLYELHFAPRNGTGVIIICPTRELAIQTHAVAEELLKYHSQTHG 1
           PAVELLY + F PRNG GVI+ICPTRELAIQTHAVA+ELLKYHSQT G
Sbjct: 147 PAVELLYNVKFTPRNGAGVIVICPTRELAIQTHAVAKELLKYHSQTLG 194


>ref|XP_003525640.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine
           max]
          Length = 572

 Score =  169 bits (428), Expect = 4e-40
 Identities = 83/108 (76%), Positives = 95/108 (87%)
 Frame = -1

Query: 324 MSTATFESMSLSEPTMKAIKDMGFQYTTEIQARSIPLLIKGRDVLGAARTGSGKTLAFLV 145
           MST +FES+ LSEPT KAI DMGF + T+IQAR+IP L+ G+DVLGAARTGSGKTLAFL+
Sbjct: 84  MSTESFESLGLSEPTYKAIMDMGFHHMTQIQARAIPPLLIGKDVLGAARTGSGKTLAFLI 143

Query: 144 PAVELLYELHFAPRNGTGVIIICPTRELAIQTHAVAEELLKYHSQTHG 1
           PA+ELLY + F PRNG GVI+ICPTRELAIQTHAVA+ELLKYHSQT G
Sbjct: 144 PALELLYNVKFTPRNGAGVIVICPTRELAIQTHAVAKELLKYHSQTLG 191


>ref|XP_003634187.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like isoform 2
           [Vitis vinifera]
          Length = 503

 Score =  167 bits (422), Expect = 2e-39
 Identities = 81/108 (75%), Positives = 94/108 (87%)
 Frame = -1

Query: 324 MSTATFESMSLSEPTMKAIKDMGFQYTTEIQARSIPLLIKGRDVLGAARTGSGKTLAFLV 145
           MST  F ++ LSEPTMKAI DMGF   T+IQAR+IP L+ G+DVLGAARTGSGKTLAFL+
Sbjct: 89  MSTEAFSALGLSEPTMKAINDMGFGNMTQIQARAIPPLLLGKDVLGAARTGSGKTLAFLI 148

Query: 144 PAVELLYELHFAPRNGTGVIIICPTRELAIQTHAVAEELLKYHSQTHG 1
           PAVELLY + F PRNGTGV++ICPTRELAIQTHAVA++LLKYH+QT G
Sbjct: 149 PAVELLYHISFMPRNGTGVVVICPTRELAIQTHAVAKDLLKYHTQTLG 196


>emb|CBI15398.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  167 bits (422), Expect = 2e-39
 Identities = 81/108 (75%), Positives = 94/108 (87%)
 Frame = -1

Query: 324 MSTATFESMSLSEPTMKAIKDMGFQYTTEIQARSIPLLIKGRDVLGAARTGSGKTLAFLV 145
           MST  F ++ LSEPTMKAI DMGF   T+IQAR+IP L+ G+DVLGAARTGSGKTLAFL+
Sbjct: 1   MSTEAFSALGLSEPTMKAINDMGFGNMTQIQARAIPPLLLGKDVLGAARTGSGKTLAFLI 60

Query: 144 PAVELLYELHFAPRNGTGVIIICPTRELAIQTHAVAEELLKYHSQTHG 1
           PAVELLY + F PRNGTGV++ICPTRELAIQTHAVA++LLKYH+QT G
Sbjct: 61  PAVELLYHISFMPRNGTGVVVICPTRELAIQTHAVAKDLLKYHTQTLG 108


Top