BLASTX nr result

ID: Cnidium21_contig00001884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001884
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310998.1| predicted protein [Populus trichocarpa] gi|2...   105   2e-38
ref|XP_002267799.2| PREDICTED: charged multivesicular body prote...   103   7e-38
ref|XP_004135046.1| PREDICTED: charged multivesicular body prote...   102   9e-38
ref|XP_002316482.1| predicted protein [Populus trichocarpa] gi|2...   103   9e-38
ref|XP_002280464.1| PREDICTED: charged multivesicular body prote...   102   1e-37

>ref|XP_002310998.1| predicted protein [Populus trichocarpa] gi|222850818|gb|EEE88365.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  105 bits (263), Expect(2) = 2e-38
 Identities = 51/56 (91%), Positives = 54/56 (96%)
 Frame = +3

Query: 3   PPPSLNDASDRINKRGETVDEKIKRLDAELARYKEQIKKTRPGPAQEAVKSRAMRV 170
           PPPS+ D+SDRINKRGETVDEKIK+LDAELARYKEQIK TRPGPAQEAVKSRAMRV
Sbjct: 13  PPPSIQDSSDRINKRGETVDEKIKKLDAELARYKEQIKNTRPGPAQEAVKSRAMRV 68



 Score = 78.2 bits (191), Expect(2) = 2e-38
 Identities = 37/39 (94%), Positives = 39/39 (100%)
 Frame = +2

Query: 245 KQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTA 361
           KQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQT++A
Sbjct: 70  KQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTVSA 108


>ref|XP_002267799.2| PREDICTED: charged multivesicular body protein 5-like [Vitis
           vinifera] gi|296084445|emb|CBI25004.3| unnamed protein
           product [Vitis vinifera]
          Length = 237

 Score =  103 bits (258), Expect(2) = 7e-38
 Identities = 49/56 (87%), Positives = 55/56 (98%)
 Frame = +3

Query: 3   PPPSLNDASDRINKRGETVDEKIKRLDAELARYKEQIKKTRPGPAQEAVKSRAMRV 170
           PPPS+ DA+DRINKRGETVDEKIK+LDAEL+RY+EQIKKTRPGPAQEAVK+RAMRV
Sbjct: 13  PPPSVQDATDRINKRGETVDEKIKKLDAELSRYREQIKKTRPGPAQEAVKARAMRV 68



 Score = 78.6 bits (192), Expect(2) = 7e-38
 Identities = 37/39 (94%), Positives = 39/39 (100%)
 Frame = +2

Query: 245 KQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTA 361
           KQKRMYEGQRDMLYNQTFNLDQVAFA+EGIKDAQQTM+A
Sbjct: 70  KQKRMYEGQRDMLYNQTFNLDQVAFAAEGIKDAQQTMSA 108


>ref|XP_004135046.1| PREDICTED: charged multivesicular body protein 5-like [Cucumis
           sativus] gi|449522013|ref|XP_004168023.1| PREDICTED:
           charged multivesicular body protein 5-like [Cucumis
           sativus]
          Length = 237

 Score =  102 bits (254), Expect(2) = 9e-38
 Identities = 48/56 (85%), Positives = 54/56 (96%)
 Frame = +3

Query: 3   PPPSLNDASDRINKRGETVDEKIKRLDAELARYKEQIKKTRPGPAQEAVKSRAMRV 170
           PPPS+ DASDRINKRGE+VD+KIK+LD EL+RYKEQIKKTRPGPAQEAVK+RAMRV
Sbjct: 13  PPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEAVKARAMRV 68



 Score = 79.7 bits (195), Expect(2) = 9e-38
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = +2

Query: 245 KQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTA 361
           KQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTM+A
Sbjct: 70  KQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSA 108


>ref|XP_002316482.1| predicted protein [Populus trichocarpa] gi|222865522|gb|EEF02653.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  103 bits (257), Expect(2) = 9e-38
 Identities = 48/56 (85%), Positives = 55/56 (98%)
 Frame = +3

Query: 3   PPPSLNDASDRINKRGETVDEKIKRLDAELARYKEQIKKTRPGPAQEAVKSRAMRV 170
           PPPS+ DAS++INKRG+TVDEKIK+LDAELARYKEQIKKTRPGPAQEAVK+RAMR+
Sbjct: 13  PPPSIQDASEKINKRGDTVDEKIKKLDAELARYKEQIKKTRPGPAQEAVKARAMRI 68



 Score = 78.6 bits (192), Expect(2) = 9e-38
 Identities = 37/39 (94%), Positives = 39/39 (100%)
 Frame = +2

Query: 245 KQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTA 361
           KQKRMYEGQRDMLYNQT+NLDQVAFASEGIKDAQQTM+A
Sbjct: 70  KQKRMYEGQRDMLYNQTYNLDQVAFASEGIKDAQQTMSA 108


>ref|XP_002280464.1| PREDICTED: charged multivesicular body protein 5 [Vitis vinifera]
           gi|297740204|emb|CBI30386.3| unnamed protein product
           [Vitis vinifera]
          Length = 237

 Score =  102 bits (255), Expect(2) = 1e-37
 Identities = 49/56 (87%), Positives = 54/56 (96%)
 Frame = +3

Query: 3   PPPSLNDASDRINKRGETVDEKIKRLDAELARYKEQIKKTRPGPAQEAVKSRAMRV 170
           PPPS+ DASDRINKRGETVDEKI RLDAEL++YKEQIK+TRPGPAQEAVK+RAMRV
Sbjct: 13  PPPSVQDASDRINKRGETVDEKITRLDAELSKYKEQIKRTRPGPAQEAVKARAMRV 68



 Score = 79.0 bits (193), Expect(2) = 1e-37
 Identities = 37/39 (94%), Positives = 39/39 (100%)
 Frame = +2

Query: 245 KQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTA 361
           KQKRMYEGQRDMLYNQTFNLDQV+FA+EGIKDAQQTMTA
Sbjct: 70  KQKRMYEGQRDMLYNQTFNLDQVSFAAEGIKDAQQTMTA 108


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