BLASTX nr result

ID: Cnidium21_contig00001882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001882
         (932 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32381.3| unnamed protein product [Vitis vinifera]               65   3e-08
gb|AFY03628.1| beta-tubulin, partial [Eucalyptus globulus]             60   7e-07
ref|XP_004172348.1| PREDICTED: tubulin beta-1 chain-like [Cucumi...    60   7e-07
ref|XP_004152649.1| PREDICTED: tubulin beta-1 chain-like [Cucumi...    60   7e-07
ref|XP_004147894.1| PREDICTED: tubulin beta-1 chain-like [Cucumi...    60   7e-07

>emb|CBI32381.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 11/77 (14%)
 Frame = +3

Query: 735 QMLPRGRAYRYPPSCGT-----P*LVIFFPI------LGSDF*LT*EKMLGESMYPLVKQ 881
           QMLPRGR +RYPP  G      P +    P+      L +        MLGE++YPLV+Q
Sbjct: 643 QMLPRGRVFRYPPGRGLSDVPMPAISQSIPVGALATALANAPPAEQRTMLGENLYPLVEQ 702

Query: 882 LEPESSAKVTGMLLEMD 932
           LEPE +AKVTGMLLEMD
Sbjct: 703 LEPEMAAKVTGMLLEMD 719


>gb|AFY03628.1| beta-tubulin, partial [Eucalyptus globulus]
          Length = 405

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = +2

Query: 5   HYTEGAELINSVLDVVRKEAENCDCLQG 88
           HYTEGAELI+SVLDVVRKEAENCDCLQG
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENCDCLQG 132


>ref|XP_004172348.1| PREDICTED: tubulin beta-1 chain-like [Cucumis sativus]
          Length = 446

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = +2

Query: 5   HYTEGAELINSVLDVVRKEAENCDCLQG 88
           HYTEGAELI+SVLDVVRKEAENCDCLQG
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENCDCLQG 132


>ref|XP_004152649.1| PREDICTED: tubulin beta-1 chain-like [Cucumis sativus]
          Length = 449

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = +2

Query: 5   HYTEGAELINSVLDVVRKEAENCDCLQG 88
           HYTEGAELI+SVLDVVRKEAENCDCLQG
Sbjct: 107 HYTEGAELIDSVLDVVRKEAENCDCLQG 134


>ref|XP_004147894.1| PREDICTED: tubulin beta-1 chain-like [Cucumis sativus]
          Length = 446

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = +2

Query: 5   HYTEGAELINSVLDVVRKEAENCDCLQG 88
           HYTEGAELI+SVLDVVRKEAENCDCLQG
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENCDCLQG 132


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