BLASTX nr result
ID: Cnidium21_contig00001880
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00001880
(561 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002322794.1| predicted protein [Populus trichocarpa] gi|2... 162 4e-45
ref|NP_566396.1| NDR1/HIN1-Like protein 1 [Arabidopsis thaliana]... 160 7e-45
gb|AAO41900.1| putative VAMP protein SEC22 [Arabidopsis thaliana] 159 1e-44
ref|XP_002884856.1| predicted protein [Arabidopsis lyrata subsp.... 160 2e-44
ref|XP_002876147.1| hypothetical protein ARALYDRAFT_485614 [Arab... 152 2e-42
>ref|XP_002322794.1| predicted protein [Populus trichocarpa] gi|222867424|gb|EEF04555.1|
predicted protein [Populus trichocarpa]
Length = 209
Score = 162 bits (411), Expect(2) = 4e-45
Identities = 77/114 (67%), Positives = 95/114 (83%)
Frame = +1
Query: 4 KPRFMIQDATIYAFKISSSPDLFTSNLQVTISSRNRNNKIGIYYDKLDIYATYRDQQITY 183
KP+F++QDAT+YAF +SS P++ TSN QVT+SSRN N+K+GIYYDKLD+YATYR+QQIT
Sbjct: 46 KPKFILQDATVYAFNVSS-PNVLTSNFQVTLSSRNPNDKVGIYYDKLDVYATYRNQQITL 104
Query: 184 FTSAPASYQGHKTDTVWSPFVYGTNVPVAPANGDALSKDQANGAISLMIKINGR 345
TS P SYQGHK VWSPF+YG+ VPV+P N ALS+DQA G + LMIKI+GR
Sbjct: 105 RTSIPTSYQGHKEIDVWSPFIYGSAVPVSPYNSVALSQDQATGTVLLMIKIDGR 158
Score = 44.3 bits (103), Expect(2) = 4e-45
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 435 YHLHVSCPVYIPFGNKNSDTTVVGSGIKYQLSQKCKVDV 551
YHL+V CP YI FG++ S V + IKYQL +C V +
Sbjct: 171 YHLNVRCPAYIQFGSRTSGIIVGENAIKYQLVTRCSVSL 209
>ref|NP_566396.1| NDR1/HIN1-Like protein 1 [Arabidopsis thaliana]
gi|6041819|gb|AAF02134.1|AC009918_6 unknown protein
[Arabidopsis thaliana]
gi|9502172|gb|AAF88021.1|AF264697_1 NDR1/HIN1-Like
protein 1 [Arabidopsis thaliana]
gi|21595601|gb|AAM66116.1| harpin-induced protein-like
[Arabidopsis thaliana] gi|56381911|gb|AAV85674.1|
At3g11660 [Arabidopsis thaliana]
gi|58331799|gb|AAW70397.1| At3g11660 [Arabidopsis
thaliana] gi|332641559|gb|AEE75080.1| NDR1/HIN1-Like
protein 1 [Arabidopsis thaliana]
Length = 209
Score = 160 bits (404), Expect(2) = 7e-45
Identities = 73/115 (63%), Positives = 94/115 (81%), Gaps = 1/115 (0%)
Frame = +1
Query: 4 KPRFMIQDATIYAFKISSSP-DLFTSNLQVTISSRNRNNKIGIYYDKLDIYATYRDQQIT 180
KPRF++QDAT+YAF +S +P +L TSN Q+T+SSRN NNKIGIYYD+LD+YATYR QQIT
Sbjct: 44 KPRFILQDATVYAFNVSGNPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQIT 103
Query: 181 YFTSAPASYQGHKTDTVWSPFVYGTNVPVAPANGDALSKDQANGAISLMIKINGR 345
+ TS P +YQGHK +WSPFVYGT+VP+AP NG +L D+ NG + L+I+ +GR
Sbjct: 104 FPTSIPPTYQGHKDVDIWSPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGR 158
Score = 46.2 bits (108), Expect(2) = 7e-45
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +3
Query: 435 YHLHVSCPVYIPFGNKNSDTTVVGSGIKYQLSQKCKVDV 551
YHLHV CP YI FGNK + V + +KY + C V V
Sbjct: 171 YHLHVKCPAYINFGNKANGVIVGDNAVKYTFTTSCSVSV 209
>gb|AAO41900.1| putative VAMP protein SEC22 [Arabidopsis thaliana]
Length = 209
Score = 159 bits (402), Expect(2) = 1e-44
Identities = 72/115 (62%), Positives = 94/115 (81%), Gaps = 1/115 (0%)
Frame = +1
Query: 4 KPRFMIQDATIYAFKISSSP-DLFTSNLQVTISSRNRNNKIGIYYDKLDIYATYRDQQIT 180
KPRF++QDAT+YAF +S +P ++ TSN Q+T+SSRN NNKIGIYYD+LD+YATYR QQIT
Sbjct: 44 KPRFILQDATVYAFNVSGNPPNILTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQIT 103
Query: 181 YFTSAPASYQGHKTDTVWSPFVYGTNVPVAPANGDALSKDQANGAISLMIKINGR 345
+ TS P +YQGHK +WSPFVYGT+VP+AP NG +L D+ NG + L+I+ +GR
Sbjct: 104 FPTSIPPTYQGHKDVDIWSPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGR 158
Score = 46.2 bits (108), Expect(2) = 1e-44
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +3
Query: 435 YHLHVSCPVYIPFGNKNSDTTVVGSGIKYQLSQKCKVDV 551
YHLHV CP YI FGNK + V + +KY + C V V
Sbjct: 171 YHLHVKCPAYINFGNKANGVIVGDNAVKYTFTTSCSVSV 209
>ref|XP_002884856.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330696|gb|EFH61115.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 202
Score = 160 bits (406), Expect(2) = 2e-44
Identities = 73/115 (63%), Positives = 94/115 (81%), Gaps = 1/115 (0%)
Frame = +1
Query: 4 KPRFMIQDATIYAFKISSSP-DLFTSNLQVTISSRNRNNKIGIYYDKLDIYATYRDQQIT 180
KPRF++QDAT+YAF +S +P +L TSN Q+T+SSRN N+KIG+YYD+LD+YATYR QQIT
Sbjct: 37 KPRFLLQDATVYAFNVSGNPPNLITSNFQITLSSRNPNDKIGVYYDRLDVYATYRSQQIT 96
Query: 181 YFTSAPASYQGHKTDTVWSPFVYGTNVPVAPANGDALSKDQANGAISLMIKINGR 345
+ TS P +YQGHK +WSPFVYGT+VP+AP NG L D+ NGAI L+I+ +GR
Sbjct: 97 FRTSIPPTYQGHKEVNIWSPFVYGTSVPIAPFNGVGLDDDKDNGAIMLIIRADGR 151
Score = 43.9 bits (102), Expect(2) = 2e-44
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 435 YHLHVSCPVYIPFGNKNSDTTVVGSGIKYQLSQKCKVDV 551
YHL+V CP YI FGNK + + + +KY + C V V
Sbjct: 164 YHLYVKCPAYINFGNKAAGVIIGDNAVKYTFTSSCSVSV 202
>ref|XP_002876147.1| hypothetical protein ARALYDRAFT_485614 [Arabidopsis lyrata subsp.
lyrata] gi|297321985|gb|EFH52406.1| hypothetical protein
ARALYDRAFT_485614 [Arabidopsis lyrata subsp. lyrata]
Length = 208
Score = 152 bits (385), Expect(2) = 2e-42
Identities = 71/114 (62%), Positives = 90/114 (78%)
Frame = +1
Query: 4 KPRFMIQDATIYAFKISSSPDLFTSNLQVTISSRNRNNKIGIYYDKLDIYATYRDQQITY 183
KPRF++QDAT++AF +S P+L TSN Q+TI+SRN N+KIGIYYD+L +YATYR+QQIT
Sbjct: 45 KPRFVLQDATVFAFNLSQ-PNLLTSNFQITIASRNPNSKIGIYYDRLHVYATYRNQQITL 103
Query: 184 FTSAPASYQGHKTDTVWSPFVYGTNVPVAPANGDALSKDQANGAISLMIKINGR 345
T+ P +YQGHK D VWSPFVYGT VP+AP N AL +Q G + LMI+ +GR
Sbjct: 104 RTAIPPTYQGHKEDNVWSPFVYGTAVPIAPYNSVALGDEQGRGFVGLMIRADGR 157
Score = 45.4 bits (106), Expect(2) = 2e-42
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 435 YHLHVSCPVYIPFGNKNSDTTVVGSGIKYQLSQKCKVDV 551
YH+HV CP YI GNK + V + +KY L KC V+V
Sbjct: 170 YHIHVRCPAYINLGNKAAGVLVGDNAVKYTLVTKCSVNV 208