BLASTX nr result

ID: Cnidium21_contig00001875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001875
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526949.1| PREDICTED: F-box/LRR-repeat protein At5g6352...   152   3e-35
ref|XP_003523154.1| PREDICTED: F-box/LRR-repeat protein At5g6352...   150   8e-35
ref|XP_003602796.1| F-box/LRR-repeat protein [Medicago truncatul...   150   8e-35
ref|XP_002283895.2| PREDICTED: F-box/LRR-repeat protein At5g6352...   146   2e-33
emb|CAN79767.1| hypothetical protein VITISV_019403 [Vitis vinifera]   146   2e-33

>ref|XP_003526949.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Glycine max]
          Length = 540

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/145 (51%), Positives = 104/145 (71%)
 Frame = +3

Query: 6   TKTKVCEMGESTRKSITTIDSIGDDLLRNILNRLPALHFASASCVNRSWHRVCDSVLSAP 185
           ++ K   M +++  + T++  + +DLL+NIL RLP+LHFASA+CV++SW+ +C  +LS P
Sbjct: 11  SRRKSSTMVKASTDANTSLSMLNEDLLQNILARLPSLHFASAACVSKSWNSLCSRILSRP 70

Query: 186 KLATALSLNPSIQDAVEEVFNKVFAEPIRPHFAIVAIGQSFEMHVALQLITKKLGTAIPI 365
           KL++A+SLNPS+ DAV EV +KV +EPIRPHFAI  IG  F     L LI K LG  IP+
Sbjct: 71  KLSSAISLNPSLPDAVNEVVHKVLSEPIRPHFAIANIGTGFNTAKTLCLIRKSLGFNIPV 130

Query: 366 ICTAAFGLMGRDVATNSFKEIPQWG 440
           I T A G+MGRD  T+ FKE+ +WG
Sbjct: 131 IVTVANGIMGRDAVTDEFKEV-KWG 154


>ref|XP_003523154.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Glycine max]
          Length = 538

 Score =  150 bits (380), Expect = 8e-35
 Identities = 72/129 (55%), Positives = 97/129 (75%)
 Frame = +3

Query: 54  TTIDSIGDDLLRNILNRLPALHFASASCVNRSWHRVCDSVLSAPKLATALSLNPSIQDAV 233
           T +  + +DLL+NIL RLPALHFASA+CV++SW+ +C+ +L+ PKL++A+SLNPS+ DAV
Sbjct: 26  TNLSMLNEDLLQNILARLPALHFASAACVSKSWNSLCNRILTRPKLSSAISLNPSLPDAV 85

Query: 234 EEVFNKVFAEPIRPHFAIVAIGQSFEMHVALQLITKKLGTAIPIICTAAFGLMGRDVATN 413
            EV +KV +EPIRPHFAI  IG  F     L LI + LG+ IP+I T A G+MGRD  T+
Sbjct: 86  NEVVHKVLSEPIRPHFAIANIGTGFSTAKTLCLIRQSLGSNIPVIVTVASGIMGRDAVTD 145

Query: 414 SFKEIPQWG 440
            FKE+ +WG
Sbjct: 146 EFKEV-KWG 153


>ref|XP_003602796.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355491844|gb|AES73047.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 579

 Score =  150 bits (380), Expect = 8e-35
 Identities = 73/137 (53%), Positives = 103/137 (75%)
 Frame = +3

Query: 30  GESTRKSITTIDSIGDDLLRNILNRLPALHFASASCVNRSWHRVCDSVLSAPKLATALSL 209
           G+S+   IT I+ + DDLL NI  RLPA+ FASA+CVN+SW+ VC+ ++S PKLA+ALSL
Sbjct: 16  GKSSIDPITGINVLSDDLLLNIFTRLPAISFASATCVNKSWNSVCNRIISRPKLASALSL 75

Query: 210 NPSIQDAVEEVFNKVFAEPIRPHFAIVAIGQSFEMHVALQLITKKLGTAIPIICTAAFGL 389
           NPS++DAV EV +KV +EPIRP+FAIV IG  F+    L+L+ +++G  IP++ T   G+
Sbjct: 76  NPSLRDAVNEVVDKVLSEPIRPYFAIVNIGCGFDPSKILRLVKRRVGFNIPVVVTVNNGI 135

Query: 390 MGRDVATNSFKEIPQWG 440
           +GRD  T+ FKE+ +WG
Sbjct: 136 IGRDAVTDEFKEV-KWG 151


>ref|XP_002283895.2| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Vitis vinifera]
           gi|297734433|emb|CBI15680.3| unnamed protein product
           [Vitis vinifera]
          Length = 527

 Score =  146 bits (368), Expect = 2e-33
 Identities = 72/128 (56%), Positives = 93/128 (72%)
 Frame = +3

Query: 69  IGDDLLRNILNRLPALHFASASCVNRSWHRVCDSVLSAPKLATALSLNPSIQDAVEEVFN 248
           + +DLL+NIL+RLPAL FA+A CV+RSW R    VLS PKLA+A+SLNPS QDAV+EV +
Sbjct: 12  LSEDLLQNILSRLPALSFANAGCVSRSWRRAAGDVLSRPKLASAISLNPSFQDAVKEVLD 71

Query: 249 KVFAEPIRPHFAIVAIGQSFEMHVALQLITKKLGTAIPIICTAAFGLMGRDVATNSFKEI 428
            V + PIRPHFAI  IG  F +    +LITKKLG+A P+I + A G++G D  T  FKE+
Sbjct: 72  SVLSRPIRPHFAIACIGLKFSLERTHKLITKKLGSATPVITSVARGIIGSDAITEEFKEV 131

Query: 429 PQWGEEEE 452
            +WG + E
Sbjct: 132 -KWGVDVE 138


>emb|CAN79767.1| hypothetical protein VITISV_019403 [Vitis vinifera]
          Length = 527

 Score =  146 bits (368), Expect = 2e-33
 Identities = 72/128 (56%), Positives = 93/128 (72%)
 Frame = +3

Query: 69  IGDDLLRNILNRLPALHFASASCVNRSWHRVCDSVLSAPKLATALSLNPSIQDAVEEVFN 248
           + +DLL+NIL+RLPAL FA+A CV+RSW R    VLS PKLA+A+SLNPS QDAV+EV +
Sbjct: 12  LSEDLLQNILSRLPALSFANAGCVSRSWRRAAGDVLSRPKLASAISLNPSFQDAVKEVLD 71

Query: 249 KVFAEPIRPHFAIVAIGQSFEMHVALQLITKKLGTAIPIICTAAFGLMGRDVATNSFKEI 428
            V + PIRPHFAI  IG  F +    +LITKKLG+A P+I + A G++G D  T  FKE+
Sbjct: 72  SVLSRPIRPHFAIACIGLKFSLERTHKLITKKLGSATPVITSVARGIIGSDAITEEFKEV 131

Query: 429 PQWGEEEE 452
            +WG + E
Sbjct: 132 -KWGVDVE 138


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