BLASTX nr result

ID: Cnidium21_contig00001858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001858
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305746.1| predicted protein [Populus trichocarpa] gi|1...   207   1e-51
ref|XP_002268801.1| PREDICTED: 60S ribosomal protein L36-3 isofo...   207   2e-51
ref|XP_002317423.1| predicted protein [Populus trichocarpa] gi|2...   207   2e-51
gb|AFK38454.1| unknown [Lotus japonicus]                              206   3e-51
ref|XP_004140771.1| PREDICTED: 60S ribosomal protein L36-2-like ...   206   3e-51

>ref|XP_002305746.1| predicted protein [Populus trichocarpa] gi|118484529|gb|ABK94139.1|
           unknown [Populus trichocarpa]
           gi|118487398|gb|ABK95527.1| unknown [Populus
           trichocarpa] gi|222848710|gb|EEE86257.1| predicted
           protein [Populus trichocarpa]
          Length = 110

 Score =  207 bits (528), Expect = 1e-51
 Identities = 105/110 (95%), Positives = 106/110 (96%)
 Frame = -2

Query: 635 MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFAPYEKRI 456
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKR  FVR+LIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 455 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGTEKKK 306
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRA GG EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAAGGAEKKK 110


>ref|XP_002268801.1| PREDICTED: 60S ribosomal protein L36-3 isoform 2 [Vitis vinifera]
           gi|225464489|ref|XP_002268754.1| PREDICTED: 60S
           ribosomal protein L36-3 isoform 1 [Vitis vinifera]
           gi|302143845|emb|CBI22706.3| unnamed protein product
           [Vitis vinifera]
          Length = 110

 Score =  207 bits (526), Expect = 2e-51
 Identities = 104/110 (94%), Positives = 106/110 (96%)
 Frame = -2

Query: 635 MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFAPYEKRI 456
           MAPKQPNTGLFVGLNKGHIVTKKEL PRPSDRKGKTSKR HFVRNLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 60

Query: 455 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGTEKKK 306
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKMR+GG  EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSGGVGEKKK 110


>ref|XP_002317423.1| predicted protein [Populus trichocarpa] gi|222860488|gb|EEE98035.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score =  207 bits (526), Expect = 2e-51
 Identities = 104/110 (94%), Positives = 106/110 (96%)
 Frame = -2

Query: 635 MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFAPYEKRI 456
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKR  FVR+LIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVQFVRSLIREVAGFAPYEKRI 60

Query: 455 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGTEKKK 306
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSNVLRKMRA GG EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMRAAGGGEKKK 110


>gb|AFK38454.1| unknown [Lotus japonicus]
          Length = 110

 Score =  206 bits (525), Expect = 3e-51
 Identities = 102/110 (92%), Positives = 107/110 (97%)
 Frame = -2

Query: 635 MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFAPYEKRI 456
           MAPKQP+TGLFVGLNKGH+VTKKELAPRPSDRKGKTSKR HFVR+LIREVAGFAPYEKRI
Sbjct: 1   MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRSLIREVAGFAPYEKRI 60

Query: 455 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGTEKKK 306
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSNVLRKMRAGG  +KKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMRAGGAGDKKK 110


>ref|XP_004140771.1| PREDICTED: 60S ribosomal protein L36-2-like [Cucumis sativus]
           gi|449469345|ref|XP_004152381.1| PREDICTED: 60S
           ribosomal protein L36-2-like [Cucumis sativus]
           gi|449518411|ref|XP_004166235.1| PREDICTED: 60S
           ribosomal protein L36-2-like [Cucumis sativus]
           gi|449528180|ref|XP_004171084.1| PREDICTED: 60S
           ribosomal protein L36-2-like [Cucumis sativus]
           gi|307136494|gb|ADN34294.1| 60S ribosomal protein l36e
           [Cucumis melo subsp. melo]
          Length = 110

 Score =  206 bits (525), Expect = 3e-51
 Identities = 104/110 (94%), Positives = 107/110 (97%)
 Frame = -2

Query: 635 MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFAPYEKRI 456
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKR  FVR+LIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 455 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGTEKKK 306
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKMRAGGG EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110


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