BLASTX nr result

ID: Cnidium21_contig00001848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001848
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis...   233   1e-59
ref|XP_003612449.1| 60S ribosomal protein L4-1 [Medicago truncat...   233   1e-59
ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis v...   231   5e-59
ref|XP_004142108.1| PREDICTED: 60S ribosomal protein L4-like [Cu...   229   1e-58
ref|XP_003537249.1| PREDICTED: 60S ribosomal protein L4-1-like i...   229   2e-58

>ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis vinifera]
          Length = 405

 Score =  233 bits (594), Expect = 1e-59
 Identities = 105/128 (82%), Positives = 123/128 (96%)
 Frame = +2

Query: 8   MAASSRPLVSIQTLESDMSTDGPNSLPLPDVMKSSIRPDVVSFVHSEMSNNSRQPYAVSR 187
           MAA++RPLV++Q L+SDM+TDG N++PLPDVMK+SIRPD+V+FVHS +S NSRQPYAVSR
Sbjct: 1   MAAAARPLVTVQVLKSDMATDGGNAVPLPDVMKASIRPDIVNFVHSNISKNSRQPYAVSR 60

Query: 188 KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTRIWRKWHSRIN 367
           +AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWR+WH +IN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 368 INQKRFAV 391
           +NQKR+AV
Sbjct: 121 VNQKRYAV 128


>ref|XP_003612449.1| 60S ribosomal protein L4-1 [Medicago truncatula]
           gi|217071858|gb|ACJ84289.1| unknown [Medicago
           truncatula] gi|355513784|gb|AES95407.1| 60S ribosomal
           protein L4-1 [Medicago truncatula]
           gi|388503734|gb|AFK39933.1| unknown [Medicago
           truncatula]
          Length = 408

 Score =  233 bits (594), Expect = 1e-59
 Identities = 107/127 (84%), Positives = 121/127 (95%)
 Frame = +2

Query: 11  AASSRPLVSIQTLESDMSTDGPNSLPLPDVMKSSIRPDVVSFVHSEMSNNSRQPYAVSRK 190
           AA++RPLV+IQTLES+MSTD PN+LP+PDVM++SIRPD+V+FVHS +S NSRQPYAVSRK
Sbjct: 5   AAAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRK 64

Query: 191 AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTRIWRKWHSRINI 370
           AGHQTSAESWGTGRAVSRIPRV GGGTHRAGQ AFGNMCRGGRMFAPTRIWRKWH +IN+
Sbjct: 65  AGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINV 124

Query: 371 NQKRFAV 391
           NQKR+AV
Sbjct: 125 NQKRYAV 131


>ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
          Length = 406

 Score =  231 bits (589), Expect = 5e-59
 Identities = 104/127 (81%), Positives = 122/127 (96%)
 Frame = +2

Query: 11  AASSRPLVSIQTLESDMSTDGPNSLPLPDVMKSSIRPDVVSFVHSEMSNNSRQPYAVSRK 190
           AA++RPLV++Q L+SDM+TDG N++PLPDVMK+SIRPD+V+FVHS +S NSRQPYAVSR+
Sbjct: 3   AAAARPLVTVQVLKSDMATDGGNAVPLPDVMKASIRPDIVTFVHSNISKNSRQPYAVSRR 62

Query: 191 AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTRIWRKWHSRINI 370
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWR+WH +IN+
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 122

Query: 371 NQKRFAV 391
           NQKR+AV
Sbjct: 123 NQKRYAV 129


>ref|XP_004142108.1| PREDICTED: 60S ribosomal protein L4-like [Cucumis sativus]
           gi|449520008|ref|XP_004167026.1| PREDICTED: 60S
           ribosomal protein L4-like [Cucumis sativus]
          Length = 405

 Score =  229 bits (585), Expect = 1e-58
 Identities = 104/128 (81%), Positives = 121/128 (94%)
 Frame = +2

Query: 8   MAASSRPLVSIQTLESDMSTDGPNSLPLPDVMKSSIRPDVVSFVHSEMSNNSRQPYAVSR 187
           MAA++RPLVS+Q+LE DM+TD   ++PLPDVMK+SIRPD+VSFVHS +S NSRQPYAVS+
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 188 KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTRIWRKWHSRIN 367
           +AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWR+WH +IN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 368 INQKRFAV 391
           +NQKR+AV
Sbjct: 121 VNQKRYAV 128


>ref|XP_003537249.1| PREDICTED: 60S ribosomal protein L4-1-like isoform 2 [Glycine max]
          Length = 371

 Score =  229 bits (583), Expect = 2e-58
 Identities = 103/128 (80%), Positives = 121/128 (94%)
 Frame = +2

Query: 8   MAASSRPLVSIQTLESDMSTDGPNSLPLPDVMKSSIRPDVVSFVHSEMSNNSRQPYAVSR 187
           MAA++RPLV++Q L+SDM+TD   ++P+PDVMKSSIRPD+V+FVHS +S NSRQPYAVSR
Sbjct: 1   MAAAARPLVTVQALDSDMATDASATVPIPDVMKSSIRPDIVNFVHSNISKNSRQPYAVSR 60

Query: 188 KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTRIWRKWHSRIN 367
           +AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPT+IWR+WH +IN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 368 INQKRFAV 391
           +NQKR+AV
Sbjct: 121 VNQKRYAV 128


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