BLASTX nr result
ID: Cnidium21_contig00001722
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00001722 (336 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003588536.1| Rhomboid family protein (ISS) [Medicago trun... 66 3e-09 ref|XP_002516572.1| conserved hypothetical protein [Ricinus comm... 57 2e-06 gb|AFK40428.1| unknown [Lotus japonicus] 55 8e-06 ref|NP_001240965.1| uncharacterized protein LOC100781449 [Glycin... 55 8e-06 emb|CBI20892.3| unnamed protein product [Vitis vinifera] 55 8e-06 >ref|XP_003588536.1| Rhomboid family protein (ISS) [Medicago truncatula] gi|355477584|gb|AES58787.1| Rhomboid family protein (ISS) [Medicago truncatula] Length = 302 Score = 66.2 bits (160), Expect = 3e-09 Identities = 34/51 (66%), Positives = 38/51 (74%), Gaps = 2/51 (3%) Frame = -2 Query: 149 PKSSLFLCQIKPSDSDMISQLELGKPE--PRRPVKQVNGIFWILLLNIGIF 3 P SL LC + SDMISQLE+ KPE R PVK+VNGIFWI+LLNIGIF Sbjct: 56 PSPSLTLCNNNNNKSDMISQLEVAKPELNKREPVKRVNGIFWIILLNIGIF 106 >ref|XP_002516572.1| conserved hypothetical protein [Ricinus communis] gi|223544392|gb|EEF45913.1| conserved hypothetical protein [Ricinus communis] Length = 308 Score = 57.0 bits (136), Expect = 2e-06 Identities = 31/47 (65%), Positives = 35/47 (74%), Gaps = 1/47 (2%) Frame = -2 Query: 140 SLFLCQIKPSDSDMISQLELGKPEPRR-PVKQVNGIFWILLLNIGIF 3 S F+C K S SDMI LEL KPE RR P KQ NGIFWI+LLN+GI+ Sbjct: 74 SRFVC--KMSGSDMIRPLELDKPEGRRKPQKQANGIFWIILLNLGIY 118 >gb|AFK40428.1| unknown [Lotus japonicus] Length = 284 Score = 54.7 bits (130), Expect = 8e-06 Identities = 25/40 (62%), Positives = 33/40 (82%), Gaps = 1/40 (2%) Frame = -2 Query: 119 KPSDSDMISQLELGKPE-PRRPVKQVNGIFWILLLNIGIF 3 K +SD++ QLELGKPE R+P K+ +GIFW++LLNIGIF Sbjct: 66 KIKNSDLVPQLELGKPENKRKPEKRASGIFWVILLNIGIF 105 >ref|NP_001240965.1| uncharacterized protein LOC100781449 [Glycine max] gi|255635279|gb|ACU17993.1| unknown [Glycine max] Length = 281 Score = 54.7 bits (130), Expect = 8e-06 Identities = 26/36 (72%), Positives = 32/36 (88%), Gaps = 1/36 (2%) Frame = -2 Query: 107 SDMISQLELGKPEPR-RPVKQVNGIFWILLLNIGIF 3 SD++SQLELGKPE + +P K+VNGIFWI+LLNI IF Sbjct: 69 SDIMSQLELGKPEQKGKPEKRVNGIFWIILLNIAIF 104 >emb|CBI20892.3| unnamed protein product [Vitis vinifera] Length = 293 Score = 54.7 bits (130), Expect = 8e-06 Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 1/53 (1%) Frame = -2 Query: 158 PVHPKSSLFLCQIKPSDSDMISQLELGKPEPR-RPVKQVNGIFWILLLNIGIF 3 P+ S F+C K + SD+ SQ+ELGK + +P +QVNGIFWI+LLN+GIF Sbjct: 51 PISAAPSRFVC--KMNGSDLTSQMELGKSGGKWKPQRQVNGIFWIILLNLGIF 101