BLASTX nr result

ID: Cnidium21_contig00001722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001722
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588536.1| Rhomboid family protein (ISS) [Medicago trun...    66   3e-09
ref|XP_002516572.1| conserved hypothetical protein [Ricinus comm...    57   2e-06
gb|AFK40428.1| unknown [Lotus japonicus]                               55   8e-06
ref|NP_001240965.1| uncharacterized protein LOC100781449 [Glycin...    55   8e-06
emb|CBI20892.3| unnamed protein product [Vitis vinifera]               55   8e-06

>ref|XP_003588536.1| Rhomboid family protein (ISS) [Medicago truncatula]
           gi|355477584|gb|AES58787.1| Rhomboid family protein
           (ISS) [Medicago truncatula]
          Length = 302

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/51 (66%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
 Frame = -2

Query: 149 PKSSLFLCQIKPSDSDMISQLELGKPE--PRRPVKQVNGIFWILLLNIGIF 3
           P  SL LC    + SDMISQLE+ KPE   R PVK+VNGIFWI+LLNIGIF
Sbjct: 56  PSPSLTLCNNNNNKSDMISQLEVAKPELNKREPVKRVNGIFWIILLNIGIF 106


>ref|XP_002516572.1| conserved hypothetical protein [Ricinus communis]
           gi|223544392|gb|EEF45913.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 308

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/47 (65%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = -2

Query: 140 SLFLCQIKPSDSDMISQLELGKPEPRR-PVKQVNGIFWILLLNIGIF 3
           S F+C  K S SDMI  LEL KPE RR P KQ NGIFWI+LLN+GI+
Sbjct: 74  SRFVC--KMSGSDMIRPLELDKPEGRRKPQKQANGIFWIILLNLGIY 118


>gb|AFK40428.1| unknown [Lotus japonicus]
          Length = 284

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/40 (62%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -2

Query: 119 KPSDSDMISQLELGKPE-PRRPVKQVNGIFWILLLNIGIF 3
           K  +SD++ QLELGKPE  R+P K+ +GIFW++LLNIGIF
Sbjct: 66  KIKNSDLVPQLELGKPENKRKPEKRASGIFWVILLNIGIF 105


>ref|NP_001240965.1| uncharacterized protein LOC100781449 [Glycine max]
           gi|255635279|gb|ACU17993.1| unknown [Glycine max]
          Length = 281

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/36 (72%), Positives = 32/36 (88%), Gaps = 1/36 (2%)
 Frame = -2

Query: 107 SDMISQLELGKPEPR-RPVKQVNGIFWILLLNIGIF 3
           SD++SQLELGKPE + +P K+VNGIFWI+LLNI IF
Sbjct: 69  SDIMSQLELGKPEQKGKPEKRVNGIFWIILLNIAIF 104


>emb|CBI20892.3| unnamed protein product [Vitis vinifera]
          Length = 293

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
 Frame = -2

Query: 158 PVHPKSSLFLCQIKPSDSDMISQLELGKPEPR-RPVKQVNGIFWILLLNIGIF 3
           P+    S F+C  K + SD+ SQ+ELGK   + +P +QVNGIFWI+LLN+GIF
Sbjct: 51  PISAAPSRFVC--KMNGSDLTSQMELGKSGGKWKPQRQVNGIFWIILLNLGIF 101


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