BLASTX nr result

ID: Cnidium21_contig00001713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001713
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320843.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
gb|ABK95729.1| unknown [Populus trichocarpa]                          162   3e-38
ref|XP_002511952.1| Thylakoid membrane phosphoprotein 14 kDa, ch...   155   2e-36
ref|XP_003548598.1| PREDICTED: uncharacterized protein At4g01150...   154   9e-36
ref|XP_003548597.1| PREDICTED: uncharacterized protein At4g01150...   154   9e-36

>ref|XP_002320843.1| predicted protein [Populus trichocarpa] gi|222861616|gb|EEE99158.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score =  162 bits (409), Expect = 3e-38
 Identities = 82/117 (70%), Positives = 92/117 (78%)
 Frame = +2

Query: 8   LSSSVSRRHAQFQIKAASEESTPSDDGEILTDLKEKWDAVENKSTXXXXXXXXXXXXXXS 187
           L++S SRR A FQ +A+S E +P D  EI TDLKEKWDAVENKST              S
Sbjct: 35  LTASESRRFAPFQTRASSSEESPVDANEIFTDLKEKWDAVENKSTVIIYGGGAVVAVWLS 94

Query: 188 ATLVGAINSIPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE 358
           + L+GA+NS+PLLPKI+ELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE
Sbjct: 95  SILIGAVNSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE 151


>gb|ABK95729.1| unknown [Populus trichocarpa]
          Length = 164

 Score =  162 bits (409), Expect = 3e-38
 Identities = 82/117 (70%), Positives = 92/117 (78%)
 Frame = +2

Query: 8   LSSSVSRRHAQFQIKAASEESTPSDDGEILTDLKEKWDAVENKSTXXXXXXXXXXXXXXS 187
           L++S SRR A FQ +A+S E +P D  EI TDLKEKWDAVENKST              S
Sbjct: 48  LTASESRRFAPFQTRASSSEESPVDANEIFTDLKEKWDAVENKSTVIIYGGGAVVAVWLS 107

Query: 188 ATLVGAINSIPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE 358
           + L+GA+NS+PLLPKI+ELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE
Sbjct: 108 SILIGAVNSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE 164


>ref|XP_002511952.1| Thylakoid membrane phosphoprotein 14 kDa, chloroplast precursor,
           putative [Ricinus communis] gi|223549132|gb|EEF50621.1|
           Thylakoid membrane phosphoprotein 14 kDa, chloroplast
           precursor, putative [Ricinus communis]
          Length = 167

 Score =  155 bits (393), Expect = 2e-36
 Identities = 79/114 (69%), Positives = 90/114 (78%)
 Frame = +2

Query: 17  SVSRRHAQFQIKAASEESTPSDDGEILTDLKEKWDAVENKSTXXXXXXXXXXXXXXSATL 196
           S SRR +  QI+A+SEES P D GE+ TDLK +WDA+ENKST              S+ +
Sbjct: 54  SASRRVSLLQIRASSEESAPVDAGELFTDLKARWDALENKSTVVLYGGGAIVAVWLSSIV 113

Query: 197 VGAINSIPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE 358
           VGAINS+PLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIE+LKKKIAG+E
Sbjct: 114 VGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGSE 167


>ref|XP_003548598.1| PREDICTED: uncharacterized protein At4g01150, chloroplastic-like
           [Glycine max]
          Length = 153

 Score =  154 bits (388), Expect = 9e-36
 Identities = 79/114 (69%), Positives = 88/114 (77%)
 Frame = +2

Query: 17  SVSRRHAQFQIKAASEESTPSDDGEILTDLKEKWDAVENKSTXXXXXXXXXXXXXXSATL 196
           SVSR+ +  Q +A+SEES+  D  E+ TDLKEKWDA+ENKST              S+ L
Sbjct: 40  SVSRKSSLLQTRASSEESSSVDANEVFTDLKEKWDALENKSTVLFYGGGALVAVWLSSIL 99

Query: 197 VGAINSIPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE 358
           V AINS+PLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKI GTE
Sbjct: 100 VSAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKITGTE 153


>ref|XP_003548597.1| PREDICTED: uncharacterized protein At4g01150, chloroplastic-like
           [Glycine max]
          Length = 163

 Score =  154 bits (388), Expect = 9e-36
 Identities = 79/114 (69%), Positives = 88/114 (77%)
 Frame = +2

Query: 17  SVSRRHAQFQIKAASEESTPSDDGEILTDLKEKWDAVENKSTXXXXXXXXXXXXXXSATL 196
           SVSR+ +  Q +A+SEES+  D  E+ TDLKEKWDA+ENKST              S+ L
Sbjct: 50  SVSRKSSLLQTRASSEESSSVDANEVFTDLKEKWDALENKSTVLFYGGGALVAVWLSSIL 109

Query: 197 VGAINSIPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE 358
           V AINS+PLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKI GTE
Sbjct: 110 VSAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKITGTE 163


Top