BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001708
         (974 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [...   143   7e-32
ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein ...   130   6e-28
gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamari...   129   8e-28
ref|XP_002328863.1| predicted protein [Populus trichocarpa] gi|1...   127   3e-27
gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sa...   126   7e-27

>ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 134

 Score =  143 bits (360), Expect = 7e-32
 Identities = 79/118 (66%), Positives = 87/118 (73%), Gaps = 3/118 (2%)
 Frame = -2

Query: 898 MAFYNRIGSLISQT---HMKTSVPSMLNAIRGMASSKLFVGGLSYNTNDDSLRDAFSSFG 728
           MAF N+IGSL+ Q+   + K  V SMLN+IR M+SSKLF+GGLSY TNDDSL+DAFS FG
Sbjct: 1   MAFCNKIGSLVRQSVAQNGKVPVSSMLNSIRCMSSSKLFIGGLSYGTNDDSLKDAFSGFG 60

Query: 727 DVTEARVITDRDTQRSRGFGFVXXXXXXXXXXXXXAMDGQELEGRNIRVSEATERPPR 554
           DV  ARVITDRDT RSRGFGFV             AMDGQEL GRNIRVS ATER PR
Sbjct: 61  DVVTARVITDRDTGRSRGFGFVDFSSVDSASSALSAMDGQELHGRNIRVSYATERAPR 118


>ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
           vinifera] gi|147833478|emb|CAN75185.1| hypothetical
           protein VITISV_001912 [Vitis vinifera]
           gi|298205231|emb|CBI17290.3| unnamed protein product
           [Vitis vinifera]
          Length = 152

 Score =  130 bits (326), Expect = 6e-28
 Identities = 72/121 (59%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
 Frame = -2

Query: 898 MAFYNRIGSLISQTHMKTSVP-------SMLNAIRGMASSKLFVGGLSYNTNDDSLRDAF 740
           MAF NR G+L+ Q+  + S         ++LN+IR M+S+KLF+GGLSY T+D SL+DAF
Sbjct: 1   MAFCNRFGNLLRQSISQNSASKGQGSMGALLNSIRCMSSAKLFIGGLSYGTDDQSLKDAF 60

Query: 739 SSFGDVTEARVITDRDTQRSRGFGFVXXXXXXXXXXXXXAMDGQELEGRNIRVSEATERP 560
           SSFGDV EARVITDRDT RSRGFGFV             AMDGQEL GRNIRVS A ER 
Sbjct: 61  SSFGDVVEARVITDRDTGRSRGFGFVNFTSDDSASSALSAMDGQELNGRNIRVSYANERT 120

Query: 559 P 557
           P
Sbjct: 121 P 121


>gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
          Length = 143

 Score =  129 bits (325), Expect = 8e-28
 Identities = 72/114 (63%), Positives = 85/114 (74%), Gaps = 2/114 (1%)
 Frame = -2

Query: 898 MAFYNRIGSLISQTHMKTSVP--SMLNAIRGMASSKLFVGGLSYNTNDDSLRDAFSSFGD 725
           MAF NRIGSLI QT  + S P  SMLN+IR M+SS+LFVGGLS+ T+D SL+DAFSSFG+
Sbjct: 1   MAFCNRIGSLIRQTVSQNSAPIDSMLNSIRCMSSSRLFVGGLSWGTDDQSLKDAFSSFGE 60

Query: 724 VTEARVITDRDTQRSRGFGFVXXXXXXXXXXXXXAMDGQELEGRNIRVSEATER 563
           VT+A+VITDR+T RSRGFGFV             +MDG EL GR+IRVS A ER
Sbjct: 61  VTDAKVITDRETGRSRGFGFVNFVDNEAAGSALSSMDGVELNGRSIRVSFAQER 114


>ref|XP_002328863.1| predicted protein [Populus trichocarpa] gi|118482403|gb|ABK93124.1|
           unknown [Populus trichocarpa]
           gi|222839293|gb|EEE77630.1| predicted protein [Populus
           trichocarpa]
          Length = 131

 Score =  127 bits (320), Expect = 3e-27
 Identities = 68/115 (59%), Positives = 86/115 (74%), Gaps = 3/115 (2%)
 Frame = -2

Query: 898 MAFYNRIGSLISQT---HMKTSVPSMLNAIRGMASSKLFVGGLSYNTNDDSLRDAFSSFG 728
           MAF+N+ GSL+ Q+   + +  + SMLN+IR M+SSKLF+GGL+++T+D SL+DAFS FG
Sbjct: 1   MAFFNKFGSLVRQSVSQNGQVPMASMLNSIRCMSSSKLFIGGLAWSTDDQSLKDAFSGFG 60

Query: 727 DVTEARVITDRDTQRSRGFGFVXXXXXXXXXXXXXAMDGQELEGRNIRVSEATER 563
           +VTEARVITDRDT RSRGFGFV             AMDGQEL GRNIRV  AT++
Sbjct: 61  EVTEARVITDRDTGRSRGFGFVSYESTESASEALSAMDGQELGGRNIRVGYATDK 115


>gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
           gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding
           protein [Pisum sativum]
          Length = 146

 Score =  126 bits (317), Expect = 7e-27
 Identities = 68/116 (58%), Positives = 84/116 (72%), Gaps = 3/116 (2%)
 Frame = -2

Query: 898 MAFYNRIGSLISQTHMKTS---VPSMLNAIRGMASSKLFVGGLSYNTNDDSLRDAFSSFG 728
           MAF N++G+L+ Q   ++S   V SMLN +R M+SSKLF+GGLSY  +D SL+DAF+S+G
Sbjct: 1   MAFCNKLGNLLRQGATQSSHAPVSSMLNYLRHMSSSKLFIGGLSYGVDDQSLKDAFASYG 60

Query: 727 DVTEARVITDRDTQRSRGFGFVXXXXXXXXXXXXXAMDGQELEGRNIRVSEATERP 560
           +V EARVITDRDT RSRGFGFV             AMDGQ+L GRNIRVS A +RP
Sbjct: 61  EVVEARVITDRDTGRSRGFGFVNFTSDESATSALSAMDGQDLNGRNIRVSYANDRP 116