BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001649
         (3457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|2...    98   1e-17
ref|XP_002328576.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-16
ref|XP_003529543.1| PREDICTED: LOW QUALITY PROTEIN: importin sub...    92   1e-15
pdb|2YNS|A Chain A, Rimp_alpha_b54nls gi|440690544|pdb|2YNS|B Ch...    91   2e-15
gb|EFA85470.1| putative importin subunit alpha B [Polysphondyliu...    91   3e-15

>ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|222857854|gb|EEE95401.1|
            predicted protein [Populus trichocarpa]
          Length = 537

 Score = 98.2 bits (243), Expect = 1e-17
 Identities = 88/325 (27%), Positives = 155/325 (47%), Gaps = 22/325 (6%)
 Frame = +3

Query: 2124 LTTAIENLWSSVVKINIVVT----------RDQGLAEFLSSEVASLLVVILDQIDLFDIQ 2273
            L   ++ +WS    + +  T          R   + + + + V    V  L + DL  +Q
Sbjct: 79   LPMMVQGVWSDDPSLQLEATTQFRKLLSIERSPPIDDVIKAGVVPRFVEFLGRHDLPQLQ 138

Query: 2274 CMAAEILSLLSFDKCGN----VVKEAVPVLLNAICSDFDQVAIPAASTLARLA--SESFK 2435
              AA  L+ ++     +    +   AVP+ +  + S  D V   A   L  +A  S S +
Sbjct: 139  FEAAWALTNVASGTSEHTRVVIDHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCR 198

Query: 2436 GINVSHFPAVKKALEIHKDRETAI--NLSMFMVFVCRGNDLSFSNKVKVVLPILEHMIVD 2609
             + + H   +    +++++ + ++  N +  +   CRG   +  ++VK  LP+L+ +I  
Sbjct: 199  DLVLGHGALMPLLAQLNENSKLSMLRNATWTLSNFCRGKPPTPFDQVKPALPVLQQLI-H 257

Query: 2610 IPLVLVRVRACYALSYLTFATNVSVKKL----TCKRLMDFTSDTSSLTAGSALGVIGNIV 2777
            +    V   AC+ALSYL+   N  ++ +     C+RL++     S      AL  +GNIV
Sbjct: 258  LNDEEVLTDACWALSYLSDGQNDKIQAVIDAGVCRRLVELLLHPSPTVLIPALRTVGNIV 317

Query: 2778 RWGRPGQIKWLVKDFKLMQCLEQKVLRSTFKKFKMEGCRIISNIAARSEVFIKDMDEAGL 2957
              G  GQ ++++ D +++ CL Q +L++  K  K E C  ISNI A +   I+ + EA +
Sbjct: 318  T-GDDGQTQFVI-DNQVLPCLHQLLLQNHKKSIKKEACWTISNITAGNRTQIQAVIEANI 375

Query: 2958 THHLSNLLEADESDVKMEAAWAVFN 3032
               L NLL+  E D+K EAAWA+ N
Sbjct: 376  ILPLVNLLQHAEFDIKKEAAWAISN 400


>ref|XP_002328576.1| predicted protein [Populus trichocarpa] gi|222838558|gb|EEE76923.1|
            predicted protein [Populus trichocarpa]
          Length = 529

 Score = 94.4 bits (233), Expect = 2e-16
 Identities = 90/325 (27%), Positives = 146/325 (44%), Gaps = 22/325 (6%)
 Frame = +3

Query: 2124 LTTAIENLWSSVVKINIVVT----------RDQGLAEFLSSEVASLLVVILDQIDLFDIQ 2273
            L + +  +WS    + +  T          R   + E + + V    V +L + D   +Q
Sbjct: 75   LPSMVSGVWSDDSNLQLEATTQFRKLLSIERSPPIEEVIQAGVVPRFVELLVREDFPQLQ 134

Query: 2274 CMAAEILSLLSFDKCGN----VVKEAVPVLLNAICSDFDQVAIPAASTLARLASESFK-- 2435
              AA  L+ ++     N    +   AVP+ +  + S  D V   A   L  +A +S K  
Sbjct: 135  FEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSPSDDVREQAVWALGNVAGDSPKCR 194

Query: 2436 GINVSHFPAVKKALEIHKDRETAI--NLSMFMVFVCRGNDLSFSNKVKVVLPILEHMIVD 2609
             + +SH   +    ++++  + ++  N +  +   CRG       KV+  LP LE ++  
Sbjct: 195  DLVLSHGALIPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPLFEKVRPALPALERLVHS 254

Query: 2610 IPLVLVRVRACYALSYLTFATNVSVKKL----TCKRLMDFTSDTSSLTAGSALGVIGNIV 2777
                ++   AC+ALSYL+  TN  ++ +     C RL++     S      AL  +GNIV
Sbjct: 255  TDEEVL-TDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLVPALRTVGNIV 313

Query: 2778 RWGRPGQIKWLVKDFKLMQCLEQKVLRSTFKKFKMEGCRIISNIAARSEVFIKDMDEAGL 2957
              G   Q + ++    L  CL   +  +  K  K E C  ISNI A ++  I+ + EAGL
Sbjct: 314  T-GDDMQTQCIINTGAL-PCLLSLLTHNHKKSIKKEACWTISNITAGNKEQIQAVIEAGL 371

Query: 2958 THHLSNLLEADESDVKMEAAWAVFN 3032
               L NLL+  E D+K EAAWAV N
Sbjct: 372  IGPLVNLLQNAEFDIKKEAAWAVSN 396


>ref|XP_003529543.1| PREDICTED: LOW QUALITY PROTEIN: importin subunit alpha-1-like
            [Glycine max]
          Length = 530

 Score = 92.0 bits (227), Expect = 1e-15
 Identities = 84/297 (28%), Positives = 137/297 (46%), Gaps = 12/297 (4%)
 Frame = +3

Query: 2178 VTRDQGLAEFLSSEVASLLVVILDQIDLFDIQCMAAEILSLLSFDKCGN----VVKEAVP 2345
            + R   + E + + V    V  L + D   +Q  AA  L+ ++     N    +   AVP
Sbjct: 103  IERSPPIEEVIQAGVVPRFVEFLVREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVP 162

Query: 2346 VLLNAICSDFDQVAIPAASTLARLASES--FKGINVSHFPAVKKALEIHKDRETAI--NL 2513
            + +  + S  D V   A   L  +A +S   + + +SH   V    ++++  + ++  N 
Sbjct: 163  IFVKLLSSPSDDVREQAVWALGNVAGDSPRCRDLVLSHGALVPLLAQLNEHAKLSMLRNA 222

Query: 2514 SMFMVFVCRGNDLSFSNKVKVVLPILEHMIVDIPLVLVRVRACYALSYLTFATNVSVKKL 2693
            +  +   CRG       +V+  LP LE ++      ++   AC+ALSYL+  TN  ++ +
Sbjct: 223  TWTLSNFCRGKPQPPFEQVRPALPALERLVFSNDEEVL-TDACWALSYLSDGTNDKIQAV 281

Query: 2694 ----TCKRLMDFTSDTSSLTAGSALGVIGNIVRWGRPGQIKWLVKDFKLMQCLEQKVLRS 2861
                 C RLM      S      AL  +GNIV  G   Q + ++    L  CL   +  +
Sbjct: 282  IEAGVCPRLMQLLMHPSPSVLIPALRTVGNIVT-GDDMQTQCIINHGAL-PCLLNLLTNN 339

Query: 2862 TFKKFKMEGCRIISNIAARSEVFIKDMDEAGLTHHLSNLLEADESDVKMEAAWAVFN 3032
              K  K E C  ISNI A ++  I+ + EAGL   L NLL++ E D+K EA+WA+ N
Sbjct: 340  HKKSIKKEACWTISNITAGNKEQIQTVIEAGLVAPLVNLLQSAEFDIKKEASWAISN 396


>pdb|2YNS|A Chain A, Rimp_alpha_b54nls gi|440690544|pdb|2YNS|B Chain B,
            Rimp_alpha_b54nls gi|440690796|pdb|4B8O|A Chain A,
            Rimp_alpha_sv40tagnls gi|440690799|pdb|4B8P|A Chain A,
            Rimp_alpha_a89nls gi|440690800|pdb|4B8P|B Chain B,
            Rimp_alpha_a89nls
          Length = 490

 Score = 90.9 bits (224), Expect = 2e-15
 Identities = 95/350 (27%), Positives = 149/350 (42%), Gaps = 13/350 (3%)
 Frame = +3

Query: 2022 LVTEKCSESIKYLCSSLAPNFRSFYHLSRNIDPPLTTAIENLWSSVVKINIVVTRDQGLA 2201
            L T+   +++  + SSL       Y    N+    TT    L S        + R   + 
Sbjct: 22   LGTDDDDKAMADIGSSLPAMIGGVYSDDNNLQLEATTQFRKLLS--------IERSPPIE 73

Query: 2202 EFLSSEVASLLVVILDQIDLFDIQCMAAEILSLLSFDKCGN----VVKEAVPVLLNAICS 2369
            E + S V    V  L + D   +Q  AA  L+ ++     N    +   AVP+ +  + S
Sbjct: 74   EVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGS 133

Query: 2370 DFDQVAIPAASTLARLASESFKG-----INVSHFPAVKKALEIHKDRETAINLSMFMVFV 2534
              D V   A   L  +A +S K       N +  P + +  E H       N +  +   
Sbjct: 134  SSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNE-HTKLSMLRNATWTLSNF 192

Query: 2535 CRGNDLSFSNKVKVVLPILEHMIVDIPLVLVRVRACYALSYLTFATNVSVKKL----TCK 2702
            CRG       + +  LP L  +I      ++   AC+ALSYL+  TN  ++ +     C 
Sbjct: 193  CRGKPQPSFEQTRPALPALARLIHSNDEEVL-TDACWALSYLSDGTNDKIQAVIEAGVCP 251

Query: 2703 RLMDFTSDTSSLTAGSALGVIGNIVRWGRPGQIKWLVKDFKLMQCLEQKVLRSTFKKFKM 2882
            RL++     S      AL  +GNIV  G   Q + ++ D + + CL   + ++  K  K 
Sbjct: 252  RLVELLLHPSPSVLIPALRTVGNIVT-GDDAQTQCII-DHQALPCLLSLLTQNLKKSIKK 309

Query: 2883 EGCRIISNIAARSEVFIKDMDEAGLTHHLSNLLEADESDVKMEAAWAVFN 3032
            E C  ISNI A ++  I+ +  AG+   L NLL+  E D+K EAAWA+ N
Sbjct: 310  EACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISN 359


>gb|EFA85470.1| putative importin subunit alpha B [Polysphondylium pallidum PN500]
          Length = 506

 Score = 90.5 bits (223), Expect = 3e-15
 Identities = 94/353 (26%), Positives = 152/353 (43%), Gaps = 31/353 (8%)
 Frame = +3

Query: 2106 RNI--DPPLTTAIENLWSSVVKIN-----------------IVVTRDQGLAEFLSSEVAS 2228
            RNI  DP L   +ENL + V  +                  + + R   + E + + V  
Sbjct: 46   RNIKSDPSLNQRLENLPAMVSGLQSQNYDQILQSTIAFRKLLSIERSPPIQEVIETGVVP 105

Query: 2229 LLVVILDQIDLFDIQCMAAEILSLLSFDKCGN----VVKEAVPVLLNAICSDFDQVAIPA 2396
            L V  L Q +   +Q  AA  L+ ++          +   AV V +  + S  D V   A
Sbjct: 106  LFVQFLSQNEFPQLQFEAAWALTNIASGSATQTKVVIENGAVNVFVILLNSPNDDVREQA 165

Query: 2397 ASTLARLASESFKG----INVSHFPAVKKALEIHKDRETAINLSMFMVFVCRGNDLSFSN 2564
               L  +A +S +     +N    P +   L          N +  +   CRG      +
Sbjct: 166  VWALGNIAGDSVECRDMVLNAGALPPLLNQLVGQPKLSMIRNATWTLSNFCRGKPAPQFD 225

Query: 2565 KVKVVLPILEHMIVDIPLVLVRVRACYALSYLTFATNVSVKKL----TCKRLMDFTSDTS 2732
             V+  LP L H+I +    ++ + AC+ALSYL+   N  ++ +     C+R+++     S
Sbjct: 226  TVRFALPALSHLIFNNDEEVL-IDACWALSYLSDGPNEKIQAVLDAGVCRRMVELLEHPS 284

Query: 2733 SLTAGSALGVIGNIVRWGRPGQIKWLVKDFKLMQCLEQKVLRSTFKKFKMEGCRIISNIA 2912
                  AL  +GNIV  G   Q + ++  + L  CL Q++L ST K  K E C  ISNI 
Sbjct: 285  CAVQTPALRTVGNIVT-GDDMQTQVVLNVYAL-PCL-QRLLMSTKKAIKKEACWTISNIT 341

Query: 2913 ARSEVFIKDMDEAGLTHHLSNLLEADESDVKMEAAWAVFNMHYNVVKYKQEYI 3071
            A ++  I+++ +  +   L NLL   E ++K EAAWA+ N        + EY+
Sbjct: 342  AGNKSQIQEVIDNNIIPSLINLLSNAEFEIKKEAAWAISNATSGGTAQQIEYL 394