BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001631
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]   227   9e-58
ref|XP_004167674.1| PREDICTED: RNA polymerase II transcription f...   213   2e-53
ref|XP_004134713.1| PREDICTED: general transcription factor IIH ...   213   2e-53
ref|NP_974564.1| transcription initiation factor TFIIH subunit H...   212   3e-53
dbj|BAD43671.1| unnamed protein product [Arabidopsis thaliana]        212   3e-53

>emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]
          Length = 451

 Score =  227 bits (579), Expect = 9e-58
 Identities = 114/148 (77%), Positives = 126/148 (85%), Gaps = 2/148 (1%)
 Frame = -1

Query: 438 MPQVRIIAKNFMDMVASLPATKLDNLYHNVFICEAILRSLPPLAKKYVLQMLYIFDAINA 259
           MPQV+IIAKNFMDMVASLPA KLD LYHN FICEAILRSLPPLAKKY+LQMLYI   + A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDALYHNTFICEAILRSLPPLAKKYILQMLYIDVPVTA 60

Query: 258 KLMEEWVPVEGMSKHRVAIDKLVQLRIFTETVDRKRETSYRLNSTFQKNLQNHIIHGGVL 79
           K MEEWV  +G SKHRVAID+L+QLR+FTET DRK+ETSYRLN TFQ NLQ H+I+GGVL
Sbjct: 61  KAMEEWVLADGFSKHRVAIDRLIQLRVFTETSDRKKETSYRLNPTFQTNLQKHLIYGGVL 120

Query: 78  PREPM--QISVRLPSSVDLDAYASEQWE 1
           PREPM   I+VRLPS  DL+AYA  QWE
Sbjct: 121 PREPMPSNITVRLPSLDDLEAYALGQWE 148


>ref|XP_004167674.1| PREDICTED: RNA polymerase II transcription factor B subunit 2-like,
           partial [Cucumis sativus]
          Length = 296

 Score =  213 bits (541), Expect = 2e-53
 Identities = 107/148 (72%), Positives = 124/148 (83%), Gaps = 2/148 (1%)
 Frame = -1

Query: 438 MPQVRIIAKNFMDMVASLPATKLDNLYHNVFICEAILRSLPPLAKKYVLQMLYIFDAINA 259
           MPQV+IIAKNFMDMVASLPA KLD LY N FICEAILRSLPPLAKK+VLQMLYI   ++A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGPVSA 60

Query: 258 KLMEEWVPVEGMSKHRVAIDKLVQLRIFTETVDRKRETSYRLNSTFQKNLQNHIIHGGVL 79
           K MEEWV  +G+SK++VA+D+L+QLR+F ET DRKRET+YRLN TFQ NLQ  +IHG VL
Sbjct: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120

Query: 78  PREPM--QISVRLPSSVDLDAYASEQWE 1
            REPM   I+VRLPS  DL+AYA +QWE
Sbjct: 121 AREPMPSNITVRLPSLEDLEAYALDQWE 148


>ref|XP_004134713.1| PREDICTED: general transcription factor IIH subunit 4-like [Cucumis
           sativus]
          Length = 451

 Score =  213 bits (541), Expect = 2e-53
 Identities = 107/148 (72%), Positives = 124/148 (83%), Gaps = 2/148 (1%)
 Frame = -1

Query: 438 MPQVRIIAKNFMDMVASLPATKLDNLYHNVFICEAILRSLPPLAKKYVLQMLYIFDAINA 259
           MPQV+IIAKNFMDMVASLPA KLD LY N FICEAILRSLPPLAKK+VLQMLYI   ++A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGPVSA 60

Query: 258 KLMEEWVPVEGMSKHRVAIDKLVQLRIFTETVDRKRETSYRLNSTFQKNLQNHIIHGGVL 79
           K MEEWV  +G+SK++VA+D+L+QLR+F ET DRKRET+YRLN TFQ NLQ  +IHG VL
Sbjct: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120

Query: 78  PREPM--QISVRLPSSVDLDAYASEQWE 1
            REPM   I+VRLPS  DL+AYA +QWE
Sbjct: 121 AREPMPSNITVRLPSLEDLEAYALDQWE 148


>ref|NP_974564.1| transcription initiation factor TFIIH subunit H4 [Arabidopsis
           thaliana] gi|332658438|gb|AEE83838.1| transcription
           initiation factor TFIIH subunit H4 [Arabidopsis
           thaliana]
          Length = 462

 Score =  212 bits (540), Expect = 3e-53
 Identities = 108/148 (72%), Positives = 122/148 (82%), Gaps = 2/148 (1%)
 Frame = -1

Query: 438 MPQVRIIAKNFMDMVASLPATKLDNLYHNVFICEAILRSLPPLAKKYVLQMLYIFDAINA 259
           MPQV+IIAKNFMDMVASLPA KLD LY+NVFICEAILRSLPPLAKKYVLQMLYI   + A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVPVPA 60

Query: 258 KLMEEWVPVEGMSKHRVAIDKLVQLRIFTETVDRKRETSYRLNSTFQKNLQNHIIHGGVL 79
            +MEEWV  +G SKHRVAID+L+QLRIF+E  DRKR TSY LN TFQ NLQ HII GGVL
Sbjct: 61  TMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYSLNPTFQNNLQKHIISGGVL 120

Query: 78  PREPMQI--SVRLPSSVDLDAYASEQWE 1
           PREPM    +++LPS  +L+ YA +QWE
Sbjct: 121 PREPMNSDNAIKLPSLQELETYALKQWE 148


>dbj|BAD43671.1| unnamed protein product [Arabidopsis thaliana]
          Length = 452

 Score =  212 bits (540), Expect = 3e-53
 Identities = 108/148 (72%), Positives = 122/148 (82%), Gaps = 2/148 (1%)
 Frame = -1

Query: 438 MPQVRIIAKNFMDMVASLPATKLDNLYHNVFICEAILRSLPPLAKKYVLQMLYIFDAINA 259
           MPQV+IIAKNFMDMVASLPA KLD LY+NVFICEAILRSLPPLAKKYVLQMLYI   + A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVPVPA 60

Query: 258 KLMEEWVPVEGMSKHRVAIDKLVQLRIFTETVDRKRETSYRLNSTFQKNLQNHIIHGGVL 79
            +MEEWV  +G SKHRVAID+L+QLRIF+E  DRKR TSY LN TFQ NLQ HII GGVL
Sbjct: 61  TMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYSLNPTFQNNLQKHIISGGVL 120

Query: 78  PREPMQI--SVRLPSSVDLDAYASEQWE 1
           PREPM    +++LPS  +L+ YA +QWE
Sbjct: 121 PREPMNSDNAIKLPSLQELETYALKQWE 148