BLASTX nr result

ID: Cnidium21_contig00001618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001618
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283264.1| PREDICTED: protein FIZZY-RELATED 3 [Vitis vi...   519   e-145
ref|NP_196888.2| protein FIZZY-related 3 [Arabidopsis thaliana] ...   516   e-144
ref|XP_002531570.1| WD-repeat protein, putative [Ricinus communi...   515   e-144
ref|XP_002873630.1| WD-40 repeat family protein [Arabidopsis lyr...   511   e-143
ref|XP_002312104.1| predicted protein [Populus trichocarpa] gi|2...   508   e-142

>ref|XP_002283264.1| PREDICTED: protein FIZZY-RELATED 3 [Vitis vinifera]
            gi|296086214|emb|CBI31655.3| unnamed protein product
            [Vitis vinifera]
          Length = 471

 Score =  519 bits (1337), Expect = e-145
 Identities = 245/281 (87%), Positives = 261/281 (92%)
 Frame = +2

Query: 2    ASTSKVTKLCDLGPSAGVCSVQWTKEGSYISIGTSLGQVQIWDGTQCKRVRTLSGHQTRT 181
            ASTSKVTKLCDLGPS  VCSVQWT+EGSYISIGT LGQVQ+WDGTQCK+VRT+SGHQTRT
Sbjct: 191  ASTSKVTKLCDLGPSDSVCSVQWTREGSYISIGTHLGQVQVWDGTQCKKVRTMSGHQTRT 250

Query: 182  GVLAWSSRILSSGSRDRNILQHDLRVSKDYINKLVGHKSEVCGLKWSHDDRELASGGNDN 361
            GVLAWSSRILSSGSRDRNILQHDLRVS D+++KLVGHKSEVCGLKWSHDDRELASGGNDN
Sbjct: 251  GVLAWSSRILSSGSRDRNILQHDLRVSNDFVSKLVGHKSEVCGLKWSHDDRELASGGNDN 310

Query: 362  QLLVWNQHSEKPLLKLTEHTAAVKAITWSPHXXXXXXXXXXTADRCIRFWNTTSGNQLNS 541
            QLLVWNQHS++P+LKLTEHTAAVKAI WSPH          TADRCIRFW+TT+GNQLN 
Sbjct: 311  QLLVWNQHSQQPVLKLTEHTAAVKAIAWSPHQSGLLASGGGTADRCIRFWSTTNGNQLNH 370

Query: 542  IDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSMAKVATLTGHSLRVLYLATSPDG 721
            +DTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSM KVATLTGHSLRVLYLA SPDG
Sbjct: 371  VDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSMTKVATLTGHSLRVLYLAMSPDG 430

Query: 722  QTIVTGAGDETLRFWNVFPSMKTQAPVKDTGLWSLGRTSIR 844
            QTIVTGAGDETLRFWN+FPSMKT APVKDTG+WS+GRT IR
Sbjct: 431  QTIVTGAGDETLRFWNIFPSMKTPAPVKDTGVWSMGRTHIR 471


>ref|NP_196888.2| protein FIZZY-related 3 [Arabidopsis thaliana]
            gi|334187668|ref|NP_001190305.1| protein FIZZY-related 3
            [Arabidopsis thaliana] gi|75330295|sp|Q8LPL5.1|FZR3_ARATH
            RecName: Full=Protein FIZZY-RELATED 3; AltName: Full=Cell
            cycle switch protein CCS52B gi|20466231|gb|AAM20433.1|
            cell cycle switch protein [Arabidopsis thaliana]
            gi|25084105|gb|AAN72176.1| cell cycle switch protein
            [Arabidopsis thaliana] gi|332004565|gb|AED91948.1|
            protein FIZZY-related 3 [Arabidopsis thaliana]
            gi|332004566|gb|AED91949.1| protein FIZZY-related 3
            [Arabidopsis thaliana]
          Length = 481

 Score =  516 bits (1328), Expect = e-144
 Identities = 242/281 (86%), Positives = 260/281 (92%)
 Frame = +2

Query: 2    ASTSKVTKLCDLGPSAGVCSVQWTKEGSYISIGTSLGQVQIWDGTQCKRVRTLSGHQTRT 181
            AS SKVTKLCDLGP+  VCSVQWT+EGSYISIGTS GQVQ+WDGTQCKRVRT+ GHQTRT
Sbjct: 201  ASNSKVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRT 260

Query: 182  GVLAWSSRILSSGSRDRNILQHDLRVSKDYINKLVGHKSEVCGLKWSHDDRELASGGNDN 361
            GVLAW+SRILSSGSRDRNILQHD+RV  D+++KLVGHKSEVCGLKWSHDDRELASGGNDN
Sbjct: 261  GVLAWNSRILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDN 320

Query: 362  QLLVWNQHSEKPLLKLTEHTAAVKAITWSPHXXXXXXXXXXTADRCIRFWNTTSGNQLNS 541
            QLLVWN HS++P+LKLTEHTAAVKAITWSPH          TADRCIRFWNTT+GNQLNS
Sbjct: 321  QLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNS 380

Query: 542  IDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSMAKVATLTGHSLRVLYLATSPDG 721
            IDTGSQVCNLAWSKNVNE+VSTHGYSQNQIM+WKYPSM+KVATLTGHS+RVLYLATSPDG
Sbjct: 381  IDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDG 440

Query: 722  QTIVTGAGDETLRFWNVFPSMKTQAPVKDTGLWSLGRTSIR 844
            QTIVTGAGDETLRFWNVFPS+K Q PVKDTGLWSLGRT IR
Sbjct: 441  QTIVTGAGDETLRFWNVFPSVKMQTPVKDTGLWSLGRTQIR 481


>ref|XP_002531570.1| WD-repeat protein, putative [Ricinus communis]
            gi|223528800|gb|EEF30806.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 493

 Score =  515 bits (1326), Expect = e-144
 Identities = 244/281 (86%), Positives = 258/281 (91%)
 Frame = +2

Query: 2    ASTSKVTKLCDLGPSAGVCSVQWTKEGSYISIGTSLGQVQIWDGTQCKRVRTLSGHQTRT 181
            AS SKVTKLCDLGP   VCSVQWT+EGSYISIGT LGQVQ+WDGTQCKRVRT+ GHQTRT
Sbjct: 213  ASNSKVTKLCDLGPHDSVCSVQWTREGSYISIGTGLGQVQVWDGTQCKRVRTMGGHQTRT 272

Query: 182  GVLAWSSRILSSGSRDRNILQHDLRVSKDYINKLVGHKSEVCGLKWSHDDRELASGGNDN 361
            GVLAW+SRILSSGSRDRNILQHDLRVS D+++KLVGHKSEVCGLKWSHDDRELASGGNDN
Sbjct: 273  GVLAWNSRILSSGSRDRNILQHDLRVSSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDN 332

Query: 362  QLLVWNQHSEKPLLKLTEHTAAVKAITWSPHXXXXXXXXXXTADRCIRFWNTTSGNQLNS 541
            QLLVWNQHS++P+LKLTEHTAAVKAI WSPH          TADRCIRFWNTT+G+QLN 
Sbjct: 333  QLLVWNQHSQQPVLKLTEHTAAVKAIAWSPHQSSLLASGGGTADRCIRFWNTTNGHQLNH 392

Query: 542  IDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSMAKVATLTGHSLRVLYLATSPDG 721
            +DTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPS+AKVATLTGHSLRVLYLA SPDG
Sbjct: 393  VDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLAKVATLTGHSLRVLYLAMSPDG 452

Query: 722  QTIVTGAGDETLRFWNVFPSMKTQAPVKDTGLWSLGRTSIR 844
            QTIVTGAGDETLRFWNVFPSMK  APVKDTGLWSLGRT IR
Sbjct: 453  QTIVTGAGDETLRFWNVFPSMKAPAPVKDTGLWSLGRTHIR 493


>ref|XP_002873630.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297319467|gb|EFH49889.1| WD-40 repeat family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 481

 Score =  511 bits (1317), Expect = e-143
 Identities = 240/281 (85%), Positives = 259/281 (92%)
 Frame = +2

Query: 2    ASTSKVTKLCDLGPSAGVCSVQWTKEGSYISIGTSLGQVQIWDGTQCKRVRTLSGHQTRT 181
            AS SKV+KLCDLGP+  VCSVQWT+EGSYISIGTS GQVQ+WDG QCKRVRT+ GHQTRT
Sbjct: 201  ASNSKVSKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVWDGIQCKRVRTMGGHQTRT 260

Query: 182  GVLAWSSRILSSGSRDRNILQHDLRVSKDYINKLVGHKSEVCGLKWSHDDRELASGGNDN 361
            GVLAW+SRILSSGSRDRNILQHD+RV  DY++KLVGHKSEVCGLKWSHDDRELASGGNDN
Sbjct: 261  GVLAWNSRILSSGSRDRNILQHDIRVQSDYVSKLVGHKSEVCGLKWSHDDRELASGGNDN 320

Query: 362  QLLVWNQHSEKPLLKLTEHTAAVKAITWSPHXXXXXXXXXXTADRCIRFWNTTSGNQLNS 541
            QLLVWN HS++P+LKLTEHTAAVKAITWSPH          TADRCIRFWNTT+G+QLNS
Sbjct: 321  QLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGHQLNS 380

Query: 542  IDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSMAKVATLTGHSLRVLYLATSPDG 721
            IDTGSQVCNLAWSKNVNE+VSTHGYSQNQIM+WKYPSM+KVATLTGHS+RVLYLATSPDG
Sbjct: 381  IDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDG 440

Query: 722  QTIVTGAGDETLRFWNVFPSMKTQAPVKDTGLWSLGRTSIR 844
            QTIVTGAGDETLRFWNVFPS+K Q PVKDTGLWSLGRT IR
Sbjct: 441  QTIVTGAGDETLRFWNVFPSVKMQTPVKDTGLWSLGRTQIR 481


>ref|XP_002312104.1| predicted protein [Populus trichocarpa] gi|222851924|gb|EEE89471.1|
            predicted protein [Populus trichocarpa]
          Length = 485

 Score =  508 bits (1309), Expect = e-142
 Identities = 237/281 (84%), Positives = 257/281 (91%)
 Frame = +2

Query: 2    ASTSKVTKLCDLGPSAGVCSVQWTKEGSYISIGTSLGQVQIWDGTQCKRVRTLSGHQTRT 181
            AS SKVT+LCDLGP+  VCSVQWT+EGSYIS+GT LGQVQ+WDGTQCKRVRT+ GHQTRT
Sbjct: 205  ASNSKVTRLCDLGPNDSVCSVQWTREGSYISVGTHLGQVQVWDGTQCKRVRTMGGHQTRT 264

Query: 182  GVLAWSSRILSSGSRDRNILQHDLRVSKDYINKLVGHKSEVCGLKWSHDDRELASGGNDN 361
            GVLAW+SR L+SGSRDR+ILQHDLR+S DY++KL+GHKSEVCGLKWSHDDRELASGGNDN
Sbjct: 265  GVLAWNSRTLASGSRDRHILQHDLRISSDYVSKLIGHKSEVCGLKWSHDDRELASGGNDN 324

Query: 362  QLLVWNQHSEKPLLKLTEHTAAVKAITWSPHXXXXXXXXXXTADRCIRFWNTTSGNQLNS 541
            QLLVWNQHS+ P+LKLTEHTAAVKAI WSPH          TADRCIRFWNTT+G+QLN 
Sbjct: 325  QLLVWNQHSQLPILKLTEHTAAVKAIAWSPHQSGLLASGGGTADRCIRFWNTTNGHQLNY 384

Query: 542  IDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSMAKVATLTGHSLRVLYLATSPDG 721
            +DTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPS++KVATL GHSLRVLYLA SPDG
Sbjct: 385  VDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLSKVATLVGHSLRVLYLAMSPDG 444

Query: 722  QTIVTGAGDETLRFWNVFPSMKTQAPVKDTGLWSLGRTSIR 844
            QTIVTGAGDETLRFWNVFPSMKTQ PVKDTGLWSLGRT IR
Sbjct: 445  QTIVTGAGDETLRFWNVFPSMKTQTPVKDTGLWSLGRTQIR 485


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