BLASTX nr result

ID: Cnidium21_contig00001617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001617
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541820.1| PREDICTED: TPR repeat-containing thioredoxin...    59   4e-07
ref|XP_002524280.1| Small glutamine-rich tetratricopeptide repea...    58   7e-07
ref|XP_002891741.1| hypothetical protein ARALYDRAFT_892363 [Arab...    57   1e-06
ref|NP_175737.1| TPR repeat-containing thioredoxin TTL1 [Arabido...    56   3e-06
ref|XP_002317465.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_003541820.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Glycine
           max]
          Length = 692

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
 Frame = +2

Query: 218 GVDK-LTDRLRKSLTSDEDAEVNKPDFRELDLGSPVTPLRTKVTTSSSSS 364
           G+D   +DR R +LT D++  +NKPDFRELDLGSPV+PLRT    ++SSS
Sbjct: 14  GIDATFSDRFRDALTCDDNNNINKPDFRELDLGSPVSPLRTTRGPAASSS 63


>ref|XP_002524280.1| Small glutamine-rich tetratricopeptide repeat-containing protein A,
           putative [Ricinus communis] gi|223536471|gb|EEF38119.1|
           Small glutamine-rich tetratricopeptide repeat-containing
           protein A, putative [Ricinus communis]
          Length = 640

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/60 (58%), Positives = 39/60 (65%), Gaps = 11/60 (18%)
 Frame = +2

Query: 218 GVDKLTDRLRKSLTSDEDAEVNKPDFRELDLGSPVTPLRTK-----------VTTSSSSS 364
           G+D LTD+LR S  S    E NKPDFRELDLGSPV+PLRT+            TTSSSSS
Sbjct: 12  GLDSLTDQLRDSSCS---LEANKPDFRELDLGSPVSPLRTRGLNTTTTTTTTTTTSSSSS 68


>ref|XP_002891741.1| hypothetical protein ARALYDRAFT_892363 [Arabidopsis lyrata subsp.
           lyrata] gi|297337583|gb|EFH68000.1| hypothetical protein
           ARALYDRAFT_892363 [Arabidopsis lyrata subsp. lyrata]
          Length = 688

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/51 (66%), Positives = 41/51 (80%), Gaps = 4/51 (7%)
 Frame = +2

Query: 224 DKLTDRLR-KSLTSDEDAEVNKPDFRELDLGSPVTPLRTK---VTTSSSSS 364
           DKL+D LR  SLTS    E+NKPDFRELDLGSPV+PLR++   VTT++SSS
Sbjct: 12  DKLSDHLRDSSLTS----EINKPDFRELDLGSPVSPLRSQPRGVTTTTSSS 58


>ref|NP_175737.1| TPR repeat-containing thioredoxin TTL1 [Arabidopsis thaliana]
           gi|75336154|sp|Q9MAH1.1|TTL1_ARATH RecName: Full=TPR
           repeat-containing thioredoxin TTL1; AltName:
           Full=Tetratricopeptide repeat thioredoxin-like 1
           gi|7769858|gb|AAF69536.1|AC008007_11 F12M16.20
           [Arabidopsis thaliana] gi|30102668|gb|AAP21252.1|
           At1g53300 [Arabidopsis thaliana]
           gi|332194799|gb|AEE32920.1| TPR repeat-containing
           thioredoxin TTL1 [Arabidopsis thaliana]
          Length = 699

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 36/58 (62%), Positives = 39/58 (67%), Gaps = 11/58 (18%)
 Frame = +2

Query: 224 DKLTDRLR-KSLTSDEDAEVNKPDFRELDLGSPVTPLR----------TKVTTSSSSS 364
           DKL+D LR  SLTS    E+NKPDFRELDLGSPV+PLR          T  TTSSSSS
Sbjct: 12  DKLSDHLRDSSLTS----EINKPDFRELDLGSPVSPLRSQPRGLTTTTTTTTTSSSSS 65


>ref|XP_002317465.1| predicted protein [Populus trichocarpa] gi|222860530|gb|EEE98077.1|
           predicted protein [Populus trichocarpa]
          Length = 698

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/51 (56%), Positives = 41/51 (80%), Gaps = 3/51 (5%)
 Frame = +2

Query: 221 VDKLTDRLRKSLTSDEDAEVNKPDFRELDLGSPVTPLRTK---VTTSSSSS 364
           ++ LTD+LR SL+S    E NKPDFRELDLGSPV+PLRT+   +TT+++++
Sbjct: 17  LNSLTDQLRDSLSS---FEANKPDFRELDLGSPVSPLRTRGGLITTTTATA 64


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