BLASTX nr result

ID: Cnidium21_contig00001607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001607
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC81314.1| hypothetical protein OsI_24468 [Oryza sativa Indi...    66   6e-09
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...    64   2e-08
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    64   3e-08
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    63   4e-08
gb|EEE56910.1| hypothetical protein OsJ_06585 [Oryza sativa Japo...    63   5e-08

>gb|EEC81314.1| hypothetical protein OsI_24468 [Oryza sativa Indica Group]
          Length = 797

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 62/211 (29%), Positives = 93/211 (44%), Gaps = 10/211 (4%)
 Frame = +1

Query: 1   LCNSDWQNSFLEACVKVLPWQCSDQRPLLVTIPIAGQLNKYGQKKRLSRFHFEEAWG*R* 180
           L +  W++ F  A V  L   CSD  P+LV            ++ R    H+E  W    
Sbjct: 393 LADESWRDIFTNAQVVHLISPCSDHSPILVKFTTGSD-----RQCRAKCLHYEICWECEP 447

Query: 181 *LH*IN*GLLEP----------LRSVF*SLKFKN*AV*VWQTT*AVE*SEEDRMEERNG* 330
            +     G+++           L  +  +LK    A+  W     V+    DR  E+   
Sbjct: 448 AVQ----GIVKDAWVESDEMLHLGDISKALKRVMGALQSWSK---VKFKNIDRELEK--- 497

Query: 331 CLRKNLSVLSEYNDPALWKYIKNEEKKFNMLSEKEERYWRQRSRALWLKNGDRNTK*FHT 510
             RK+L++L E N  +  + I+    + N L  +EE  W QRSR  WLK GD NTK FH+
Sbjct: 498 -ARKHLAMLMEQNADS--REIRQASDRMNELLYREEMLWLQRSRISWLKEGDHNTKFFHS 554

Query: 511 KASA*RRKNHIEGLRDHEGCWPDDVSVIQQL 603
           KA    +KN I  LR  +G   +  + I++L
Sbjct: 555 KAVWRAKKNRISRLRASDGTIHNTATTIEKL 585


>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/77 (38%), Positives = 46/77 (59%)
 Frame = +1

Query: 406 KKFNMLSEKEERYWRQRSRALWLKNGDRNTK*FHTKASA*RRKNHIEGLRDHEGCWPDDV 585
           K+F ++ E+EE  W Q+SR  W+  GDRNTK FHT     RR+N IE L+D EG W ++ 
Sbjct: 296 KEFEVVLEQEEIVWFQKSREKWIALGDRNTKYFHTSTIIRRRRNQIEMLKDDEGKWVEEP 355

Query: 586 SVIQQLIMRKQGLLFKI 636
             + ++ +     L+ +
Sbjct: 356 EELAKMAVEYYQKLYSV 372


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1936

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 63/215 (29%), Positives = 89/215 (41%), Gaps = 14/215 (6%)
 Frame = +1

Query: 1    LCNSDWQNSFLEACVKVLPWQCSDQRPLLVTIPIAGQLNKYGQKKRLSRFHFE------- 159
            + +  W++ F EA V  L   CSD  P+L+   +     K   + R    H+E       
Sbjct: 836  VADDKWRDLFPEAQVSHLVSPCSDHSPILLEFIV-----KDTTRPRQKCLHYEIVWEREP 890

Query: 160  -------EAWG*R**LH*IN*GLLEPLRSVF*SLKFKN*AV*VWQTT*AVE*SEEDRMEE 318
                   EAW        IN G+   L  +  +L     A+  W  T      +E  +E+
Sbjct: 891  ESVQVIEEAW--------INAGVKTDLGDINIALGRVMSALRSWSKTKVKNVGKE--LEK 940

Query: 319  RNG*CLRKNLSVLSEYNDPALWKYIKNEEKKFNMLSEKEERYWRQRSRALWLKNGDRNTK 498
                  RK L  L   N  A    I+      N +  +EE  W QRSR  WLK GDRNT+
Sbjct: 941  A-----RKKLEDLIASN--AARSSIRQATDHMNEMLYREEMLWLQRSRVNWLKEGDRNTR 993

Query: 499  *FHTKASA*RRKNHIEGLRDHEGCWPDDVSVIQQL 603
             FH++A    +KN I  LRD  G      SV++ +
Sbjct: 994  FFHSRAVWRAKKNKISKLRDENGAIHSTTSVLETM 1028


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 30/65 (46%), Positives = 44/65 (67%)
 Frame = +1

Query: 403 EKKFNMLSEKEERYWRQRSRALWLKNGDRNTK*FHTKASA*RRKNHIEGLRDHEGCWPDD 582
           EKK + L  K+E  W  RSRA+ +++GDRNTK FH KAS  +++N ++GL D  G W ++
Sbjct: 324 EKKLDELHAKQEARWYLRSRAMEVRDGDRNTKYFHHKASQRKKRNFVKGLFDASGTWCEE 383

Query: 583 VSVIQ 597
           V  I+
Sbjct: 384 VDDIE 388


>gb|EEE56910.1| hypothetical protein OsJ_06585 [Oryza sativa Japonica Group]
          Length = 196

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 37/87 (42%), Positives = 47/87 (54%)
 Frame = +1

Query: 337 RKNLSVLSEYNDPALWKYIKNEEKKFNMLSEKEERYWRQRSRALWLKNGDRNTK*FHTKA 516
           RK L+ L E N  +L   I+    + N L  +EE  W QRSR  WLK GDRNT+ FH++A
Sbjct: 22  RKELAALLESNSDSL--AIRGATDRLNELLYREEMLWLQRSRINWLKEGDRNTRFFHSRA 79

Query: 517 SA*RRKNHIEGLRDHEGCWPDDVSVIQ 597
               +KN I  LRD  G       +IQ
Sbjct: 80  VWRAKKNKITKLRDANGVVHSSTKLIQ 106


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