BLASTX nr result

ID: Cnidium21_contig00001584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001584
         (1152 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312401.1| predicted protein [Populus trichocarpa] gi|2...   315   2e-83
ref|XP_002279311.2| PREDICTED: 50S ribosomal protein L15, chloro...   306   6e-81
ref|XP_004135093.1| PREDICTED: 50S ribosomal protein L15, chloro...   302   9e-80
ref|XP_002531621.1| 50S ribosomal protein L15, putative [Ricinus...   302   9e-80
ref|XP_002876939.1| hypothetical protein ARALYDRAFT_484358 [Arab...   297   3e-78

>ref|XP_002312401.1| predicted protein [Populus trichocarpa] gi|222852221|gb|EEE89768.1|
           predicted protein [Populus trichocarpa]
          Length = 256

 Score =  315 bits (806), Expect = 2e-83
 Identities = 167/247 (67%), Positives = 188/247 (76%)
 Frame = +2

Query: 104 FKGNVSNLKASTTHIVSFKLNLTHKDSSSRKLLIVLNQASSLSPITASTSVTSTRLRLDN 283
           FKGN++ LK  T +     L+  +K  S     +V+NQA++ S +T S+     RLRLDN
Sbjct: 17  FKGNLTRLKPKTCNFTCLTLHSKNKRPS-----VVVNQAAAPSVVTTSSGA---RLRLDN 68

Query: 284 LGPQPXXXXXXXXXXXXXXXXXXXXXXXXMRGQKSRSGPGVMRGFEGGQMPLYRRLPKLR 463
           LGPQP                        MRGQKSRSGPGV +GFEGGQMPLYRR+PKLR
Sbjct: 69  LGPQPGSRKKGKRKGRGISAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLR 128

Query: 464 GIAGGMHAGLPKYLPVNLKDIAAAGFQEGEEVSLESLKSKGLINPSGRERRLPLKILGDG 643
           GIAGGMHAGLPKY+PVNLKDIA+AGFQEG EVSLE+LK KGLINPSGRERRLPLK+LGDG
Sbjct: 129 GIAGGMHAGLPKYVPVNLKDIASAGFQEGAEVSLETLKEKGLINPSGRERRLPLKVLGDG 188

Query: 644 DLSVKLNFKARAFSAAAKEKLEAVGCSLTTLPGRKKWVKPSVSKNLARAEEYFAKKRASP 823
           +LSVKLN KARAFSAAAKEKLEA GCSLT LPGRKKWVKPSV+KNLARAEEYFAKKRA+ 
Sbjct: 189 ELSVKLNIKARAFSAAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKKRAAA 248

Query: 824 EWSEPAS 844
             SEP+S
Sbjct: 249 IVSEPSS 255


>ref|XP_002279311.2| PREDICTED: 50S ribosomal protein L15, chloroplastic-like [Vitis
           vinifera] gi|297737813|emb|CBI27014.3| unnamed protein
           product [Vitis vinifera]
          Length = 262

 Score =  306 bits (784), Expect = 6e-81
 Identities = 163/241 (67%), Positives = 181/241 (75%)
 Frame = +2

Query: 104 FKGNVSNLKASTTHIVSFKLNLTHKDSSSRKLLIVLNQASSLSPITASTSVTSTRLRLDN 283
           FKGNV NLKA+    ++ KL +  K   S   ++V +Q S       S+ V + R RLDN
Sbjct: 26  FKGNVRNLKANPCQFLTIKLEVKEKVRKSG--VVVASQGSP------SSVVDNVRFRLDN 77

Query: 284 LGPQPXXXXXXXXXXXXXXXXXXXXXXXXMRGQKSRSGPGVMRGFEGGQMPLYRRLPKLR 463
           LGPQP                        MRGQKSRSGPGVM+GFEGGQMPLYRR+PKLR
Sbjct: 78  LGPQPGSRKKAKRKGRGISAGQGNSCGFGMRGQKSRSGPGVMKGFEGGQMPLYRRIPKLR 137

Query: 464 GIAGGMHAGLPKYLPVNLKDIAAAGFQEGEEVSLESLKSKGLINPSGRERRLPLKILGDG 643
           GIAGGMHAGLPKY+PVNLKDI AAGFQEGEEVSL+SLK KGLINPSGRERRLPLKILG G
Sbjct: 138 GIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLDSLKKKGLINPSGRERRLPLKILGAG 197

Query: 644 DLSVKLNFKARAFSAAAKEKLEAVGCSLTTLPGRKKWVKPSVSKNLARAEEYFAKKRASP 823
           DLSVKLN KARAFS++AKEKLEA GCS+T LPGRKKW+KPSV KNLARAEEYFAKKRA+ 
Sbjct: 198 DLSVKLNIKARAFSSSAKEKLEAAGCSITVLPGRKKWLKPSVIKNLARAEEYFAKKRAAA 257

Query: 824 E 826
           E
Sbjct: 258 E 258


>ref|XP_004135093.1| PREDICTED: 50S ribosomal protein L15, chloroplastic-like [Cucumis
           sativus] gi|449512847|ref|XP_004164157.1| PREDICTED: 50S
           ribosomal protein L15, chloroplastic-like [Cucumis
           sativus]
          Length = 268

 Score =  302 bits (774), Expect = 9e-80
 Identities = 163/247 (65%), Positives = 183/247 (74%)
 Frame = +2

Query: 104 FKGNVSNLKASTTHIVSFKLNLTHKDSSSRKLLIVLNQASSLSPITASTSVTSTRLRLDN 283
           FKGNV+ L +    I S +L     D    K L+V NQA++ S   +++   + R RLDN
Sbjct: 26  FKGNVNILNSKHLSISSLRLKSKSVDG---KHLVVRNQAAASS--LSASPAENVRFRLDN 80

Query: 284 LGPQPXXXXXXXXXXXXXXXXXXXXXXXXMRGQKSRSGPGVMRGFEGGQMPLYRRLPKLR 463
           LGPQP                        MRGQKSRSGPGV +GFEGGQMPLYRR+PKLR
Sbjct: 81  LGPQPGSRKRGKRKGRGISAGQGGSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLR 140

Query: 464 GIAGGMHAGLPKYLPVNLKDIAAAGFQEGEEVSLESLKSKGLINPSGRERRLPLKILGDG 643
           GIAGGMHAGLPKY+PVNLKDI  AGFQEGEEVSLESLK KGLINPSGRER+LPLKIL DG
Sbjct: 141 GIAGGMHAGLPKYVPVNLKDIEEAGFQEGEEVSLESLKEKGLINPSGRERKLPLKILADG 200

Query: 644 DLSVKLNFKARAFSAAAKEKLEAVGCSLTTLPGRKKWVKPSVSKNLARAEEYFAKKRASP 823
           +LSVKLN KARAFS+AAKEKLEA GCSLT LPGRKKWVKPSV+KNLARAEEYFAKK+A+ 
Sbjct: 201 ELSVKLNIKARAFSSAAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKKKAAA 260

Query: 824 EWSEPAS 844
             +E AS
Sbjct: 261 AAAEQAS 267


>ref|XP_002531621.1| 50S ribosomal protein L15, putative [Ricinus communis]
           gi|223528739|gb|EEF30749.1| 50S ribosomal protein L15,
           putative [Ricinus communis]
          Length = 263

 Score =  302 bits (774), Expect = 9e-80
 Identities = 155/239 (64%), Positives = 180/239 (75%)
 Frame = +2

Query: 104 FKGNVSNLKASTTHIVSFKLNLTHKDSSSRKLLIVLNQASSLSPITASTSVTSTRLRLDN 283
           FKGN+++L+  T  ++   LN  +      + L+V+NQA S +     ++ +  R RLDN
Sbjct: 16  FKGNLTSLRLKTCTLIP--LNFNNAKPKGTQQLVVINQARSTAAAAIQSASSGVRFRLDN 73

Query: 284 LGPQPXXXXXXXXXXXXXXXXXXXXXXXXMRGQKSRSGPGVMRGFEGGQMPLYRRLPKLR 463
           LGPQ                         MRGQKSRSGPGV +GFEGGQMPLYRR+PKLR
Sbjct: 74  LGPQRGSRKRGKRKGRGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLR 133

Query: 464 GIAGGMHAGLPKYLPVNLKDIAAAGFQEGEEVSLESLKSKGLINPSGRERRLPLKILGDG 643
           GIAGGMHAGLPK++PVNLKDI AAGFQEGEEVSLE+LK KGLINPSGRERRLPLKILGDG
Sbjct: 134 GIAGGMHAGLPKFVPVNLKDIEAAGFQEGEEVSLETLKEKGLINPSGRERRLPLKILGDG 193

Query: 644 DLSVKLNFKARAFSAAAKEKLEAVGCSLTTLPGRKKWVKPSVSKNLARAEEYFAKKRAS 820
           +LSVK+N KARAFS +AKEKLEA GCSLT LPGRKKWVKPSV+KNLARAEEYFAKK+A+
Sbjct: 194 ELSVKVNIKARAFSTSAKEKLEAAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKKKAA 252


>ref|XP_002876939.1| hypothetical protein ARALYDRAFT_484358 [Arabidopsis lyrata subsp.
           lyrata] gi|297322777|gb|EFH53198.1| hypothetical protein
           ARALYDRAFT_484358 [Arabidopsis lyrata subsp. lyrata]
          Length = 275

 Score =  297 bits (761), Expect = 3e-78
 Identities = 162/253 (64%), Positives = 185/253 (73%), Gaps = 5/253 (1%)
 Frame = +2

Query: 104 FKGNVSNLKASTTHIVSFKLNL---THKDSSSRKLLIVLNQASSLSPITASTSVTSTRLR 274
           FKGNVS L A+ + I+S KLN    T K   S + L+V++QA++ S + A       R R
Sbjct: 27  FKGNVSVLGANPSQILSLKLNQKLKTRKQQQSARPLVVVSQAAATSEVVAPE-----RFR 81

Query: 275 LDNLGPQPXXXXXXXXXXXXXXXXXXXXXXXXMRGQKSRSGPGVMRGFEGGQMPLYRRLP 454
           LDNLGPQP                        MRGQKSRSGPG+MRGFEGGQ  LYRRLP
Sbjct: 82  LDNLGPQPGSRKRQKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLP 141

Query: 455 KLRGIAGGMHAGLPKYLPVNLKDIAAAGFQEGEEVSLESLKSKGLINPSGRERRLPLKIL 634
           KLRGIAGGM +GLPKYLPVNLKDI  AGFQEG+EVSLE+LK KGLINPSGRER+LPLKIL
Sbjct: 142 KLRGIAGGMRSGLPKYLPVNLKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLKIL 201

Query: 635 GDGDLSVKLNFKARAFSAAAKEKLEAVGCSLTTLPGRKKWVKPSVSKNLARAEEYFAKKR 814
           G G+LS+KL FKARAFS  AKEKLEA GC+LT LPGRKKWVKPSV+KN ARA+EYFAKKR
Sbjct: 202 GTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPGRKKWVKPSVAKNQARADEYFAKKR 261

Query: 815 --ASPEWSEPAST 847
             A+   SEPA++
Sbjct: 262 AAAAEATSEPAAS 274


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