BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001583
         (879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312401.1| predicted protein [Populus trichocarpa] gi|2...   221   3e-66
ref|XP_002279311.2| PREDICTED: 50S ribosomal protein L15, chloro...   222   7e-65
ref|XP_002876939.1| hypothetical protein ARALYDRAFT_484358 [Arab...   222   4e-64
ref|NP_189221.1| 50S ribosomal protein L15 [Arabidopsis thaliana...   219   3e-63
emb|CAA77593.1| Plastid ribosomal protein CL15 [Arabidopsis thal...   219   3e-63

>ref|XP_002312401.1| predicted protein [Populus trichocarpa] gi|222852221|gb|EEE89768.1|
           predicted protein [Populus trichocarpa]
          Length = 256

 Score =  221 bits (562), Expect(2) = 3e-66
 Identities = 118/192 (61%), Positives = 139/192 (72%)
 Frame = -1

Query: 810 FKGNVSNLKTRPTHFVSLNLNRAHDIKISRKPLVVLNQAASSLPISDDTLVASPRLRLDN 631
           FKGN++ LK +  +F  L L+  +     ++P VV+NQAA+   +   T  +  RLRLDN
Sbjct: 17  FKGNLTRLKPKTCNFTCLTLHSKN-----KRPSVVVNQAAAPSVV---TTSSGARLRLDN 68

Query: 630 LGPQPXXXXXXXXXXXXXXXXXXXXXXXGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLR 451
           LGPQP                       GMRGQKSRSGPG+ +GFEGGQMPLYRR+PKLR
Sbjct: 69  LGPQPGSRKKGKRKGRGISAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLR 128

Query: 450 GIAGGMRAGLPKYLPVNLKDIAAAGFEEGEEVSLESLKSKGLINPSGRERRLPLKILGDG 271
           GIAGGM AGLPKY+PVNLKDIA+AGF+EG EVSLE+LK KGLINPSGRERRLPLK+LGDG
Sbjct: 129 GIAGGMHAGLPKYVPVNLKDIASAGFQEGAEVSLETLKEKGLINPSGRERRLPLKVLGDG 188

Query: 270 DLSVKLNFKARA 235
           +LSVKLN KARA
Sbjct: 189 ELSVKLNIKARA 200



 Score = 58.2 bits (139), Expect(2) = 3e-66
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = -3

Query: 124 RKKWVKPSVSKNLARAEEYFAKKRASPEWSDPPSA 20
           RKKWVKPSV+KNLARAEEYFAKKRA+   S+P SA
Sbjct: 222 RKKWVKPSVAKNLARAEEYFAKKRAAAIVSEPSSA 256


>ref|XP_002279311.2| PREDICTED: 50S ribosomal protein L15, chloroplastic-like [Vitis
           vinifera] gi|297737813|emb|CBI27014.3| unnamed protein
           product [Vitis vinifera]
          Length = 262

 Score =  222 bits (565), Expect(2) = 7e-65
 Identities = 120/192 (62%), Positives = 137/192 (71%)
 Frame = -1

Query: 810 FKGNVSNLKTRPTHFVSLNLNRAHDIKISRKPLVVLNQAASSLPISDDTLVASPRLRLDN 631
           FKGNV NLK  P  F+++ L      K+ +  +VV +Q + S      ++V + R RLDN
Sbjct: 26  FKGNVRNLKANPCQFLTIKLEVKE--KVRKSGVVVASQGSPS------SVVDNVRFRLDN 77

Query: 630 LGPQPXXXXXXXXXXXXXXXXXXXXXXXGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLR 451
           LGPQP                       GMRGQKSRSGPG+M+GFEGGQMPLYRR+PKLR
Sbjct: 78  LGPQPGSRKKAKRKGRGISAGQGNSCGFGMRGQKSRSGPGVMKGFEGGQMPLYRRIPKLR 137

Query: 450 GIAGGMRAGLPKYLPVNLKDIAAAGFEEGEEVSLESLKSKGLINPSGRERRLPLKILGDG 271
           GIAGGM AGLPKY+PVNLKDI AAGF+EGEEVSL+SLK KGLINPSGRERRLPLKILG G
Sbjct: 138 GIAGGMHAGLPKYVPVNLKDIEAAGFQEGEEVSLDSLKKKGLINPSGRERRLPLKILGAG 197

Query: 270 DLSVKLNFKARA 235
           DLSVKLN KARA
Sbjct: 198 DLSVKLNIKARA 209



 Score = 52.4 bits (124), Expect(2) = 7e-65
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = -3

Query: 124 RKKWVKPSVSKNLARAEEYFAKKRASPE 41
           RKKW+KPSV KNLARAEEYFAKKRA+ E
Sbjct: 231 RKKWLKPSVIKNLARAEEYFAKKRAAAE 258


>ref|XP_002876939.1| hypothetical protein ARALYDRAFT_484358 [Arabidopsis lyrata subsp.
           lyrata] gi|297322777|gb|EFH53198.1| hypothetical protein
           ARALYDRAFT_484358 [Arabidopsis lyrata subsp. lyrata]
          Length = 275

 Score =  222 bits (565), Expect(2) = 4e-64
 Identities = 123/196 (62%), Positives = 140/196 (71%), Gaps = 3/196 (1%)
 Frame = -1

Query: 813 SFKGNVSNLKTRPTHFVSLNLN---RAHDIKISRKPLVVLNQAASSLPISDDTLVASPRL 643
           SFKGNVS L   P+  +SL LN   +    + S +PLVV++QAA++  +     VA  R 
Sbjct: 26  SFKGNVSVLGANPSQILSLKLNQKLKTRKQQQSARPLVVVSQAAATSEV-----VAPERF 80

Query: 642 RLDNLGPQPXXXXXXXXXXXXXXXXXXXXXXXGMRGQKSRSGPGIMRGFEGGQMPLYRRL 463
           RLDNLGPQP                       GMRGQKSRSGPGIMRGFEGGQ  LYRRL
Sbjct: 81  RLDNLGPQPGSRKRQKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRL 140

Query: 462 PKLRGIAGGMRAGLPKYLPVNLKDIAAAGFEEGEEVSLESLKSKGLINPSGRERRLPLKI 283
           PKLRGIAGGMR+GLPKYLPVNLKDI  AGF+EG+EVSLE+LK KGLINPSGRER+LPLKI
Sbjct: 141 PKLRGIAGGMRSGLPKYLPVNLKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLKI 200

Query: 282 LGDGDLSVKLNFKARA 235
           LG G+LS+KL FKARA
Sbjct: 201 LGTGELSMKLTFKARA 216



 Score = 50.1 bits (118), Expect(2) = 4e-64
 Identities = 25/36 (69%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
 Frame = -3

Query: 124 RKKWVKPSVSKNLARAEEYFAKKR-ASPEWSDPPSA 20
           RKKWVKPSV+KN ARA+EYFAKKR A+ E +  P+A
Sbjct: 238 RKKWVKPSVAKNQARADEYFAKKRAAAAEATSEPAA 273


>ref|NP_189221.1| 50S ribosomal protein L15 [Arabidopsis thaliana]
           gi|21431836|sp|P25873.2|RK15_ARATH RecName: Full=50S
           ribosomal protein L15, chloroplastic; AltName:
           Full=CL15; Flags: Precursor
           gi|13877945|gb|AAK44050.1|AF370235_1 putative 50S
           ribosomal protein L15, chloroplast precursor
           [Arabidopsis thaliana]
           gi|15983454|gb|AAL11595.1|AF424601_1 AT3g25920/MPE11_7
           [Arabidopsis thaliana] gi|9279597|dbj|BAB01055.1|
           chloroplast 50S ribosomal protein L15 [Arabidopsis
           thaliana] gi|16323474|gb|AAL15231.1| putative 50S
           ribosomal protein L15, chloroplast precursor
           [Arabidopsis thaliana] gi|21536722|gb|AAM61054.1| 50S
           ribosomal protein L15, chloroplast precursor
           [Arabidopsis thaliana] gi|332643570|gb|AEE77091.1| 50S
           ribosomal protein L15 [Arabidopsis thaliana]
          Length = 277

 Score =  219 bits (558), Expect(2) = 3e-63
 Identities = 120/196 (61%), Positives = 139/196 (70%), Gaps = 3/196 (1%)
 Frame = -1

Query: 813 SFKGNVSNLKTRPTHFVSLNLNRAHDIKISR---KPLVVLNQAASSLPISDDTLVASPRL 643
           SFKGNVS L   P+  +SL LN+    +  +   +PLVV++Q A++       +VA  R 
Sbjct: 26  SFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFARPLVVVSQTAAT----SSAVVAPERF 81

Query: 642 RLDNLGPQPXXXXXXXXXXXXXXXXXXXXXXXGMRGQKSRSGPGIMRGFEGGQMPLYRRL 463
           RLDNLGPQP                       GMRGQKSRSGPGIMRGFEGGQ  LYRRL
Sbjct: 82  RLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRL 141

Query: 462 PKLRGIAGGMRAGLPKYLPVNLKDIAAAGFEEGEEVSLESLKSKGLINPSGRERRLPLKI 283
           PKLRGIAGGMR+GLPKYLPVN+KDI  AGF+EG+EVSLE+LK KGLINPSGRER+LPLKI
Sbjct: 142 PKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLKI 201

Query: 282 LGDGDLSVKLNFKARA 235
           LG G+LS+KL FKARA
Sbjct: 202 LGTGELSMKLTFKARA 217



 Score = 49.7 bits (117), Expect(2) = 3e-63
 Identities = 22/26 (84%), Positives = 25/26 (96%)
 Frame = -3

Query: 124 RKKWVKPSVSKNLARAEEYFAKKRAS 47
           RKKWVKPSV+KN ARA+EYFAKKRA+
Sbjct: 239 RKKWVKPSVAKNQARADEYFAKKRAA 264


>emb|CAA77593.1| Plastid ribosomal protein CL15 [Arabidopsis thaliana]
          Length = 277

 Score =  219 bits (558), Expect(2) = 3e-63
 Identities = 120/196 (61%), Positives = 139/196 (70%), Gaps = 3/196 (1%)
 Frame = -1

Query: 813 SFKGNVSNLKTRPTHFVSLNLNRAHDIKISR---KPLVVLNQAASSLPISDDTLVASPRL 643
           SFKGNVS L   P+  +SL LN+    +  +   +PLVV++Q A++       +VA  R 
Sbjct: 26  SFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFARPLVVVSQTAAT----SSAVVAPERF 81

Query: 642 RLDNLGPQPXXXXXXXXXXXXXXXXXXXXXXXGMRGQKSRSGPGIMRGFEGGQMPLYRRL 463
           RLDNLGPQP                       GMRGQKSRSGPGIMRGFEGGQ  LYRRL
Sbjct: 82  RLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRL 141

Query: 462 PKLRGIAGGMRAGLPKYLPVNLKDIAAAGFEEGEEVSLESLKSKGLINPSGRERRLPLKI 283
           PKLRGIAGGMR+GLPKYLPVN+KDI  AGF+EG+EVSLE+LK KGLINPSGRER+LPLKI
Sbjct: 142 PKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLKI 201

Query: 282 LGDGDLSVKLNFKARA 235
           LG G+LS+KL FKARA
Sbjct: 202 LGTGELSMKLTFKARA 217



 Score = 49.7 bits (117), Expect(2) = 3e-63
 Identities = 22/26 (84%), Positives = 25/26 (96%)
 Frame = -3

Query: 124 RKKWVKPSVSKNLARAEEYFAKKRAS 47
           RKKWVKPSV+KN ARA+EYFAKKRA+
Sbjct: 239 RKKWVKPSVAKNQARADEYFAKKRAA 264