BLASTX nr result

ID: Cnidium21_contig00001555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001555
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81386.1| hypothetical protein VITISV_012325 [Vitis vinifera]    55   2e-12
ref|XP_002281776.1| PREDICTED: two-component response regulator-...    59   3e-10
emb|CBI16234.3| unnamed protein product [Vitis vinifera]               59   3e-10
gb|ABV53463.1| pseudo-response regulator 7 [Castanea sativa]           60   2e-07
ref|XP_002311124.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>emb|CAN81386.1| hypothetical protein VITISV_012325 [Vitis vinifera]
          Length = 240

 Score = 55.5 bits (132), Expect(2) = 2e-12
 Identities = 25/40 (62%), Positives = 34/40 (85%)
 Frame = +3

Query: 387 QQRFPGPVVRWDRFLLVKTLSVLLVENDDSTHHIVTALLR 506
           QQ+  GP+VRW+RFL +++L VLLVEND+ST  +V+ALLR
Sbjct: 188 QQQPQGPIVRWERFLPLRSLKVLLVENDNSTRQVVSALLR 227



 Score = 41.2 bits (95), Expect(2) = 2e-12
 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
 Frame = +1

Query: 163 SF*IWLMGILRVSTNGSPSKGLEEQNPH--DEGRDVRSRVSGEGKRLTEETNS 315
           +F IW M    ++ NG  +KG  E N H  DE +++R +V GEG  L+EE  S
Sbjct: 108 AFSIWFMRSFEMNVNGPWTKGSAELNHHAQDEQKNIRDKVVGEGHGLSEEDES 160


>ref|XP_002281776.1| PREDICTED: two-component response regulator-like PRR73-like [Vitis
           vinifera]
          Length = 785

 Score = 58.9 bits (141), Expect(2) = 3e-10
 Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
 Frame = +3

Query: 318 TNDVAFDANKKC--TFQAQPVPLRKQQRFPGPVVRWDRFLLVKTLSVLLVENDDSTHHIV 491
           +N++  DANK      Q        QQ+  G  + WD FL +++L VLLVENDDST H+V
Sbjct: 51  SNEIIEDANKGSEEAIQVHDGLQNSQQQPQGSAINWDSFLPIRSLKVLLVENDDSTRHVV 110

Query: 492 TALLR 506
           TALLR
Sbjct: 111 TALLR 115



 Score = 30.4 bits (67), Expect(2) = 3e-10
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
 Frame = +1

Query: 181 MGILRVSTNGSPSKGL--EEQNPHDEGRDVRSRVSGEGKRL--TEETNSG 318
           MG ++ + +G    GL   E +  DEG++VR+ + GEG+ L  +EE   G
Sbjct: 1   MGFVQANNDGGGEGGLVNRENSTWDEGKEVRNGMVGEGQGLGSSEEDEPG 50


>emb|CBI16234.3| unnamed protein product [Vitis vinifera]
          Length = 482

 Score = 58.9 bits (141), Expect(2) = 3e-10
 Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
 Frame = +3

Query: 318 TNDVAFDANKKC--TFQAQPVPLRKQQRFPGPVVRWDRFLLVKTLSVLLVENDDSTHHIV 491
           +N++  DANK      Q        QQ+  G  + WD FL +++L VLLVENDDST H+V
Sbjct: 51  SNEIIEDANKGSEEAIQVHDGLQNSQQQPQGSAINWDSFLPIRSLKVLLVENDDSTRHVV 110

Query: 492 TALLR 506
           TALLR
Sbjct: 111 TALLR 115



 Score = 30.4 bits (67), Expect(2) = 3e-10
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
 Frame = +1

Query: 181 MGILRVSTNGSPSKGL--EEQNPHDEGRDVRSRVSGEGKRL--TEETNSG 318
           MG ++ + +G    GL   E +  DEG++VR+ + GEG+ L  +EE   G
Sbjct: 1   MGFVQANNDGGGEGGLVNRENSTWDEGKEVRNGMVGEGQGLGSSEEDEPG 50


>gb|ABV53463.1| pseudo-response regulator 7 [Castanea sativa]
          Length = 784

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/49 (59%), Positives = 37/49 (75%)
 Frame = +3

Query: 360 QAQPVPLRKQQRFPGPVVRWDRFLLVKTLSVLLVENDDSTHHIVTALLR 506
           Q Q V    QQ+   P+VRW+RFL +++L VLLVENDDST H+V+ALLR
Sbjct: 70  QTQVVMQGSQQQHQRPLVRWERFLPLRSLKVLLVENDDSTRHVVSALLR 118


>ref|XP_002311124.1| predicted protein [Populus trichocarpa] gi|222850944|gb|EEE88491.1|
           predicted protein [Populus trichocarpa]
          Length = 711

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/48 (60%), Positives = 38/48 (79%)
 Frame = +3

Query: 363 AQPVPLRKQQRFPGPVVRWDRFLLVKTLSVLLVENDDSTHHIVTALLR 506
           AQ V   +QQ+  GP+V W+RFL +++L VLLVENDDST H+V+ALLR
Sbjct: 10  AQAVIQSQQQQSQGPLVIWERFLPLRSLKVLLVENDDSTRHVVSALLR 57


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