BLASTX nr result
ID: Cnidium21_contig00001546
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00001546
(1765 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635269.1| PREDICTED: polygalacturonase-like [Vitis vin... 112 1e-34
gb|AAC70951.1| polygalacturonase 7 [Solanum lycopersicum] 116 7e-30
ref|NP_191544.2| polygalacturonase [Arabidopsis thaliana] gi|537... 103 8e-28
emb|CAB75804.1| polygalacturonase-like protein [Arabidopsis thal... 103 8e-28
gb|AAC28903.1| polygalacturonase 1 [Solanum lycopersicum] 114 1e-27
>ref|XP_003635269.1| PREDICTED: polygalacturonase-like [Vitis vinifera]
Length = 313
Score = 112 bits (279), Expect(2) = 1e-34
Identities = 51/77 (66%), Positives = 65/77 (84%)
Frame = +1
Query: 793 IGSLGWDLQEPGVQNLTVKSVAFRNSDDGVRIKTWARSSNAFVKNVLFKNIFMSNVKNPI 972
IGSLG DL+E GVQN+TVK+V F S +GVRIK+WAR+SN FVK V+F++I M NV+NPI
Sbjct: 166 IGSLGKDLKEEGVQNVTVKTVTFTGSQNGVRIKSWARASNGFVKRVVFQHILMVNVQNPI 225
Query: 973 LIDQDYCPNSQNCPGKV 1023
+IDQ+YCP +NCPG+V
Sbjct: 226 VIDQNYCPGHKNCPGQV 242
Score = 63.2 bits (152), Expect(2) = 1e-34
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +3
Query: 549 GRYLIRAPIVFSGQNCK-HSMFLRIEGTIVASTDYNVIGKHGNWIKFERVNGLSISGGNI 725
GRYL+ VF G CK H++ RI+ T+VA +DY VIG NW+ F+ V G+SI GG +
Sbjct: 70 GRYLL-LNAVFRG--CKNHAITFRIDATLVAPSDYRVIGNAANWLAFQDVTGVSIIGGVL 126
Query: 726 DAEGAALW 749
D +G LW
Sbjct: 127 DGQGTGLW 134
>gb|AAC70951.1| polygalacturonase 7 [Solanum lycopersicum]
Length = 397
Score = 105 bits (262), Expect(2) = 7e-30
Identities = 48/83 (57%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +3
Query: 546 RGRYLIRAPIVFSGQNCK-HSMFLRIEGTIVASTDYNVIGKHGNWIKFERVNGLSISGGN 722
+G YL+ + F GQ+CK + + + IEGT++A +DYNVIGK GNWIKFERVNG+SI GG
Sbjct: 69 KGSYLLNN-VYFFGQSCKSNDITIHIEGTLIAPSDYNVIGKSGNWIKFERVNGVSIVGGT 127
Query: 723 IDAEGAALWNCKKSGKNCPTGTT 791
+D +G LW CK SGK CP G T
Sbjct: 128 LDGQGTRLWTCKNSGKGCPKGAT 150
Score = 53.5 bits (127), Expect(2) = 7e-30
Identities = 25/47 (53%), Positives = 31/47 (65%)
Frame = +1
Query: 409 SAAARLSINVQILGAKADGKTDVSKVFLGAWNSACASRKPAQIYVPE 549
S+AA NVQ GA +DGK+D S F+ AW +ACAS A IYVP+
Sbjct: 23 SSAANSMYNVQTYGANSDGKSDSSNAFVSAWTAACASTSAATIYVPK 69
Score = 116 bits (291), Expect = 2e-23
Identities = 49/74 (66%), Positives = 66/74 (89%)
Frame = +1
Query: 793 IGSLGWDLQEPGVQNLTVKSVAFRNSDDGVRIKTWARSSNAFVKNVLFKNIFMSNVKNPI 972
IGSLGW++QE GVQN+TVK+ +F +++GVR+KTWAR SN FV+NVLF+++ M+NV+NPI
Sbjct: 248 IGSLGWEMQEAGVQNVTVKTSSFTGTENGVRVKTWARPSNGFVRNVLFQHVVMNNVQNPI 307
Query: 973 LIDQDYCPNSQNCP 1014
+IDQ+YCPNS NCP
Sbjct: 308 IIDQNYCPNSGNCP 321
>ref|NP_191544.2| polygalacturonase [Arabidopsis thaliana] gi|53749142|gb|AAU90056.1|
At3g59850 [Arabidopsis thaliana]
gi|55167900|gb|AAV43782.1| At3g59850 [Arabidopsis
thaliana] gi|332646457|gb|AEE79978.1| polygalacturonase
[Arabidopsis thaliana]
Length = 388
Score = 103 bits (256), Expect(2) = 8e-28
Identities = 46/83 (55%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Frame = +3
Query: 546 RGRYLIRAPIVFSGQNCKH-SMFLRIEGTIVASTDYNVIGKHGNWIKFERVNGLSISGGN 722
+GR+L+R+ I+F G CK S+ RI+GT+VA +DY VIGK WI F+ ++G+S+ GG
Sbjct: 62 KGRFLLRS-IIFDGSKCKRKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGV 120
Query: 723 IDAEGAALWNCKKSGKNCPTGTT 791
+DA+GA+LW+CKKSGKNCP+G T
Sbjct: 121 LDAQGASLWSCKKSGKNCPSGAT 143
Score = 48.9 bits (115), Expect(2) = 8e-28
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +1
Query: 403 SISAAARLSINVQILGAKADGKTDVSKVFLGAWNSACASRKPAQIYVPE 549
S+S+++ + N+ GAK DGKTD +K F W ACAS KP I VP+
Sbjct: 14 SVSSSSAQTYNILSYGAKPDGKTDSTKAFTVLWAKACASVKPVTILVPK 62
Score = 101 bits (251), Expect = 7e-19
Identities = 44/77 (57%), Positives = 61/77 (79%)
Frame = +1
Query: 793 IGSLGWDLQEPGVQNLTVKSVAFRNSDDGVRIKTWARSSNAFVKNVLFKNIFMSNVKNPI 972
IGSLG + E GVQN+TVK+ F +++GVRIK+WAR SN F KN+ F++ M+NV+NPI
Sbjct: 241 IGSLGKESVEVGVQNITVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPI 300
Query: 973 LIDQDYCPNSQNCPGKV 1023
+IDQ+YCP ++NCP +V
Sbjct: 301 VIDQNYCPGNENCPNQV 317
>emb|CAB75804.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 383
Score = 103 bits (256), Expect(2) = 8e-28
Identities = 46/83 (55%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Frame = +3
Query: 546 RGRYLIRAPIVFSGQNCKH-SMFLRIEGTIVASTDYNVIGKHGNWIKFERVNGLSISGGN 722
+GR+L+R+ I+F G CK S+ RI+GT+VA +DY VIGK WI F+ ++G+S+ GG
Sbjct: 62 KGRFLLRS-IIFDGSKCKRKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGV 120
Query: 723 IDAEGAALWNCKKSGKNCPTGTT 791
+DA+GA+LW+CKKSGKNCP+G T
Sbjct: 121 LDAQGASLWSCKKSGKNCPSGAT 143
Score = 48.9 bits (115), Expect(2) = 8e-28
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +1
Query: 403 SISAAARLSINVQILGAKADGKTDVSKVFLGAWNSACASRKPAQIYVPE 549
S+S+++ + N+ GAK DGKTD +K F W ACAS KP I VP+
Sbjct: 14 SVSSSSAQTYNILSYGAKPDGKTDSTKAFTVLWAKACASVKPVTILVPK 62
Score = 101 bits (251), Expect = 7e-19
Identities = 44/77 (57%), Positives = 61/77 (79%)
Frame = +1
Query: 793 IGSLGWDLQEPGVQNLTVKSVAFRNSDDGVRIKTWARSSNAFVKNVLFKNIFMSNVKNPI 972
IGSLG + E GVQN+TVK+ F +++GVRIK+WAR SN F KN+ F++ M+NV+NPI
Sbjct: 236 IGSLGKESVEVGVQNITVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPI 295
Query: 973 LIDQDYCPNSQNCPGKV 1023
+IDQ+YCP ++NCP +V
Sbjct: 296 VIDQNYCPGNENCPNQV 312
>gb|AAC28903.1| polygalacturonase 1 [Solanum lycopersicum]
Length = 392
Score = 95.1 bits (235), Expect(2) = 1e-27
Identities = 48/83 (57%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Frame = +3
Query: 549 GRYLIRAPIVFSGQNCKH-SMFLRIEGTIVASTDYNVIGKHGNWIKFERVNGLSISGGNI 725
G+YLI F+GQ CK ++ + I+GT++A +DYNVIG NWIKFE+VNGLSI GG
Sbjct: 63 GKYLIHNAN-FNGQTCKSKAITMHIDGTLLAPSDYNVIGNEENWIKFEKVNGLSIYGGTF 121
Query: 726 DAEGAALWNCKKS-GKNCPTGTT 791
D + AALW CK S KNCP GTT
Sbjct: 122 DGQAAALWACKNSNNKNCPDGTT 144
Score = 56.6 bits (135), Expect(2) = 1e-27
Identities = 30/47 (63%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +1
Query: 409 SAAARLSI-NVQILGAKADGKTDVSKVFLGAWNSACASRKPAQIYVP 546
S AA +I NVQ GAK+DGKTD SK FL AW +ACAS KP+ I VP
Sbjct: 15 SLAANTNIYNVQNYGAKSDGKTDSSKAFLNAWAAACASNKPSTINVP 61
Score = 114 bits (286), Expect = 6e-23
Identities = 52/76 (68%), Positives = 63/76 (82%)
Frame = +1
Query: 793 IGSLGWDLQEPGVQNLTVKSVAFRNSDDGVRIKTWARSSNAFVKNVLFKNIFMSNVKNPI 972
IGSLGW QE GVQN+TVK+V F + +GVR+KTWAR SN FV+NVLF++I M NVKNPI
Sbjct: 242 IGSLGWKQQELGVQNVTVKTVTFSGTTNGVRVKTWARPSNGFVRNVLFQHIVMVNVKNPI 301
Query: 973 LIDQDYCPNSQNCPGK 1020
+IDQ+YCPN Q+CP K
Sbjct: 302 IIDQNYCPNHQSCPHK 317