BLASTX nr result

ID: Cnidium21_contig00001532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001532
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523967.1| 50S ribosomal protein L3, putative [Ricinus ...   336   5e-90
ref|XP_002319213.1| predicted protein [Populus trichocarpa] gi|2...   332   9e-89
ref|XP_002271466.1| PREDICTED: 50S ribosomal protein L3-1, chlor...   323   3e-86
ref|XP_003522341.1| PREDICTED: 50S ribosomal protein L3-1, chlor...   322   5e-86
ref|XP_004154027.1| PREDICTED: 50S ribosomal protein L3, chlorop...   320   3e-85

>ref|XP_002523967.1| 50S ribosomal protein L3, putative [Ricinus communis]
           gi|223536694|gb|EEF38335.1| 50S ribosomal protein L3,
           putative [Ricinus communis]
          Length = 285

 Score =  336 bits (861), Expect = 5e-90
 Identities = 174/238 (73%), Positives = 187/238 (78%)
 Frame = +1

Query: 1   IGIMGTKLGMMSYFEADGTVVPVTVVGFREGNIVTQVKKESTDGYNAVQVGYRRVRDKKL 180
           IG+MGTKLGMMSYFE+DGTVVPVTVVGFREGNIVTQ+K E+TDGY++VQVGYRR+RD+KL
Sbjct: 70  IGVMGTKLGMMSYFESDGTVVPVTVVGFREGNIVTQIKTEATDGYDSVQVGYRRIRDRKL 129

Query: 181 TKPEMGHLEKSGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVL 360
           TKPE+GHLEK+G+                                             VL
Sbjct: 130 TKPELGHLEKAGVIPMRHLQEFRLQNIDGFEVGQKL----------------------VL 167

Query: 361 EEIFKEGDLVDVSGTTIGKGFQGGIKRWNFKRGLMTHGSKSHRALGSIGAGTTPGRVYKG 540
           EEIFKEGDLVDVSG TIGKGFQGGIKR NFKRG MTHGSKSHRALGSIGAGTTPGRVYKG
Sbjct: 168 EEIFKEGDLVDVSGITIGKGFQGGIKRHNFKRGQMTHGSKSHRALGSIGAGTTPGRVYKG 227

Query: 541 KKMPGRMGGTKQKIRKLKIMKIDNDLRIVMIKGALPGKPGNLLRIAPAKIVGKNIPKS 714
           KKMPGRMGGTK KIRKLKI+KIDNDLR VMIKGALPGKPGNLLRIAPAKIVGKNIPK+
Sbjct: 228 KKMPGRMGGTKTKIRKLKIVKIDNDLRAVMIKGALPGKPGNLLRIAPAKIVGKNIPKN 285


>ref|XP_002319213.1| predicted protein [Populus trichocarpa] gi|222857589|gb|EEE95136.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  332 bits (850), Expect = 9e-89
 Identities = 171/238 (71%), Positives = 186/238 (78%)
 Frame = +1

Query: 1   IGIMGTKLGMMSYFEADGTVVPVTVVGFREGNIVTQVKKESTDGYNAVQVGYRRVRDKKL 180
           +G+MGTKLGMM+YFE +G VVPVTVVGFREGNIVTQ+K ++TDGY+AVQVGYRRVRDKKL
Sbjct: 7   VGVMGTKLGMMTYFEPNGKVVPVTVVGFREGNIVTQIKTDATDGYDAVQVGYRRVRDKKL 66

Query: 181 TKPEMGHLEKSGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVL 360
           TKPEMGHLEK+G+                                             + 
Sbjct: 67  TKPEMGHLEKAGVIPMRHLQEFRLQGLDGFEIGQKL----------------------LF 104

Query: 361 EEIFKEGDLVDVSGTTIGKGFQGGIKRWNFKRGLMTHGSKSHRALGSIGAGTTPGRVYKG 540
           EE+FKEGDLVDVSGTTIGKGFQGGIKR NFKRG M+HGSKSHRALGSIGAGTTPGRVYKG
Sbjct: 105 EELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKG 164

Query: 541 KKMPGRMGGTKQKIRKLKIMKIDNDLRIVMIKGALPGKPGNLLRIAPAKIVGKNIPKS 714
           KKMPGRMGGTK KIRKLKI+KIDNDLR+VMIKGALPGKPGNLLRIAPAKIVGKNIPKS
Sbjct: 165 KKMPGRMGGTKTKIRKLKIVKIDNDLRVVMIKGALPGKPGNLLRIAPAKIVGKNIPKS 222


>ref|XP_002271466.1| PREDICTED: 50S ribosomal protein L3-1, chloroplastic-like [Vitis
           vinifera]
          Length = 281

 Score =  323 bits (828), Expect = 3e-86
 Identities = 168/238 (70%), Positives = 181/238 (76%)
 Frame = +1

Query: 1   IGIMGTKLGMMSYFEADGTVVPVTVVGFREGNIVTQVKKESTDGYNAVQVGYRRVRDKKL 180
           +G+M TKLGMMSYFE +G VVPVTVVGFREGNIVTQVK E+TDGY+AVQVGYRRVRD+KL
Sbjct: 66  VGVMATKLGMMSYFEPEGKVVPVTVVGFREGNIVTQVKTEATDGYSAVQVGYRRVRDRKL 125

Query: 181 TKPEMGHLEKSGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVL 360
           TKPEMGHLEK+G                                              V 
Sbjct: 126 TKPEMGHLEKAGTIPMRHLQEFRLVSVDGFEPNQKL----------------------VF 163

Query: 361 EEIFKEGDLVDVSGTTIGKGFQGGIKRWNFKRGLMTHGSKSHRALGSIGAGTTPGRVYKG 540
           EE+FKEGDLVDVSG TIGKGFQGGIKR NF+RG MTHGSKSHRALGSIGAGTTPG VYKG
Sbjct: 164 EELFKEGDLVDVSGITIGKGFQGGIKRHNFRRGPMTHGSKSHRALGSIGAGTTPGHVYKG 223

Query: 541 KKMPGRMGGTKQKIRKLKIMKIDNDLRIVMIKGALPGKPGNLLRIAPAKIVGKNIPKS 714
           KKMPGRMGGTK KIRKLKI+KIDNDLR+VMIKGA+PGKPGNLLRI PAKIVGKNIPK+
Sbjct: 224 KKMPGRMGGTKTKIRKLKIVKIDNDLRVVMIKGAVPGKPGNLLRITPAKIVGKNIPKN 281


>ref|XP_003522341.1| PREDICTED: 50S ribosomal protein L3-1, chloroplastic-like [Glycine
           max]
          Length = 263

 Score =  322 bits (826), Expect = 5e-86
 Identities = 167/238 (70%), Positives = 182/238 (76%)
 Frame = +1

Query: 1   IGIMGTKLGMMSYFEADGTVVPVTVVGFREGNIVTQVKKESTDGYNAVQVGYRRVRDKKL 180
           IG+MGTKLGMMSYFE+DG VVPVTVVGF+EGNIVTQ+K E+TDGY+AVQVGYRRVRD+KL
Sbjct: 48  IGVMGTKLGMMSYFESDGEVVPVTVVGFKEGNIVTQIKTEATDGYDAVQVGYRRVRDRKL 107

Query: 181 TKPEMGHLEKSGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVL 360
           TKPE+GHL+K G                                              V 
Sbjct: 108 TKPEIGHLQKVGAIPMRHLQEFRLQAIDGFDLNQRL----------------------VF 145

Query: 361 EEIFKEGDLVDVSGTTIGKGFQGGIKRWNFKRGLMTHGSKSHRALGSIGAGTTPGRVYKG 540
           +EIFKEGDLVDVSGTTIGKGFQGGIKR NFKRG MTHGSKSHR LGSIGAGTTPGRVYKG
Sbjct: 146 DEIFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMTHGSKSHRQLGSIGAGTTPGRVYKG 205

Query: 541 KKMPGRMGGTKQKIRKLKIMKIDNDLRIVMIKGALPGKPGNLLRIAPAKIVGKNIPKS 714
           KKMPGRMGGTK+KIRKLKI+KID DL +VMIKGA+PGKPGNLLRI PAKIVGKNIPK+
Sbjct: 206 KKMPGRMGGTKRKIRKLKIVKIDKDLNVVMIKGAVPGKPGNLLRITPAKIVGKNIPKN 263


>ref|XP_004154027.1| PREDICTED: 50S ribosomal protein L3, chloroplastic-like [Cucumis
           sativus]
          Length = 294

 Score =  320 bits (819), Expect = 3e-85
 Identities = 166/238 (69%), Positives = 182/238 (76%)
 Frame = +1

Query: 1   IGIMGTKLGMMSYFEADGTVVPVTVVGFREGNIVTQVKKESTDGYNAVQVGYRRVRDKKL 180
           IG+M TKLGMMS+FE DG VVPVTVVGF+EGNIVTQVK ++TDGY+AVQVGYRRVRD+KL
Sbjct: 79  IGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTDATDGYSAVQVGYRRVRDRKL 138

Query: 181 TKPEMGHLEKSGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVL 360
           TKPE+GHLEK+G                                              V 
Sbjct: 139 TKPELGHLEKAGAIPMRHLQEFRLESVDAFEPNQRL----------------------VF 176

Query: 361 EEIFKEGDLVDVSGTTIGKGFQGGIKRWNFKRGLMTHGSKSHRALGSIGAGTTPGRVYKG 540
            E+FKEGDLVDVSGTTIGKGFQGGIKR NFKRG M+HGSKSHRALGSIGAGTTPGRVYKG
Sbjct: 177 NELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKG 236

Query: 541 KKMPGRMGGTKQKIRKLKIMKIDNDLRIVMIKGALPGKPGNLLRIAPAKIVGKNIPKS 714
           KKMPGRMGGTK+KIRKLKI+KID DL +VMIKGA+PGKPGNLLRIAPAKIVG+NIPKS
Sbjct: 237 KKMPGRMGGTKRKIRKLKIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGQNIPKS 294


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